RNA–Protein interactions for RNA: ENST00000532771.5

SYVN1-214, Transcript of synoviolin 1, humanhuman

TSL 3

Gene SYVN1, Length 709 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYVN1-214ENST00000532771 FYCO1Q9BQS8 1478 aa15.48■□□□□ 0.07
SYVN1-214ENST00000532771 MAGI2Q86UL8 1455 aa15.47■□□□□ 0.07
SYVN1-214ENST00000532771 ZFYVE16Q7Z3T8 1539 aa15.47■□□□□ 0.07
SYVN1-214ENST00000532771 ARID4BQ4LE39 1312 aaPredicted RBP15.46■□□□□ 0.07
SYVN1-214ENST00000532771 BCORL1Q5H9F3 1711 aa15.46■□□□□ 0.06
SYVN1-214ENST00000532771 YEATS2Q9ULM3 1422 aa15.45■□□□□ 0.06
SYVN1-214ENST00000532771 ARHGAP5Q13017 1502 aa15.45■□□□□ 0.06
SYVN1-214ENST00000532771 HECW2Q9P2P5 1572 aa15.44■□□□□ 0.06
SYVN1-214ENST00000532771 PTPRMP28827 1452 aa15.43■□□□□ 0.06
SYVN1-214ENST00000532771 ZNF518AQ6AHZ1 1483 aa15.4■□□□□ 0.06
SYVN1-214ENST00000532771 PREX2Q70Z35 1606 aa15.4■□□□□ 0.06
SYVN1-214ENST00000532771 MADDQ8WXG6 1647 aa15.4■□□□□ 0.06
SYVN1-214ENST00000532771 CDC42BPBQ9Y5S2 1711 aa15.4■□□□□ 0.06
SYVN1-214ENST00000532771 KDM5CP41229 1560 aa15.39■□□□□ 0.05
SYVN1-214ENST00000532771 SIGLEC1Q9BZZ2 1709 aa15.38■□□□□ 0.05
SYVN1-214ENST00000532771 AFAP1Q8N556 730 aa15.38■□□□□ 0.05
SYVN1-214ENST00000532771 ATP10AO60312 1499 aa15.38■□□□□ 0.05
SYVN1-214ENST00000532771 CEP162Q5TB80 1403 aa15.37■□□□□ 0.05
SYVN1-214ENST00000532771 C9orf84Q5VXU9 1444 aa15.36■□□□□ 0.05
SYVN1-214ENST00000532771 ABCC1P33527 1531 aa15.36■□□□□ 0.05
SYVN1-214ENST00000532771 CDC42BPAQ5VT25 1732 aa15.35■□□□□ 0.05
SYVN1-214ENST00000532771 ARHGEF12Q9NZN5 1544 aa15.35■□□□□ 0.05
SYVN1-214ENST00000532771 RIMS1Q86UR5 1692 aaKnown RBP15.34■□□□□ 0.05
SYVN1-214ENST00000532771 TRAPPC8Q9Y2L5 1435 aa15.34■□□□□ 0.05
SYVN1-214ENST00000532771 MLH3Q9UHC1 1453 aa15.33■□□□□ 0.05
SYVN1-214ENST00000532771 GPATCH8Q9UKJ3 1502 aaKnown RBP15.33■□□□□ 0.05
SYVN1-214ENST00000532771 MTUS2Q5JR59 1369 aa15.32■□□□□ 0.04
SYVN1-214ENST00000532771 ITSN2Q9NZM3 1697 aa15.32■□□□□ 0.04
SYVN1-214ENST00000532771 MLECQ14165 292 aa15.31■□□□□ 0.04
SYVN1-214ENST00000532771 DIP2CQ9Y2E4 1556 aa15.31■□□□□ 0.04
SYVN1-214ENST00000532771 REREQ9P2R6 1566 aa15.3■□□□□ 0.04
SYVN1-214ENST00000532771 MYT1LQ9UL68 1186 aa15.3■□□□□ 0.04
SYVN1-214ENST00000532771 SAMD9LQ8IVG5 1584 aa15.29■□□□□ 0.04
SYVN1-214ENST00000532771 CCNB3Q8WWL7 1395 aa15.29■□□□□ 0.04
SYVN1-214ENST00000532771 ZNF777Q9ULD5 760 aaPredicted RBP15.29■□□□□ 0.04
SYVN1-214ENST00000532771 ABCA6Q8N139 1617 aa15.28■□□□□ 0.04
SYVN1-214ENST00000532771 FER1L4A9Z1Z3 1794 aa15.28■□□□□ 0.04
SYVN1-214ENST00000532771 EHBP1L1Q8N3D4 1523 aa15.27■□□□□ 0.04
SYVN1-214ENST00000532771 LMTK3Q96Q04 1460 aa15.27■□□□□ 0.04
SYVN1-214ENST00000532771 CFDP1Q9UEE9 299 aaPredicted RBP15.27■□□□□ 0.04
SYVN1-214ENST00000532771 SYCP2Q9BX26 1530 aa15.27■□□□□ 0.03
SYVN1-214ENST00000532771 KIAA1107Q9UPP5 1409 aa15.26■□□□□ 0.03
SYVN1-214ENST00000532771 LOC105371045A0A1W2PR82 267 aa15.26■□□□□ 0.03
SYVN1-214ENST00000532771 KIDINS220Q9ULH0 1771 aa15.26■□□□□ 0.03
SYVN1-214ENST00000532771 PLEKHH2Q8IVE3 1493 aa15.26■□□□□ 0.03
SYVN1-214ENST00000532771 AGLP35573 1532 aa15.25■□□□□ 0.03
SYVN1-214ENST00000532771 HNRNPMP52272 730 aaKnown RBP eCLIP15.24■□□□□ 0.03
SYVN1-214ENST00000532771 PLPPR3Q6T4P5 718 aa15.24■□□□□ 0.03
SYVN1-214ENST00000532771 TIAM1Q13009 1591 aa15.24■□□□□ 0.03
SYVN1-214ENST00000532771 SPAG9O60271 1321 aaKnown RBP15.22■□□□□ 0.03
SYVN1-214ENST00000532771 VPS8Q8N3P4 1428 aa15.21■□□□□ 0.03
SYVN1-214ENST00000532771 ATP7AQ04656 1500 aa15.19■□□□□ 0.02
SYVN1-214ENST00000532771 NCOA2Q15596 1464 aa15.19■□□□□ 0.02
SYVN1-214ENST00000532771 INO80Q9ULG1 1556 aaPredicted RBP15.19■□□□□ 0.02
SYVN1-214ENST00000532771 ZNF644Q9H582 1327 aaPredicted RBP15.18■□□□□ 0.02
SYVN1-214ENST00000532771 CEBPAP49715 358 aaPredicted RBP15.18■□□□□ 0.02
SYVN1-214ENST00000532771 MBD5Q9P267 1494 aa15.18■□□□□ 0.02
SYVN1-214ENST00000532771 SUPT6HQ7KZ85 1726 aaKnown RBP15.17■□□□□ 0.02
SYVN1-214ENST00000532771 HSPA2P54652 639 aa15.17■□□□□ 0.02
SYVN1-214ENST00000532771 ILDR1Q86SU0 546 aaPredicted RBP15.16■□□□□ 0.02
SYVN1-214ENST00000532771 ESF1Q9H501 851 aaKnown RBP15.15■□□□□ 0.02
SYVN1-214ENST00000532771 CNTLNQ9NXG0 1405 aa15.15■□□□□ 0.02
SYVN1-214ENST00000532771 PLXNC1O60486 1568 aa15.15■□□□□ 0.02
SYVN1-214ENST00000532771 A2MP01023 1474 aa15.14■□□□□ 0.01
SYVN1-214ENST00000532771 LRRC9Q6ZRR7 1453 aa15.14■□□□□ 0.01
SYVN1-214ENST00000532771 PREX1Q8TCU6 1659 aa15.14■□□□□ 0.01
SYVN1-214ENST00000532771 MAP3K1Q13233 1512 aa15.13■□□□□ 0.01
SYVN1-214ENST00000532771 RTEL1-TNFRSF6BF6WH68 1400 aa15.13■□□□□ 0.01
SYVN1-214ENST00000532771 C3P01024 1663 aa15.12■□□□□ 0.01
SYVN1-214ENST00000532771 CAMSAP2Q08AD1 1489 aa15.12■□□□□ 0.01
SYVN1-214ENST00000532771 UHRF1BP1Q6BDS2 1440 aa15.11■□□□□ 0.01
SYVN1-214ENST00000532771 SETD1BQ9UPS6 1966 aaKnown RBP15.11■□□□□ 0.01
SYVN1-214ENST00000532771 ADGBQ8N7X0 1667 aa15.1■□□□□ 0.01
SYVN1-214ENST00000532771 CCDC141Q6ZP82 1450 aa15.1■□□□□ 0.01
SYVN1-214ENST00000532771 RSPH4AQ5TD94 716 aa15.1■□□□□ 0.01
SYVN1-214ENST00000532771 KANK4Q5T7N3 995 aaPredicted RBP15.08■□□□□ 0
SYVN1-214ENST00000532771 MROH2AA6NES4 1674 aa15.08■□□□□ 0
SYVN1-214ENST00000532771 ZMYM3Q14202 1370 aa15.07■□□□□ 0
SYVN1-214ENST00000532771 NPATQ14207 1427 aa15.07■□□□□ 0
SYVN1-214ENST00000532771 ARHGEF5Q12774 1597 aa15.07■□□□□ 0
SYVN1-214ENST00000532771 PPP6R1Q9UPN7 881 aa15.06■□□□□ 0
SYVN1-214ENST00000532771 DHX29Q7Z478 1369 aaKnown RBP15.06■□□□□ 0
SYVN1-214ENST00000532771 GGT6Q6P531 493 aa15.05■□□□□ -0
SYVN1-214ENST00000532771 CLTCQ00610 1675 aaKnown RBP15.03■□□□□ -0
SYVN1-214ENST00000532771 MYOM3Q5VTT5 1437 aa15.03■□□□□ -0
SYVN1-214ENST00000532771 MIA2Q96PC5 1412 aa15.03■□□□□ -0
SYVN1-214ENST00000532771 TSPY4P0CV99 314 aa15.02■□□□□ -0
SYVN1-214ENST00000532771 TSPY10P0CW01 314 aa15.02■□□□□ -0
SYVN1-214ENST00000532771 FBXO41Q8TF61 875 aa15.02■□□□□ -0
SYVN1-214ENST00000532771 STRCQ7RTU9 1775 aa15.01□□□□□ -0.01
SYVN1-214ENST00000532771 DMRT2Q9Y5R5 561 aa15.01□□□□□ -0.01
SYVN1-214ENST00000532771 PTPRKQ15262 1439 aa15□□□□□ -0.01
SYVN1-214ENST00000532771 KIF3BO15066 747 aa15□□□□□ -0.01
SYVN1-214ENST00000532771 APLP2Q06481 763 aa15□□□□□ -0.01
SYVN1-214ENST00000532771 MAST1Q9Y2H9 1570 aa14.98□□□□□ -0.01
SYVN1-214ENST00000532771 FAM135AQ9P2D6 1515 aa14.98□□□□□ -0.01
SYVN1-214ENST00000532771 NCOA1Q15788 1441 aa14.97□□□□□ -0.01
SYVN1-214ENST00000532771 PTPRTO14522 1441 aa14.96□□□□□ -0.01
SYVN1-214ENST00000532771 KDM5DQ9BY66 1539 aa14.96□□□□□ -0.02
SYVN1-214ENST00000532771 MYO3AQ8NEV4 1616 aa14.95□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 83.8 ms