RNA–Protein interactions for RNA: ENST00000531555.5

TRIM29-217, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 535 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-217ENST00000531555 GPATCH8Q9UKJ3 1502 aaKnown RBP12.8□□□□□ -0.36
TRIM29-217ENST00000531555 CFAP74Q9C0B2 1584 aa12.79□□□□□ -0.36
TRIM29-217ENST00000531555 PHLDB1Q86UU1 1377 aa12.79□□□□□ -0.36
TRIM29-217ENST00000531555 PLCH2O75038 1416 aa12.79□□□□□ -0.36
TRIM29-217ENST00000531555 ARAP3Q8WWN8 1544 aa12.78□□□□□ -0.36
TRIM29-217ENST00000531555 SAMD9LQ8IVG5 1584 aa12.77□□□□□ -0.36
TRIM29-217ENST00000531555 MYOM3Q5VTT5 1437 aa12.77□□□□□ -0.37
TRIM29-217ENST00000531555 FANCAO15360 1455 aa12.77□□□□□ -0.37
TRIM29-217ENST00000531555 TEX14Q8IWB6 1497 aa12.76□□□□□ -0.37
TRIM29-217ENST00000531555 PTPN23Q9H3S7 1636 aa12.76□□□□□ -0.37
TRIM29-217ENST00000531555 ZNF777Q9ULD5 760 aaPredicted RBP12.74□□□□□ -0.37
TRIM29-217ENST00000531555 ABCC1P33527 1531 aa12.73□□□□□ -0.37
TRIM29-217ENST00000531555 CAMSAP2Q08AD1 1489 aa12.73□□□□□ -0.37
TRIM29-217ENST00000531555 FGD6Q6ZV73 1430 aa12.73□□□□□ -0.37
TRIM29-217ENST00000531555 CFDP1Q9UEE9 299 aaPredicted RBP12.73□□□□□ -0.37
TRIM29-217ENST00000531555 NEO1Q92859 1461 aa12.72□□□□□ -0.37
TRIM29-217ENST00000531555 AKNAQ7Z591 1439 aa12.72□□□□□ -0.37
TRIM29-217ENST00000531555 SYCP2Q9BX26 1530 aa12.72□□□□□ -0.37
TRIM29-217ENST00000531555 ZNF644Q9H582 1327 aaPredicted RBP12.71□□□□□ -0.37
TRIM29-217ENST00000531555 KDM6BO15054 1643 aa12.71□□□□□ -0.37
TRIM29-217ENST00000531555 EFCAB2Q5VUJ9 269 aa12.71□□□□□ -0.37
TRIM29-217ENST00000531555 ADGRL1O94910 1474 aa12.71□□□□□ -0.38
TRIM29-217ENST00000531555 RICTORQ6R327 1708 aa12.71□□□□□ -0.38
TRIM29-217ENST00000531555 MIA2Q96PC5 1412 aa12.71□□□□□ -0.38
TRIM29-217ENST00000531555 ARHGEF12Q9NZN5 1544 aa12.7□□□□□ -0.38
TRIM29-217ENST00000531555 FRMPD1Q5SYB0 1578 aa12.69□□□□□ -0.38
TRIM29-217ENST00000531555 CROCC2H7BZ55 1655 aa12.68□□□□□ -0.38
TRIM29-217ENST00000531555 TCOF1Q13428 1488 aaKnown RBP12.68□□□□□ -0.38
TRIM29-217ENST00000531555 COL17A1Q9UMD9 1497 aaPredicted RBP12.67□□□□□ -0.38
TRIM29-217ENST00000531555 SCAPERQ9BY12 1400 aa12.67□□□□□ -0.38
TRIM29-217ENST00000531555 PLEKHH2Q8IVE3 1493 aa12.66□□□□□ -0.38
TRIM29-217ENST00000531555 HNRNPMP52272 730 aaKnown RBP eCLIP12.66□□□□□ -0.38
TRIM29-217ENST00000531555 FAM50AQ14320 339 aaKnown RBP12.66□□□□□ -0.38
TRIM29-217ENST00000531555 DNMT1P26358 1616 aaKnown RBP12.66□□□□□ -0.38
TRIM29-217ENST00000531555 DENND4BO75064 1496 aaPredicted RBP12.65□□□□□ -0.38
TRIM29-217ENST00000531555 ARHGEF5Q12774 1597 aa12.65□□□□□ -0.38
TRIM29-217ENST00000531555 RRBP1Q9P2E9 1410 aaKnown RBP12.65□□□□□ -0.38
TRIM29-217ENST00000531555 TRAPPC8Q9Y2L5 1435 aa12.65□□□□□ -0.38
TRIM29-217ENST00000531555 POGZQ7Z3K3 1410 aa12.64□□□□□ -0.39
TRIM29-217ENST00000531555 MBD5Q9P267 1494 aa12.64□□□□□ -0.39
TRIM29-217ENST00000531555 KIAA1107Q9UPP5 1409 aa12.63□□□□□ -0.39
TRIM29-217ENST00000531555 RAPGEF3O95398 923 aa12.63□□□□□ -0.39
TRIM29-217ENST00000531555 CCDC141Q6ZP82 1450 aa12.63□□□□□ -0.39
TRIM29-217ENST00000531555 KDM5CP41229 1560 aa12.62□□□□□ -0.39
TRIM29-217ENST00000531555 ZNF518AQ6AHZ1 1483 aa12.62□□□□□ -0.39
TRIM29-217ENST00000531555 FOXD1Q16676 465 aa12.62□□□□□ -0.39
TRIM29-217ENST00000531555 KIDINS220Q9ULH0 1771 aa12.61□□□□□ -0.39
TRIM29-217ENST00000531555 ADGBQ8N7X0 1667 aa12.61□□□□□ -0.39
TRIM29-217ENST00000531555 HECW2Q9P2P5 1572 aa12.61□□□□□ -0.39
TRIM29-217ENST00000531555 AFAP1Q8N556 730 aa12.61□□□□□ -0.39
TRIM29-217ENST00000531555 DAPK1P53355 1430 aa12.61□□□□□ -0.39
TRIM29-217ENST00000531555 INO80Q9ULG1 1556 aaPredicted RBP12.6□□□□□ -0.39
TRIM29-217ENST00000531555 ZMYM4Q5VZL5 1548 aa12.6□□□□□ -0.39
TRIM29-217ENST00000531555 ABCC5O15440 1437 aa12.6□□□□□ -0.39
TRIM29-217ENST00000531555 ABCA6Q8N139 1617 aa12.59□□□□□ -0.39
TRIM29-217ENST00000531555 ZFYVE16Q7Z3T8 1539 aa12.59□□□□□ -0.39
TRIM29-217ENST00000531555 ITGAEP38570 1179 aa12.59□□□□□ -0.39
TRIM29-217ENST00000531555 MAST1Q9Y2H9 1570 aa12.59□□□□□ -0.39
TRIM29-217ENST00000531555 ATP7AQ04656 1500 aa12.58□□□□□ -0.4
TRIM29-217ENST00000531555 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP12.57□□□□□ -0.4
TRIM29-217ENST00000531555 PTPRKQ15262 1439 aa12.57□□□□□ -0.4
TRIM29-217ENST00000531555 C9orf84Q5VXU9 1444 aa12.56□□□□□ -0.4
TRIM29-217ENST00000531555 MYT1LQ9UL68 1186 aa12.56□□□□□ -0.4
TRIM29-217ENST00000531555 SHANK2Q9UPX8 1470 aa12.56□□□□□ -0.4
TRIM29-217ENST00000531555 ARHGEF40Q8TER5 1519 aa12.56□□□□□ -0.4
TRIM29-217ENST00000531555 SPAG9O60271 1321 aaKnown RBP12.56□□□□□ -0.4
TRIM29-217ENST00000531555 DIP2CQ9Y2E4 1556 aa12.56□□□□□ -0.4
TRIM29-217ENST00000531555 YEATS2Q9ULM3 1422 aa12.55□□□□□ -0.4
TRIM29-217ENST00000531555 MLH3Q9UHC1 1453 aa12.55□□□□□ -0.4
TRIM29-217ENST00000531555 CHIC2Q9UKJ5 165 aa12.55□□□□□ -0.4
TRIM29-217ENST00000531555 PLXNC1O60486 1568 aa12.55□□□□□ -0.4
TRIM29-217ENST00000531555 SIGLEC1Q9BZZ2 1709 aa12.54□□□□□ -0.4
TRIM29-217ENST00000531555 TSPY4P0CV99 314 aa12.54□□□□□ -0.4
TRIM29-217ENST00000531555 TSPY10P0CW01 314 aa12.54□□□□□ -0.4
TRIM29-217ENST00000531555 RSPH4AQ5TD94 716 aa12.53□□□□□ -0.4
TRIM29-217ENST00000531555 MAGI2Q86UL8 1455 aa12.52□□□□□ -0.41
TRIM29-217ENST00000531555 RTEL1-TNFRSF6BF6WH68 1400 aa12.51□□□□□ -0.41
TRIM29-217ENST00000531555 ADGRL2O95490 1459 aa12.51□□□□□ -0.41
TRIM29-217ENST00000531555 GCC2Q8IWJ2 1684 aa12.51□□□□□ -0.41
TRIM29-217ENST00000531555 ATP10AO60312 1499 aa12.48□□□□□ -0.41
TRIM29-217ENST00000531555 NCOA1Q15788 1441 aa12.48□□□□□ -0.41
TRIM29-217ENST00000531555 ANKRD30AQ9BXX3 1397 aa12.48□□□□□ -0.41
TRIM29-217ENST00000531555 TRIM26Q12899 539 aaPredicted RBP12.48□□□□□ -0.41
TRIM29-217ENST00000531555 RRP7BPQ9NSQ0 103 aa12.48□□□□□ -0.41
TRIM29-217ENST00000531555 A2MP01023 1474 aa12.47□□□□□ -0.41
TRIM29-217ENST00000531555 KIF15Q9NS87 1388 aa12.47□□□□□ -0.41
TRIM29-217ENST00000531555 REREQ9P2R6 1566 aa12.47□□□□□ -0.41
TRIM29-217ENST00000531555 DUOX2Q9NRD8 1548 aa12.47□□□□□ -0.41
TRIM29-217ENST00000531555 ROCK1Q13464 1354 aa12.46□□□□□ -0.41
TRIM29-217ENST00000531555 EIF2AK4Q9P2K8 1649 aaKnown RBP12.44□□□□□ -0.42
TRIM29-217ENST00000531555 BCORL1Q5H9F3 1711 aa12.44□□□□□ -0.42
TRIM29-217ENST00000531555 NAIPQ13075 1403 aa12.43□□□□□ -0.42
TRIM29-217ENST00000531555 DHX29Q7Z478 1369 aaKnown RBP12.43□□□□□ -0.42
TRIM29-217ENST00000531555 HFM1A2PYH4 1435 aa12.42□□□□□ -0.42
TRIM29-217ENST00000531555 AGLP35573 1532 aa12.42□□□□□ -0.42
TRIM29-217ENST00000531555 ERBINQ96RT1 1412 aa12.41□□□□□ -0.42
TRIM29-217ENST00000531555 ANKRD50Q9ULJ7 1429 aa12.41□□□□□ -0.42
TRIM29-217ENST00000531555 DEPDC5O75140 1603 aa12.4□□□□□ -0.42
TRIM29-217ENST00000531555 RNF17Q9BXT8 1623 aaKnown RBP12.4□□□□□ -0.42
TRIM29-217ENST00000531555 ARID4BQ4LE39 1312 aaPredicted RBP12.4□□□□□ -0.42
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms