RNA–Protein interactions for RNA: ENST00000532347.1

KNL1-209, Transcript of kinetochore scaffold 1, humanhuman

TSL 4

Gene KNL1, Length 564 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KNL1-209ENST00000532347 C7P10643 843 aa16.61■□□□□ 0.25
KNL1-209ENST00000532347 MFSD10Q14728 455 aa16.61■□□□□ 0.25
KNL1-209ENST00000532347 TMEM121BQ9BXQ6 578 aaPredicted RBP16.6■□□□□ 0.25
KNL1-209ENST00000532347 E2F4Q16254 413 aa16.58■□□□□ 0.24
KNL1-209ENST00000532347 DDX27Q96GQ7 796 aaKnown RBP16.58■□□□□ 0.24
KNL1-209ENST00000532347 METRNQ9UJH8 293 aa16.58■□□□□ 0.24
KNL1-209ENST00000532347 POTEFA5A3E0 1075 aa16.57■□□□□ 0.24
KNL1-209ENST00000532347 G3V3G9 751 aa16.57■□□□□ 0.24
KNL1-209ENST00000532347 GPHNQ9NQX3 736 aaPredicted RBP16.56■□□□□ 0.24
KNL1-209ENST00000532347 L3MBTL3Q96JM7 780 aaPredicted RBP16.55■□□□□ 0.24
KNL1-209ENST00000532347 TMC2Q8TDI7 906 aa16.49■□□□□ 0.23
KNL1-209ENST00000532347 PPP1R15BQ5SWA1 713 aa16.48■□□□□ 0.23
KNL1-209ENST00000532347 ARHGEF1Q92888 912 aaKnown RBP16.48■□□□□ 0.23
KNL1-209ENST00000532347 CAMK2BQ13554 666 aa16.45■□□□□ 0.22
KNL1-209ENST00000532347 DSG2Q14126 1118 aa16.45■□□□□ 0.22
KNL1-209ENST00000532347 C2orf72A6NCS6 295 aa16.43■□□□□ 0.22
KNL1-209ENST00000532347 KIF3CO14782 793 aa16.42■□□□□ 0.22
KNL1-209ENST00000532347 FOXK1P85037 733 aa16.41■□□□□ 0.22
KNL1-209ENST00000532347 TMEM92Q6UXU6 159 aa16.4■□□□□ 0.22
KNL1-209ENST00000532347 PRKCSHP14314 528 aaPredicted RBP16.37■□□□□ 0.21
KNL1-209ENST00000532347 ARIH1Q9Y4X5 557 aaPredicted RBP16.36■□□□□ 0.21
KNL1-209ENST00000532347 TPRNQ4KMQ1 711 aa16.35■□□□□ 0.21
KNL1-209ENST00000532347 PLPP6Q8IY26 295 aa16.35■□□□□ 0.21
KNL1-209ENST00000532347 LHX8Q68G74 356 aa16.34■□□□□ 0.21
KNL1-209ENST00000532347 C3orf67Q6ZVT6 689 aa16.34■□□□□ 0.21
KNL1-209ENST00000532347 EMILIN3Q9NT22 766 aa16.32■□□□□ 0.2
KNL1-209ENST00000532347 SEMA3EO15041 775 aa16.3■□□□□ 0.2
KNL1-209ENST00000532347 DPYSL4O14531 572 aa16.25■□□□□ 0.19
KNL1-209ENST00000532347 TESPA1A2RU30 521 aaPredicted RBP16.24■□□□□ 0.19
KNL1-209ENST00000532347 EIF2AK3Q9NZJ5 1116 aaKnown RBP16.22■□□□□ 0.19
KNL1-209ENST00000532347 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.21■□□□□ 0.19
KNL1-209ENST00000532347 CCDC180Q9P1Z9 1646 aa16.19■□□□□ 0.18
KNL1-209ENST00000532347 TULP1O00294 542 aaPredicted RBP16.18■□□□□ 0.18
KNL1-209ENST00000532347 POTEJP0CG39 1038 aa16.18■□□□□ 0.18
KNL1-209ENST00000532347 LMOD2Q6P5Q4 547 aa16.18■□□□□ 0.18
KNL1-209ENST00000532347 POTEB2H3BUK9 544 aa16.17■□□□□ 0.18
KNL1-209ENST00000532347 PDIA6Q15084 440 aa16.16■□□□□ 0.18
KNL1-209ENST00000532347 UPF1Q92900 1129 aaKnown RBP eCLIP16.15■□□□□ 0.18
KNL1-209ENST00000532347 SPDYE16A6NNV3 312 aaPredicted RBP16.14■□□□□ 0.17
KNL1-209ENST00000532347 OXER1Q8TDS5 423 aa16.14■□□□□ 0.17
KNL1-209ENST00000532347 ABCC9O60706 1549 aa16.14■□□□□ 0.17
KNL1-209ENST00000532347 MAP3K9P80192 1104 aa16.13■□□□□ 0.17
KNL1-209ENST00000532347 MLLT3P42568 568 aaPredicted RBP16.11■□□□□ 0.17
KNL1-209ENST00000532347 SMYD5Q6GMV2 418 aa16.1■□□□□ 0.17
KNL1-209ENST00000532347 PTCD2Q8WV60 388 aaKnown RBP16.05■□□□□ 0.16
KNL1-209ENST00000532347 SLC34A2O95436 690 aa16.04■□□□□ 0.16
KNL1-209ENST00000532347 TBC1D12O60347 775 aa16.01■□□□□ 0.15
KNL1-209ENST00000532347 MAMSTRQ6ZN01 415 aa16■□□□□ 0.15
KNL1-209ENST00000532347 SCUBE2Q9NQ36 999 aa16■□□□□ 0.15
KNL1-209ENST00000532347 SLAIN1Q8ND83 568 aa15.99■□□□□ 0.15
KNL1-209ENST00000532347 EVI5O60447 810 aa15.98■□□□□ 0.15
KNL1-209ENST00000532347 RBM26Q5T8P6 1007 aaKnown RBP15.97■□□□□ 0.15
KNL1-209ENST00000532347 ZC3H15Q8WU90 426 aaKnown RBP15.96■□□□□ 0.15
KNL1-209ENST00000532347 GRXCR2A6NFK2 248 aa15.94■□□□□ 0.14
KNL1-209ENST00000532347 PTGER2P43116 358 aa15.93■□□□□ 0.14
KNL1-209ENST00000532347 PCDHGA4Q9Y5G9 962 aa15.93■□□□□ 0.14
KNL1-209ENST00000532347 ZNF316A6NFI3 1004 aaPredicted RBP15.91■□□□□ 0.14
KNL1-209ENST00000532347 DDX12PQ92771 950 aa15.91■□□□□ 0.14
KNL1-209ENST00000532347 HOXB3P14651 431 aaPredicted RBP15.89■□□□□ 0.13
KNL1-209ENST00000532347 ANO8Q9HCE9 1232 aaPredicted RBP15.89■□□□□ 0.13
KNL1-209ENST00000532347 DOK7Q18PE1 504 aa15.87■□□□□ 0.13
KNL1-209ENST00000532347 OSBPP22059 807 aa15.86■□□□□ 0.13
KNL1-209ENST00000532347 GPIHBP1Q8IV16 184 aa15.86■□□□□ 0.13
KNL1-209ENST00000532347 KDM4FA0A1W2PPD8 638 aa15.83■□□□□ 0.12
KNL1-209ENST00000532347 ZMYND10O75800 440 aa15.82■□□□□ 0.12
KNL1-209ENST00000532347 OTUD5Q96G74 571 aa15.8■□□□□ 0.12
KNL1-209ENST00000532347 RIMBP2O15034 1052 aa15.79■□□□□ 0.12
KNL1-209ENST00000532347 ARSIQ5FYB1 569 aa15.79■□□□□ 0.12
KNL1-209ENST00000532347 PRIM1P49642 420 aaKnown RBP15.78■□□□□ 0.12
KNL1-209ENST00000532347 KHSRPQ92945 711 aaKnown RBP eCLIP15.78■□□□□ 0.12
KNL1-209ENST00000532347 ZSWIM6Q9HCJ5 1215 aa15.78■□□□□ 0.12
KNL1-209ENST00000532347 NUTM2FA1L443 756 aa15.76■□□□□ 0.11
KNL1-209ENST00000532347 GPR153Q6NV75 609 aa15.76■□□□□ 0.11
KNL1-209ENST00000532347 ZNF710Q8N1W2 664 aa15.76■□□□□ 0.11
KNL1-209ENST00000532347 GPR37O15354 613 aa15.75■□□□□ 0.11
KNL1-209ENST00000532347 PHF14O94880 888 aa15.75■□□□□ 0.11
KNL1-209ENST00000532347 NUDT7P0C024 238 aa15.75■□□□□ 0.11
KNL1-209ENST00000532347 BARGINQ6ZT62 677 aa15.75■□□□□ 0.11
KNL1-209ENST00000532347 PCDHGA10Q9Y5H3 936 aa15.74■□□□□ 0.11
KNL1-209ENST00000532347 EPAS1Q99814 870 aa15.73■□□□□ 0.11
KNL1-209ENST00000532347 SLC24A3Q9HC58 644 aa15.73■□□□□ 0.11
KNL1-209ENST00000532347 SNPHO15079 494 aa15.71■□□□□ 0.11
KNL1-209ENST00000532347 JPH4Q96JJ6 628 aa15.71■□□□□ 0.11
KNL1-209ENST00000532347 FOSBP53539 338 aa15.68■□□□□ 0.1
KNL1-209ENST00000532347 EN1Q05925 392 aaPredicted RBP15.68■□□□□ 0.1
KNL1-209ENST00000532347 TYW1BQ6NUM6 668 aa15.68■□□□□ 0.1
KNL1-209ENST00000532347 RBM33Q96EV2 1170 aaKnown RBP15.67■□□□□ 0.1
KNL1-209ENST00000532347 MAP3K7O43318 606 aa15.65■□□□□ 0.1
KNL1-209ENST00000532347 FCHSD2O94868 740 aa15.64■□□□□ 0.09
KNL1-209ENST00000532347 ZNF454Q8N9F8 522 aa15.64■□□□□ 0.09
KNL1-209ENST00000532347 KRI1Q8N9T8 703 aaKnown RBP15.64■□□□□ 0.09
KNL1-209ENST00000532347 FBXW7Q969H0 707 aa15.64■□□□□ 0.09
KNL1-209ENST00000532347 PTGDRQ13258 359 aa15.62■□□□□ 0.09
KNL1-209ENST00000532347 CDHR5Q9HBB8 845 aa15.62■□□□□ 0.09
KNL1-209ENST00000532347 LHX6Q9UPM6 363 aa15.62■□□□□ 0.09
KNL1-209ENST00000532347 HOXB1P14653 301 aaPredicted RBP15.61■□□□□ 0.09
KNL1-209ENST00000532347 GNPATO15228 680 aa15.6■□□□□ 0.09
KNL1-209ENST00000532347 HIC1Q14526 733 aa15.6■□□□□ 0.09
KNL1-209ENST00000532347 TSR1Q2NL82 804 aaKnown RBP15.6■□□□□ 0.09
KNL1-209ENST00000532347 ZDHHC16Q969W1 377 aa15.6■□□□□ 0.09
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms