RNA–Protein interactions for RNA: ENST00000531990.1

CCS-207, Transcript of copper chaperone for superoxide dismutase, humanhuman

TSL 2

Gene CCS, Length 868 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCS-207ENST00000531990 SUPT6HQ7KZ85 1726 aaKnown RBP32.64■■■□□ 2.82
CCS-207ENST00000531990 AKNAQ7Z591 1439 aa32.64■■■□□ 2.82
CCS-207ENST00000531990 CDC42BPBQ9Y5S2 1711 aa32.63■■■□□ 2.81
CCS-207ENST00000531990 CCNB3Q8WWL7 1395 aa32.6■■■□□ 2.81
CCS-207ENST00000531990 GPATCH8Q9UKJ3 1502 aaKnown RBP32.56■■■□□ 2.8
CCS-207ENST00000531990 ADGRL1O94910 1474 aa32.56■■■□□ 2.8
CCS-207ENST00000531990 NCOA2Q15596 1464 aa32.55■■■□□ 2.8
CCS-207ENST00000531990 KANK4Q5T7N3 995 aaPredicted RBP32.55■■■□□ 2.8
CCS-207ENST00000531990 ITSN2Q9NZM3 1697 aa32.55■■■□□ 2.8
CCS-207ENST00000531990 DENND4BO75064 1496 aaPredicted RBP32.54■■■□□ 2.8
CCS-207ENST00000531990 RAPGEF3O95398 923 aa32.5■■■□□ 2.79
CCS-207ENST00000531990 SCAPERQ9BY12 1400 aa32.5■■■□□ 2.79
CCS-207ENST00000531990 CFDP1Q9UEE9 299 aaPredicted RBP32.49■■■□□ 2.79
CCS-207ENST00000531990 RICTORQ6R327 1708 aa32.47■■■□□ 2.79
CCS-207ENST00000531990 ZNF777Q9ULD5 760 aaPredicted RBP32.46■■■□□ 2.79
CCS-207ENST00000531990 FRMPD1Q5SYB0 1578 aa32.45■■■□□ 2.79
CCS-207ENST00000531990 ABCC1P33527 1531 aa32.42■■■□□ 2.78
CCS-207ENST00000531990 POGZQ7Z3K3 1410 aa32.42■■■□□ 2.78
CCS-207ENST00000531990 SAMD9LQ8IVG5 1584 aa32.41■■■□□ 2.78
CCS-207ENST00000531990 PLEKHH2Q8IVE3 1493 aa32.39■■■□□ 2.78
CCS-207ENST00000531990 ZNF518AQ6AHZ1 1483 aa32.36■■■□□ 2.77
CCS-207ENST00000531990 ZMYM4Q5VZL5 1548 aa32.36■■■□□ 2.77
CCS-207ENST00000531990 SYCP2Q9BX26 1530 aa32.32■■■□□ 2.76
CCS-207ENST00000531990 ARHGEF12Q9NZN5 1544 aa32.32■■■□□ 2.76
CCS-207ENST00000531990 MYOM3Q5VTT5 1437 aa32.32■■■□□ 2.76
CCS-207ENST00000531990 KIAA1107Q9UPP5 1409 aa32.32■■■□□ 2.76
CCS-207ENST00000531990 MAGI2Q86UL8 1455 aa32.3■■■□□ 2.76
CCS-207ENST00000531990 AFAP1Q8N556 730 aa32.29■■■□□ 2.76
CCS-207ENST00000531990 KDM5CP41229 1560 aa32.28■■■□□ 2.76
CCS-207ENST00000531990 TRAPPC8Q9Y2L5 1435 aa32.28■■■□□ 2.76
CCS-207ENST00000531990 HNRNPMP52272 730 aaKnown RBP eCLIP32.27■■■□□ 2.76
CCS-207ENST00000531990 ZNF644Q9H582 1327 aaPredicted RBP32.26■■■□□ 2.76
CCS-207ENST00000531990 ZFYVE16Q7Z3T8 1539 aa32.26■■■□□ 2.76
CCS-207ENST00000531990 ARHGEF40Q8TER5 1519 aa32.26■■■□□ 2.76
CCS-207ENST00000531990 MIA2Q96PC5 1412 aa32.26■■■□□ 2.75
CCS-207ENST00000531990 CAMSAP2Q08AD1 1489 aa32.25■■■□□ 2.75
CCS-207ENST00000531990 MYT1LQ9UL68 1186 aa32.24■■■□□ 2.75
CCS-207ENST00000531990 HECW2Q9P2P5 1572 aa32.24■■■□□ 2.75
CCS-207ENST00000531990 YEATS2Q9ULM3 1422 aa32.18■■■□□ 2.74
CCS-207ENST00000531990 MLH3Q9UHC1 1453 aa32.18■■■□□ 2.74
CCS-207ENST00000531990 MBD5Q9P267 1494 aa32.16■■■□□ 2.74
CCS-207ENST00000531990 RSPH4AQ5TD94 716 aa32.15■■■□□ 2.74
CCS-207ENST00000531990 SPAG9O60271 1321 aaKnown RBP32.15■■■□□ 2.74
CCS-207ENST00000531990 FGD6Q6ZV73 1430 aa32.14■■■□□ 2.74
CCS-207ENST00000531990 PTPN23Q9H3S7 1636 aa32.14■■■□□ 2.74
CCS-207ENST00000531990 PPARGC1BQ86YN6 1023 aaKnown RBP32.13■■■□□ 2.73
CCS-207ENST00000531990 ARHGEF5Q12774 1597 aa32.12■■■□□ 2.73
CCS-207ENST00000531990 CCDC141Q6ZP82 1450 aa32.12■■■□□ 2.73
CCS-207ENST00000531990 KIDINS220Q9ULH0 1771 aa32.12■■■□□ 2.73
CCS-207ENST00000531990 ATP10AO60312 1499 aa32.11■■■□□ 2.73
CCS-207ENST00000531990 ATP7AQ04656 1500 aa32.09■■■□□ 2.73
CCS-207ENST00000531990 ARID4BQ4LE39 1312 aaPredicted RBP32.08■■■□□ 2.73
CCS-207ENST00000531990 DIP2CQ9Y2E4 1556 aa32.08■■■□□ 2.73
CCS-207ENST00000531990 C9orf84Q5VXU9 1444 aa32.08■■■□□ 2.73
CCS-207ENST00000531990 ABCA6Q8N139 1617 aa32.08■■■□□ 2.73
CCS-207ENST00000531990 INO80Q9ULG1 1556 aaPredicted RBP32.07■■■□□ 2.72
CCS-207ENST00000531990 AEBP2Q6ZN18 517 aaPredicted RBP32.04■■■□□ 2.72
CCS-207ENST00000531990 TCOF1Q13428 1488 aaKnown RBP32.03■■■□□ 2.72
CCS-207ENST00000531990 TSPY4P0CV99 314 aa32.03■■■□□ 2.72
CCS-207ENST00000531990 TSPY10P0CW01 314 aa32.03■■■□□ 2.72
CCS-207ENST00000531990 RTEL1-TNFRSF6BF6WH68 1400 aa32.01■■■□□ 2.72
CCS-207ENST00000531990 REREQ9P2R6 1566 aa32■■■□□ 2.71
CCS-207ENST00000531990 KDM4FA0A1W2PPD8 638 aa31.96■■■□□ 2.71
CCS-207ENST00000531990 FAM50AQ14320 339 aaKnown RBP31.96■■■□□ 2.71
CCS-207ENST00000531990 SIGLEC1Q9BZZ2 1709 aa31.96■■■□□ 2.71
CCS-207ENST00000531990 ADGBQ8N7X0 1667 aa31.95■■■□□ 2.71
CCS-207ENST00000531990 BCORL1Q5H9F3 1711 aa31.95■■■□□ 2.71
CCS-207ENST00000531990 DNMT1P26358 1616 aaKnown RBP31.94■■■□□ 2.7
CCS-207ENST00000531990 MAST1Q9Y2H9 1570 aa31.94■■■□□ 2.7
CCS-207ENST00000531990 CROCC2H7BZ55 1655 aa31.92■■■□□ 2.7
CCS-207ENST00000531990 ABCC5O15440 1437 aa31.9■■■□□ 2.7
CCS-207ENST00000531990 DAPK1P53355 1430 aa31.9■■■□□ 2.7
CCS-207ENST00000531990 A2MP01023 1474 aa31.9■■■□□ 2.7
CCS-207ENST00000531990 SHANK2Q9UPX8 1470 aa31.89■■■□□ 2.7
CCS-207ENST00000531990 AGLP35573 1532 aa31.89■■■□□ 2.7
CCS-207ENST00000531990 ADAMTSL3P82987 1691 aa31.88■■■□□ 2.69
CCS-207ENST00000531990 MLECQ14165 292 aa31.87■■■□□ 2.69
CCS-207ENST00000531990 PLXNC1O60486 1568 aa31.85■■■□□ 2.69
CCS-207ENST00000531990 MADDQ8WXG6 1647 aa31.81■■■□□ 2.68
CCS-207ENST00000531990 DHX29Q7Z478 1369 aaKnown RBP31.8■■■□□ 2.68
CCS-207ENST00000531990 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP31.8■■■□□ 2.68
CCS-207ENST00000531990 FER1L4A9Z1Z3 1794 aa31.78■■■□□ 2.68
CCS-207ENST00000531990 RRBP1Q9P2E9 1410 aaKnown RBP31.77■■■□□ 2.68
CCS-207ENST00000531990 CHIC2Q9UKJ5 165 aa31.75■■■□□ 2.67
CCS-207ENST00000531990 RIMS1Q86UR5 1692 aaKnown RBP31.74■■■□□ 2.67
CCS-207ENST00000531990 ANKRD30AQ9BXX3 1397 aa31.74■■■□□ 2.67
CCS-207ENST00000531990 DUOX2Q9NRD8 1548 aa31.72■■■□□ 2.67
CCS-207ENST00000531990 KIF15Q9NS87 1388 aa31.71■■■□□ 2.67
CCS-207ENST00000531990 ESF1Q9H501 851 aaKnown RBP31.71■■■□□ 2.67
CCS-207ENST00000531990 RRP7BPQ9NSQ0 103 aa31.69■■■□□ 2.66
CCS-207ENST00000531990 ADGRL2O95490 1459 aa31.68■■■□□ 2.66
CCS-207ENST00000531990 PTPRMP28827 1452 aa31.68■■■□□ 2.66
CCS-207ENST00000531990 KIF3BO15066 747 aa31.68■■■□□ 2.66
CCS-207ENST00000531990 ITGAEP38570 1179 aa31.67■■■□□ 2.66
CCS-207ENST00000531990 GGT6Q6P531 493 aa31.66■■■□□ 2.66
CCS-207ENST00000531990 EIF2AK4Q9P2K8 1649 aaKnown RBP31.66■■■□□ 2.66
CCS-207ENST00000531990 NCOA1Q15788 1441 aa31.66■■■□□ 2.66
CCS-207ENST00000531990 PTPRKQ15262 1439 aa31.62■■■□□ 2.65
CCS-207ENST00000531990 ERBINQ96RT1 1412 aa31.62■■■□□ 2.65
CCS-207ENST00000531990 PPP6R1Q9UPN7 881 aa31.61■■■□□ 2.65
Retrieved 100 of 20,778 RNA–protein pairs in 7 ms