RNA–Protein interactions for RNA: ENST00000532227.1

GTF2H1-212, Transcript of general transcription factor IIH subunit 1, humanhuman

TSL 3

Gene GTF2H1, Length 770 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF2H1-212ENST00000532227 CCDC180Q9P1Z9 1646 aa16.42■□□□□ 0.22
GTF2H1-212ENST00000532227 DOK7Q18PE1 504 aa16.39■□□□□ 0.21
GTF2H1-212ENST00000532227 MARVELD3Q96A59 401 aa16.39■□□□□ 0.21
GTF2H1-212ENST00000532227 RTN4Q9NQC3 1192 aaKnown RBP16.38■□□□□ 0.21
GTF2H1-212ENST00000532227 ZNF710Q8N1W2 664 aa16.37■□□□□ 0.21
GTF2H1-212ENST00000532227 RYDENQ9NUL5 291 aaKnown RBP16.37■□□□□ 0.21
GTF2H1-212ENST00000532227 PCDH10Q9P2E7 1040 aa16.35■□□□□ 0.21
GTF2H1-212ENST00000532227 C2orf72A6NCS6 295 aa16.34■□□□□ 0.21
GTF2H1-212ENST00000532227 KIF3CO14782 793 aa16.34■□□□□ 0.21
GTF2H1-212ENST00000532227 RIMBP2O15034 1052 aa16.32■□□□□ 0.2
GTF2H1-212ENST00000532227 EMP3P54852 163 aa16.31■□□□□ 0.2
GTF2H1-212ENST00000532227 TMC2Q8TDI7 906 aa16.3■□□□□ 0.2
GTF2H1-212ENST00000532227 GTPBP6O43824 516 aaPredicted RBP16.27■□□□□ 0.2
GTF2H1-212ENST00000532227 HOXB1P14653 301 aaPredicted RBP16.27■□□□□ 0.2
GTF2H1-212ENST00000532227 CDAN1Q8IWY9 1227 aa16.27■□□□□ 0.2
GTF2H1-212ENST00000532227 ZSWIM6Q9HCJ5 1215 aa16.24■□□□□ 0.19
GTF2H1-212ENST00000532227 FAM205CA6NFA0 338 aa16.21■□□□□ 0.19
GTF2H1-212ENST00000532227 GPR153Q6NV75 609 aa16.19■□□□□ 0.18
GTF2H1-212ENST00000532227 HS3ST6Q96QI5 342 aa16.17■□□□□ 0.18
GTF2H1-212ENST00000532227 GPHNQ9NQX3 736 aaPredicted RBP16.16■□□□□ 0.18
GTF2H1-212ENST00000532227 PLSCR2Q9NRY7 297 aa16.16■□□□□ 0.18
GTF2H1-212ENST00000532227 POTEB3A0JP26 581 aa16.15■□□□□ 0.18
GTF2H1-212ENST00000532227 ARSIQ5FYB1 569 aa16.15■□□□□ 0.18
GTF2H1-212ENST00000532227 POTEBQ6S5H4 581 aa16.15■□□□□ 0.18
GTF2H1-212ENST00000532227 BBXQ8WY36 941 aaPredicted RBP16.13■□□□□ 0.17
GTF2H1-212ENST00000532227 FOXK1P85037 733 aa16.12■□□□□ 0.17
GTF2H1-212ENST00000532227 ERBB3P21860 1342 aa16.12■□□□□ 0.17
GTF2H1-212ENST00000532227 SLC34A2O95436 690 aa16.1■□□□□ 0.17
GTF2H1-212ENST00000532227 KHSRPQ92945 711 aaKnown RBP eCLIP16.1■□□□□ 0.17
GTF2H1-212ENST00000532227 DSG2Q14126 1118 aa16.09■□□□□ 0.17
GTF2H1-212ENST00000532227 PLPP6Q8IY26 295 aa16.09■□□□□ 0.17
GTF2H1-212ENST00000532227 CRISPLD2Q9H0B8 497 aa16.07■□□□□ 0.16
GTF2H1-212ENST00000532227 PCDHGA4Q9Y5G9 962 aa16.05■□□□□ 0.16
GTF2H1-212ENST00000532227 VARS2Q5ST30 1063 aaKnown RBP16.04■□□□□ 0.16
GTF2H1-212ENST00000532227 NCKAP5LQ9HCH0 1330 aa16.02■□□□□ 0.16
GTF2H1-212ENST00000532227 PDE4AP27815 886 aa16.02■□□□□ 0.16
GTF2H1-212ENST00000532227 NUDT7P0C024 238 aa16.01■□□□□ 0.15
GTF2H1-212ENST00000532227 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.99■□□□□ 0.15
GTF2H1-212ENST00000532227 ZNF316A6NFI3 1004 aaPredicted RBP15.97■□□□□ 0.15
GTF2H1-212ENST00000532227 PPP1R15BQ5SWA1 713 aa15.97■□□□□ 0.15
GTF2H1-212ENST00000532227 PTCD2Q8WV60 388 aaKnown RBP15.97■□□□□ 0.15
GTF2H1-212ENST00000532227 KRTAP3-3Q9BYR6 98 aa15.96■□□□□ 0.15
GTF2H1-212ENST00000532227 KRTAP3-2Q9BYR7 98 aa15.96■□□□□ 0.15
GTF2H1-212ENST00000532227 SPRYD3Q8NCJ5 442 aa15.95■□□□□ 0.14
GTF2H1-212ENST00000532227 LARP6Q9BRS8 491 aaKnown RBP15.95■□□□□ 0.14
GTF2H1-212ENST00000532227 CADPS2Q86UW7 1296 aa15.94■□□□□ 0.14
GTF2H1-212ENST00000532227 ZNF687Q8N1G0 1237 aa15.92■□□□□ 0.14
GTF2H1-212ENST00000532227 LHX6Q9UPM6 363 aa15.91■□□□□ 0.14
GTF2H1-212ENST00000532227 RB1CC1Q8TDY2 1594 aa15.91■□□□□ 0.14
GTF2H1-212ENST00000532227 TBC1D12O60347 775 aa15.9■□□□□ 0.14
GTF2H1-212ENST00000532227 DDX27Q96GQ7 796 aaKnown RBP15.9■□□□□ 0.14
GTF2H1-212ENST00000532227 MFSD10Q14728 455 aa15.87■□□□□ 0.13
GTF2H1-212ENST00000532227 UPF1Q92900 1129 aaKnown RBP eCLIP15.87■□□□□ 0.13
GTF2H1-212ENST00000532227 KDM4FA0A1W2PPD8 638 aa15.86■□□□□ 0.13
GTF2H1-212ENST00000532227 PAXIP1Q6ZW49 1069 aaPredicted RBP15.86■□□□□ 0.13
GTF2H1-212ENST00000532227 SPNS2Q8IVW8 549 aa15.86■□□□□ 0.13
GTF2H1-212ENST00000532227 OXER1Q8TDS5 423 aa15.86■□□□□ 0.13
GTF2H1-212ENST00000532227 CFAP44Q96MT7 982 aa15.86■□□□□ 0.13
GTF2H1-212ENST00000532227 PSDA5PKW4 1024 aaPredicted RBP15.77■□□□□ 0.12
GTF2H1-212ENST00000532227 MMRN1Q13201 1228 aa15.75■□□□□ 0.11
GTF2H1-212ENST00000532227 EMILIN3Q9NT22 766 aa15.72■□□□□ 0.11
GTF2H1-212ENST00000532227 PBX2P40425 430 aa15.7■□□□□ 0.1
GTF2H1-212ENST00000532227 MAP3K9P80192 1104 aa15.7■□□□□ 0.1
GTF2H1-212ENST00000532227 POTEEQ6S8J3 1075 aa15.69■□□□□ 0.1
GTF2H1-212ENST00000532227 AXIN2Q9Y2T1 843 aa15.69■□□□□ 0.1
GTF2H1-212ENST00000532227 NACADO15069 1562 aa15.69■□□□□ 0.1
GTF2H1-212ENST00000532227 EVI5O60447 810 aa15.68■□□□□ 0.1
GTF2H1-212ENST00000532227 PPP4R3BQ5MIZ7 849 aa15.68■□□□□ 0.1
GTF2H1-212ENST00000532227 ANKRD13DQ6ZTN6 518 aa15.67■□□□□ 0.1
GTF2H1-212ENST00000532227 LSM11P83369 360 aaKnown RBP eCLIP15.65■□□□□ 0.1
GTF2H1-212ENST00000532227 CAMK2BQ13554 666 aa15.65■□□□□ 0.1
GTF2H1-212ENST00000532227 ANO8Q9HCE9 1232 aaPredicted RBP15.65■□□□□ 0.1
GTF2H1-212ENST00000532227 ARHGAP33O14559 1287 aa15.63■□□□□ 0.09
GTF2H1-212ENST00000532227 ZNF454Q8N9F8 522 aa15.62■□□□□ 0.09
GTF2H1-212ENST00000532227 FOSBP53539 338 aa15.58■□□□□ 0.08
GTF2H1-212ENST00000532227 PSEN2P49810 448 aa15.57■□□□□ 0.08
GTF2H1-212ENST00000532227 WDR70Q9NW82 654 aa15.56■□□□□ 0.08
GTF2H1-212ENST00000532227 DPYSL4O14531 572 aa15.55■□□□□ 0.08
GTF2H1-212ENST00000532227 JPH4Q96JJ6 628 aa15.55■□□□□ 0.08
GTF2H1-212ENST00000532227 MYT1LQ9UL68 1186 aa15.53■□□□□ 0.08
GTF2H1-212ENST00000532227 PTGER2P43116 358 aa15.52■□□□□ 0.08
GTF2H1-212ENST00000532227 DMRTA1Q5VZB9 504 aa15.52■□□□□ 0.08
GTF2H1-212ENST00000532227 KCNK17Q96T54 332 aa15.52■□□□□ 0.08
GTF2H1-212ENST00000532227 TSHZ2Q9NRE2 1034 aa15.51■□□□□ 0.07
GTF2H1-212ENST00000532227 E2F4Q16254 413 aa15.5■□□□□ 0.07
GTF2H1-212ENST00000532227 KCNH8Q96L42 1107 aa15.5■□□□□ 0.07
GTF2H1-212ENST00000532227 BCL2L12Q9HB09 334 aa15.5■□□□□ 0.07
GTF2H1-212ENST00000532227 ADGRD1Q6QNK2 874 aa15.49■□□□□ 0.07
GTF2H1-212ENST00000532227 ZDHHC16Q969W1 377 aa15.49■□□□□ 0.07
GTF2H1-212ENST00000532227 RNF166Q96A37 237 aaPredicted RBP15.49■□□□□ 0.07
GTF2H1-212ENST00000532227 UNC13AQ9UPW8 1703 aa15.46■□□□□ 0.07
GTF2H1-212ENST00000532227 ADAM33Q9BZ11 813 aa15.46■□□□□ 0.07
GTF2H1-212ENST00000532227 PCDHGA10Q9Y5H3 936 aa15.46■□□□□ 0.07
GTF2H1-212ENST00000532227 BICRAQ9NZM4 1560 aa15.45■□□□□ 0.06
GTF2H1-212ENST00000532227 TK2O00142 265 aa15.45■□□□□ 0.06
GTF2H1-212ENST00000532227 PTPREP23469 700 aa15.44■□□□□ 0.06
GTF2H1-212ENST00000532227 PHF14O94880 888 aa15.43■□□□□ 0.06
GTF2H1-212ENST00000532227 TYW1BQ6NUM6 668 aa15.39■□□□□ 0.05
GTF2H1-212ENST00000532227 HRO43593 1189 aa15.38■□□□□ 0.05
GTF2H1-212ENST00000532227 PDIA6Q15084 440 aa15.38■□□□□ 0.05
Retrieved 100 of 20,778 RNA–protein pairs in 26.8 ms