RNA–Protein interactions for RNA: ENST00000531897.5

PUF60-216, Transcript of poly(U) binding splicing factor 60, humanhuman

TSL 5

Gene PUF60, Length 785 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PUF60-216ENST00000531897 AKNAQ7Z591 1439 aa35.14■■■■□ 3.22
PUF60-216ENST00000531897 CDC42BPAQ5VT25 1732 aa35.12■■■■□ 3.21
PUF60-216ENST00000531897 NCOA2Q15596 1464 aa35.09■■■■□ 3.21
PUF60-216ENST00000531897 CDC42BPBQ9Y5S2 1711 aa35.09■■■■□ 3.21
PUF60-216ENST00000531897 GPATCH8Q9UKJ3 1502 aaKnown RBP35.09■■■■□ 3.21
PUF60-216ENST00000531897 COL17A1Q9UMD9 1497 aaPredicted RBP35.09■■■■□ 3.21
PUF60-216ENST00000531897 ITSN2Q9NZM3 1697 aa35.08■■■■□ 3.21
PUF60-216ENST00000531897 ADGRL1O94910 1474 aa35.06■■■■□ 3.2
PUF60-216ENST00000531897 KANK4Q5T7N3 995 aaPredicted RBP35.06■■■■□ 3.2
PUF60-216ENST00000531897 DENND4BO75064 1496 aaPredicted RBP35.03■■■■□ 3.2
PUF60-216ENST00000531897 CFDP1Q9UEE9 299 aaPredicted RBP35■■■■□ 3.19
PUF60-216ENST00000531897 SCAPERQ9BY12 1400 aa34.98■■■■□ 3.19
PUF60-216ENST00000531897 PLEKHH2Q8IVE3 1493 aa34.95■■■■□ 3.19
PUF60-216ENST00000531897 ABCC1P33527 1531 aa34.94■■■■□ 3.18
PUF60-216ENST00000531897 POGZQ7Z3K3 1410 aa34.92■■■■□ 3.18
PUF60-216ENST00000531897 RICTORQ6R327 1708 aa34.92■■■■□ 3.18
PUF60-216ENST00000531897 RAPGEF3O95398 923 aa34.91■■■■□ 3.18
PUF60-216ENST00000531897 ZNF777Q9ULD5 760 aaPredicted RBP34.91■■■■□ 3.18
PUF60-216ENST00000531897 FRMPD1Q5SYB0 1578 aa34.91■■■■□ 3.18
PUF60-216ENST00000531897 SAMD9LQ8IVG5 1584 aa34.9■■■■□ 3.18
PUF60-216ENST00000531897 ZNF518AQ6AHZ1 1483 aa34.89■■■■□ 3.18
PUF60-216ENST00000531897 MYOM3Q5VTT5 1437 aa34.87■■■■□ 3.17
PUF60-216ENST00000531897 KIAA1107Q9UPP5 1409 aa34.86■■■■□ 3.17
PUF60-216ENST00000531897 ZMYM4Q5VZL5 1548 aa34.86■■■■□ 3.17
PUF60-216ENST00000531897 MIA2Q96PC5 1412 aa34.83■■■■□ 3.17
PUF60-216ENST00000531897 MAGI2Q86UL8 1455 aa34.82■■■■□ 3.16
PUF60-216ENST00000531897 SYCP2Q9BX26 1530 aa34.81■■■■□ 3.16
PUF60-216ENST00000531897 KDM5CP41229 1560 aa34.79■■■■□ 3.16
PUF60-216ENST00000531897 ARHGEF12Q9NZN5 1544 aa34.78■■■■□ 3.16
PUF60-216ENST00000531897 CAMSAP2Q08AD1 1489 aa34.78■■■■□ 3.16
PUF60-216ENST00000531897 TRAPPC8Q9Y2L5 1435 aa34.74■■■■□ 3.15
PUF60-216ENST00000531897 ZFYVE16Q7Z3T8 1539 aa34.73■■■■□ 3.15
PUF60-216ENST00000531897 ARHGEF40Q8TER5 1519 aa34.73■■■■□ 3.15
PUF60-216ENST00000531897 AFAP1Q8N556 730 aa34.71■■■■□ 3.15
PUF60-216ENST00000531897 ZNF644Q9H582 1327 aaPredicted RBP34.71■■■■□ 3.15
PUF60-216ENST00000531897 HECW2Q9P2P5 1572 aa34.7■■■■□ 3.15
PUF60-216ENST00000531897 HNRNPMP52272 730 aaKnown RBP eCLIP34.7■■■■□ 3.157e-7■■■□□ 18.4
PUF60-216ENST00000531897 RSPH4AQ5TD94 716 aa34.69■■■■□ 3.14
PUF60-216ENST00000531897 MLH3Q9UHC1 1453 aa34.69■■■■□ 3.14
PUF60-216ENST00000531897 FGD6Q6ZV73 1430 aa34.68■■■■□ 3.14
PUF60-216ENST00000531897 MBD5Q9P267 1494 aa34.66■■■■□ 3.14
PUF60-216ENST00000531897 MYT1LQ9UL68 1186 aa34.65■■■■□ 3.14
PUF60-216ENST00000531897 CCDC141Q6ZP82 1450 aa34.65■■■■□ 3.14
PUF60-216ENST00000531897 PTPN23Q9H3S7 1636 aa34.64■■■■□ 3.14
PUF60-216ENST00000531897 ARHGEF5Q12774 1597 aa34.64■■■■□ 3.14
PUF60-216ENST00000531897 SPAG9O60271 1321 aaKnown RBP34.62■■■■□ 3.13
PUF60-216ENST00000531897 YEATS2Q9ULM3 1422 aa34.61■■■■□ 3.13
PUF60-216ENST00000531897 TCOF1Q13428 1488 aaKnown RBP34.59■■■■□ 3.13
PUF60-216ENST00000531897 ATP10AO60312 1499 aa34.57■■■■□ 3.12
PUF60-216ENST00000531897 ATP7AQ04656 1500 aa34.56■■■■□ 3.12
PUF60-216ENST00000531897 INO80Q9ULG1 1556 aaPredicted RBP34.56■■■■□ 3.12
PUF60-216ENST00000531897 PPARGC1BQ86YN6 1023 aaKnown RBP34.55■■■■□ 3.12
PUF60-216ENST00000531897 C9orf84Q5VXU9 1444 aa34.55■■■■□ 3.12
PUF60-216ENST00000531897 KIDINS220Q9ULH0 1771 aa34.54■■■■□ 3.12
PUF60-216ENST00000531897 RTEL1-TNFRSF6BF6WH68 1400 aa34.54■■■■□ 3.12
PUF60-216ENST00000531897 DIP2CQ9Y2E4 1556 aa34.53■■■■□ 3.12
PUF60-216ENST00000531897 TSPY4P0CV99 314 aa34.52■■■■□ 3.12
PUF60-216ENST00000531897 TSPY10P0CW01 314 aa34.52■■■■□ 3.12
PUF60-216ENST00000531897 ABCA6Q8N139 1617 aa34.52■■■■□ 3.12
PUF60-216ENST00000531897 REREQ9P2R6 1566 aa34.49■■■■□ 3.11
PUF60-216ENST00000531897 ARID4BQ4LE39 1312 aaPredicted RBP34.46■■■■□ 3.11
PUF60-216ENST00000531897 MAST1Q9Y2H9 1570 aa34.45■■■■□ 3.11
PUF60-216ENST00000531897 DNMT1P26358 1616 aaKnown RBP34.44■■■■□ 3.1
PUF60-216ENST00000531897 SHANK2Q9UPX8 1470 aa34.44■■■■□ 3.1
PUF60-216ENST00000531897 FAM50AQ14320 339 aaKnown RBP34.43■■■■□ 3.1
PUF60-216ENST00000531897 CROCC2H7BZ55 1655 aa34.41■■■■□ 3.1
PUF60-216ENST00000531897 ADGBQ8N7X0 1667 aa34.41■■■■□ 3.1
PUF60-216ENST00000531897 DAPK1P53355 1430 aa34.4■■■■□ 3.1
PUF60-216ENST00000531897 ABCC5O15440 1437 aa34.38■■■■□ 3.09
PUF60-216ENST00000531897 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP34.38■■■■□ 3.091e-6■■■□□ 17.2
PUF60-216ENST00000531897 AGLP35573 1532 aa34.36■■■■□ 3.09
PUF60-216ENST00000531897 A2MP01023 1474 aa34.36■■■■□ 3.09
PUF60-216ENST00000531897 BCORL1Q5H9F3 1711 aa34.33■■■■□ 3.09
PUF60-216ENST00000531897 PLXNC1O60486 1568 aa34.33■■■■□ 3.09
PUF60-216ENST00000531897 RRBP1Q9P2E9 1410 aaKnown RBP34.33■■■■□ 3.09
PUF60-216ENST00000531897 SIGLEC1Q9BZZ2 1709 aa34.31■■■■□ 3.08
PUF60-216ENST00000531897 DHX29Q7Z478 1369 aaKnown RBP34.27■■■■□ 3.08
PUF60-216ENST00000531897 KDM4FA0A1W2PPD8 638 aa34.26■■■■□ 3.08
PUF60-216ENST00000531897 ADAMTSL3P82987 1691 aa34.25■■■■□ 3.07
PUF60-216ENST00000531897 ANKRD30AQ9BXX3 1397 aa34.24■■■■□ 3.07
PUF60-216ENST00000531897 ADGRL2O95490 1459 aa34.2■■■■□ 3.07
PUF60-216ENST00000531897 DUOX2Q9NRD8 1548 aa34.2■■■■□ 3.07
PUF60-216ENST00000531897 MLECQ14165 292 aa34.19■■■■□ 3.06
PUF60-216ENST00000531897 KIF15Q9NS87 1388 aa34.19■■■■□ 3.06
PUF60-216ENST00000531897 MADDQ8WXG6 1647 aa34.16■■■■□ 3.06
PUF60-216ENST00000531897 CHIC2Q9UKJ5 165 aa34.16■■■■□ 3.06
PUF60-216ENST00000531897 NCOA1Q15788 1441 aa34.14■■■■□ 3.06
PUF60-216ENST00000531897 EIF2AK4Q9P2K8 1649 aaKnown RBP34.14■■■■□ 3.06
PUF60-216ENST00000531897 FER1L4A9Z1Z3 1794 aa34.13■■■■□ 3.05
PUF60-216ENST00000531897 ERBINQ96RT1 1412 aa34.13■■■■□ 3.05
PUF60-216ENST00000531897 AEBP2Q6ZN18 517 aaPredicted RBP34.12■■■■□ 3.05
PUF60-216ENST00000531897 RRP7BPQ9NSQ0 103 aa34.12■■■■□ 3.05
PUF60-216ENST00000531897 ROCK1Q13464 1354 aa34.11■■■■□ 3.05
PUF60-216ENST00000531897 ESF1Q9H501 851 aaKnown RBP34.11■■■■□ 3.05
PUF60-216ENST00000531897 PTPRKQ15262 1439 aa34.08■■■■□ 3.05
PUF60-216ENST00000531897 KIF3BO15066 747 aa34.08■■■■□ 3.05
PUF60-216ENST00000531897 ITGAEP38570 1179 aa34.08■■■■□ 3.05
PUF60-216ENST00000531897 PPP6R1Q9UPN7 881 aa34.08■■■■□ 3.05
PUF60-216ENST00000531897 RIMS1Q86UR5 1692 aaKnown RBP34.08■■■■□ 3.05
PUF60-216ENST00000531897 CNTLNQ9NXG0 1405 aa34.06■■■■□ 3.04
Retrieved 100 of 20,778 RNA–protein pairs in 99 ms