RNA–Protein interactions for RNA: ENST00000532354.1

CAVIN3-204, Transcript of caveolae associated protein 3, humanhuman

TSL 2

Gene CAVIN3, Length 1,025 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAVIN3-204ENST00000532354 POGZQ7Z3K3 1410 aa26.75■■□□□ 1.87
CAVIN3-204ENST00000532354 MAGI2Q86UL8 1455 aa26.74■■□□□ 1.87
CAVIN3-204ENST00000532354 YEATS2Q9ULM3 1422 aa26.74■■□□□ 1.87
CAVIN3-204ENST00000532354 BCORL1Q5H9F3 1711 aa26.73■■□□□ 1.87
CAVIN3-204ENST00000532354 HECW2Q9P2P5 1572 aa26.73■■□□□ 1.87
CAVIN3-204ENST00000532354 FYCO1Q9BQS8 1478 aa26.73■■□□□ 1.87
CAVIN3-204ENST00000532354 ZFYVE16Q7Z3T8 1539 aa26.72■■□□□ 1.87
CAVIN3-204ENST00000532354 PTPRMP28827 1452 aa26.71■■□□□ 1.87
CAVIN3-204ENST00000532354 ARHGAP5Q13017 1502 aa26.7■■□□□ 1.86
CAVIN3-204ENST00000532354 MADDQ8WXG6 1647 aa26.65■■□□□ 1.86
CAVIN3-204ENST00000532354 AFAP1Q8N556 730 aa26.65■■□□□ 1.86
CAVIN3-204ENST00000532354 CDC42BPBQ9Y5S2 1711 aa26.64■■□□□ 1.85
CAVIN3-204ENST00000532354 ZNF518AQ6AHZ1 1483 aa26.62■■□□□ 1.85
CAVIN3-204ENST00000532354 SIGLEC1Q9BZZ2 1709 aa26.62■■□□□ 1.85
CAVIN3-204ENST00000532354 ATP10AO60312 1499 aa26.62■■□□□ 1.85
CAVIN3-204ENST00000532354 ILDR1Q86SU0 546 aaPredicted RBP26.6■■□□□ 1.85
CAVIN3-204ENST00000532354 PREX2Q70Z35 1606 aa26.6■■□□□ 1.85
CAVIN3-204ENST00000532354 KDM5CP41229 1560 aa26.58■■□□□ 1.85
CAVIN3-204ENST00000532354 MLECQ14165 292 aa26.56■■□□□ 1.84
CAVIN3-204ENST00000532354 C9orf84Q5VXU9 1444 aa26.56■■□□□ 1.84
CAVIN3-204ENST00000532354 ARHGEF12Q9NZN5 1544 aa26.55■■□□□ 1.84
CAVIN3-204ENST00000532354 RIMS1Q86UR5 1692 aaKnown RBP26.55■■□□□ 1.84
CAVIN3-204ENST00000532354 CEP162Q5TB80 1403 aa26.55■■□□□ 1.84
CAVIN3-204ENST00000532354 TRAPPC8Q9Y2L5 1435 aa26.54■■□□□ 1.84
CAVIN3-204ENST00000532354 CDC42BPAQ5VT25 1732 aa26.53■■□□□ 1.84
CAVIN3-204ENST00000532354 ABCC1P33527 1531 aa26.53■■□□□ 1.84
CAVIN3-204ENST00000532354 MYT1LQ9UL68 1186 aa26.52■■□□□ 1.84
CAVIN3-204ENST00000532354 GPATCH8Q9UKJ3 1502 aaKnown RBP26.51■■□□□ 1.83
CAVIN3-204ENST00000532354 MLH3Q9UHC1 1453 aa26.5■■□□□ 1.83
CAVIN3-204ENST00000532354 ZNF777Q9ULD5 760 aaPredicted RBP26.49■■□□□ 1.83
CAVIN3-204ENST00000532354 MTUS2Q5JR59 1369 aa26.48■■□□□ 1.83
CAVIN3-204ENST00000532354 ITSN2Q9NZM3 1697 aa26.47■■□□□ 1.83
CAVIN3-204ENST00000532354 DIP2CQ9Y2E4 1556 aa26.46■■□□□ 1.83
CAVIN3-204ENST00000532354 LOC105371045A0A1W2PR82 267 aa26.46■■□□□ 1.83
CAVIN3-204ENST00000532354 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
CAVIN3-204ENST00000532354 CCNB3Q8WWL7 1395 aa26.44■■□□□ 1.82
CAVIN3-204ENST00000532354 SAMD9LQ8IVG5 1584 aa26.43■■□□□ 1.82
CAVIN3-204ENST00000532354 CFDP1Q9UEE9 299 aaPredicted RBP26.43■■□□□ 1.82
CAVIN3-204ENST00000532354 FER1L4A9Z1Z3 1794 aa26.43■■□□□ 1.82
CAVIN3-204ENST00000532354 LMTK3Q96Q04 1460 aa26.42■■□□□ 1.82
CAVIN3-204ENST00000532354 HNRNPMP52272 730 aaKnown RBP eCLIP26.42■■□□□ 1.82
CAVIN3-204ENST00000532354 ABCA6Q8N139 1617 aa26.42■■□□□ 1.82
CAVIN3-204ENST00000532354 REREQ9P2R6 1566 aa26.41■■□□□ 1.82
CAVIN3-204ENST00000532354 KIDINS220Q9ULH0 1771 aa26.38■■□□□ 1.81
CAVIN3-204ENST00000532354 SYCP2Q9BX26 1530 aa26.38■■□□□ 1.81
CAVIN3-204ENST00000532354 KIAA1107Q9UPP5 1409 aa26.38■■□□□ 1.81
CAVIN3-204ENST00000532354 EHBP1L1Q8N3D4 1523 aa26.36■■□□□ 1.81
CAVIN3-204ENST00000532354 AGLP35573 1532 aa26.35■■□□□ 1.81
CAVIN3-204ENST00000532354 PLEKHH2Q8IVE3 1493 aa26.35■■□□□ 1.81
CAVIN3-204ENST00000532354 SPAG9O60271 1321 aaKnown RBP26.35■■□□□ 1.81
CAVIN3-204ENST00000532354 CEBPAP49715 358 aaPredicted RBP26.34■■□□□ 1.81
CAVIN3-204ENST00000532354 HSPA2P54652 639 aa26.32■■□□□ 1.8
CAVIN3-204ENST00000532354 TIAM1Q13009 1591 aa26.32■■□□□ 1.8
CAVIN3-204ENST00000532354 ZNF644Q9H582 1327 aaPredicted RBP26.31■■□□□ 1.8
CAVIN3-204ENST00000532354 VPS8Q8N3P4 1428 aa26.26■■□□□ 1.79
CAVIN3-204ENST00000532354 ATP7AQ04656 1500 aa26.24■■□□□ 1.79
CAVIN3-204ENST00000532354 ESF1Q9H501 851 aaKnown RBP26.24■■□□□ 1.79
CAVIN3-204ENST00000532354 NCOA2Q15596 1464 aa26.23■■□□□ 1.79
CAVIN3-204ENST00000532354 MBD5Q9P267 1494 aa26.23■■□□□ 1.79
CAVIN3-204ENST00000532354 INO80Q9ULG1 1556 aaPredicted RBP26.22■■□□□ 1.79
CAVIN3-204ENST00000532354 FBXO41Q8TF61 875 aa26.21■■□□□ 1.79
CAVIN3-204ENST00000532354 SUPT6HQ7KZ85 1726 aaKnown RBP26.2■■□□□ 1.79
CAVIN3-204ENST00000532354 PREX1Q8TCU6 1659 aa26.19■■□□□ 1.78
CAVIN3-204ENST00000532354 A2MP01023 1474 aa26.18■■□□□ 1.78
CAVIN3-204ENST00000532354 CNTLNQ9NXG0 1405 aa26.17■■□□□ 1.78
CAVIN3-204ENST00000532354 C3P01024 1663 aa26.17■■□□□ 1.78
CAVIN3-204ENST00000532354 LRRC9Q6ZRR7 1453 aa26.16■■□□□ 1.78
CAVIN3-204ENST00000532354 PLXNC1O60486 1568 aa26.16■■□□□ 1.78
CAVIN3-204ENST00000532354 SETD1BQ9UPS6 1966 aaKnown RBP26.15■■□□□ 1.78
CAVIN3-204ENST00000532354 RTEL1-TNFRSF6BF6WH68 1400 aa26.14■■□□□ 1.78
CAVIN3-204ENST00000532354 UHRF1BP1Q6BDS2 1440 aa26.14■■□□□ 1.77
CAVIN3-204ENST00000532354 CAMSAP2Q08AD1 1489 aa26.12■■□□□ 1.77
CAVIN3-204ENST00000532354 KANK4Q5T7N3 995 aaPredicted RBP26.12■■□□□ 1.77
CAVIN3-204ENST00000532354 MAP3K1Q13233 1512 aa26.11■■□□□ 1.77
CAVIN3-204ENST00000532354 RSPH4AQ5TD94 716 aa26.11■■□□□ 1.77
CAVIN3-204ENST00000532354 ADGBQ8N7X0 1667 aa26.09■■□□□ 1.77
CAVIN3-204ENST00000532354 ZMYM3Q14202 1370 aa26.09■■□□□ 1.77
CAVIN3-204ENST00000532354 GGT6Q6P531 493 aa26.09■■□□□ 1.77
CAVIN3-204ENST00000532354 CCDC141Q6ZP82 1450 aa26.09■■□□□ 1.77
CAVIN3-204ENST00000532354 DHX29Q7Z478 1369 aaKnown RBP26.07■■□□□ 1.76
CAVIN3-204ENST00000532354 MROH2AA6NES4 1674 aa26.06■■□□□ 1.76
CAVIN3-204ENST00000532354 PPP6R1Q9UPN7 881 aa26.05■■□□□ 1.76
CAVIN3-204ENST00000532354 NPATQ14207 1427 aa26.03■■□□□ 1.76
CAVIN3-204ENST00000532354 CLTCQ00610 1675 aaKnown RBP26.02■■□□□ 1.76
CAVIN3-204ENST00000532354 TSPY4P0CV99 314 aa26.01■■□□□ 1.75
CAVIN3-204ENST00000532354 TSPY10P0CW01 314 aa26.01■■□□□ 1.75
CAVIN3-204ENST00000532354 ARHGEF5Q12774 1597 aa26.01■■□□□ 1.75
CAVIN3-204ENST00000532354 STRCQ7RTU9 1775 aa26■■□□□ 1.75
CAVIN3-204ENST00000532354 DMRT2Q9Y5R5 561 aa26■■□□□ 1.75
CAVIN3-204ENST00000532354 KIF3BO15066 747 aa25.98■■□□□ 1.75
CAVIN3-204ENST00000532354 MYOM3Q5VTT5 1437 aa25.97■■□□□ 1.75
CAVIN3-204ENST00000532354 PTPRKQ15262 1439 aa25.96■■□□□ 1.75
CAVIN3-204ENST00000532354 MIA2Q96PC5 1412 aa25.96■■□□□ 1.75
CAVIN3-204ENST00000532354 APLP2Q06481 763 aa25.95■■□□□ 1.74
CAVIN3-204ENST00000532354 CERKQ8TCT0 537 aa25.93■■□□□ 1.74
CAVIN3-204ENST00000532354 PTPRTO14522 1441 aa25.89■■□□□ 1.74
CAVIN3-204ENST00000532354 NCOA1Q15788 1441 aa25.88■■□□□ 1.73
CAVIN3-204ENST00000532354 MAST1Q9Y2H9 1570 aa25.88■■□□□ 1.73
CAVIN3-204ENST00000532354 WASHC2CQ9Y4E1 1318 aa25.86■■□□□ 1.73
CAVIN3-204ENST00000532354 CAMSAP1Q5T5Y3 1602 aa25.85■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms