RNA–Protein interactions for RNA: ENST00000531523.1

SNHG9-201, Transcript of small nucleolar RNA host gene 9, humanhuman

TSL 1 (best) BASIC

Gene SNHG9, Length 275 nt, Biotype lincRNA, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG9-201ENST00000531523 CDC42BPBQ9Y5S2 1711 aa24.51■■□□□ 1.51
SNHG9-201ENST00000531523 YEATS2Q9ULM3 1422 aa24.51■■□□□ 1.51
SNHG9-201ENST00000531523 PTPRMP28827 1452 aa24.51■■□□□ 1.51
SNHG9-201ENST00000531523 CCDC18Q5T9S5 1454 aa24.49■■□□□ 1.51
SNHG9-201ENST00000531523 MAGI2Q86UL8 1455 aa24.48■■□□□ 1.51
SNHG9-201ENST00000531523 SCAPERQ9BY12 1400 aa24.48■■□□□ 1.51
SNHG9-201ENST00000531523 PREX2Q70Z35 1606 aa24.47■■□□□ 1.51
SNHG9-201ENST00000531523 FYCO1Q9BQS8 1478 aa24.47■■□□□ 1.51
SNHG9-201ENST00000531523 CLIP1P30622 1438 aa24.46■■□□□ 1.51
SNHG9-201ENST00000531523 CDK11AQ9UQ88 783 aaPredicted RBP24.45■■□□□ 1.5
SNHG9-201ENST00000531523 RIMS1Q86UR5 1692 aaKnown RBP24.45■■□□□ 1.5
SNHG9-201ENST00000531523 KDM5CP41229 1560 aa24.44■■□□□ 1.5
SNHG9-201ENST00000531523 ARHGAP5Q13017 1502 aa24.43■■□□□ 1.5
SNHG9-201ENST00000531523 CDC42BPAQ5VT25 1732 aa24.43■■□□□ 1.5
SNHG9-201ENST00000531523 EFCAB2Q5VUJ9 269 aa24.39■■□□□ 1.49
SNHG9-201ENST00000531523 ABCC1P33527 1531 aa24.38■■□□□ 1.49
SNHG9-201ENST00000531523 ZNF518AQ6AHZ1 1483 aa24.38■■□□□ 1.49
SNHG9-201ENST00000531523 ITSN2Q9NZM3 1697 aa24.37■■□□□ 1.49
SNHG9-201ENST00000531523 ARID4BQ4LE39 1312 aaPredicted RBP24.36■■□□□ 1.49
SNHG9-201ENST00000531523 FER1L4A9Z1Z3 1794 aa24.36■■□□□ 1.49
SNHG9-201ENST00000531523 ARHGEF12Q9NZN5 1544 aa24.35■■□□□ 1.49
SNHG9-201ENST00000531523 DIP2CQ9Y2E4 1556 aa24.33■■□□□ 1.49
SNHG9-201ENST00000531523 ATP10AO60312 1499 aa24.33■■□□□ 1.49
SNHG9-201ENST00000531523 C9orf84Q5VXU9 1444 aa24.33■■□□□ 1.49
SNHG9-201ENST00000531523 ABCA6Q8N139 1617 aa24.32■■□□□ 1.48
SNHG9-201ENST00000531523 LMTK3Q96Q04 1460 aa24.31■■□□□ 1.48
SNHG9-201ENST00000531523 REREQ9P2R6 1566 aa24.3■■□□□ 1.48
SNHG9-201ENST00000531523 SAMD9LQ8IVG5 1584 aa24.29■■□□□ 1.48
SNHG9-201ENST00000531523 TRAPPC8Q9Y2L5 1435 aa24.28■■□□□ 1.48
SNHG9-201ENST00000531523 AFAP1Q8N556 730 aa24.27■■□□□ 1.48
SNHG9-201ENST00000531523 MLH3Q9UHC1 1453 aa24.26■■□□□ 1.47
SNHG9-201ENST00000531523 KIDINS220Q9ULH0 1771 aa24.26■■□□□ 1.47
SNHG9-201ENST00000531523 GPATCH8Q9UKJ3 1502 aaKnown RBP24.25■■□□□ 1.47
SNHG9-201ENST00000531523 CEP162Q5TB80 1403 aa24.23■■□□□ 1.47
SNHG9-201ENST00000531523 SYCP2Q9BX26 1530 aa24.2■■□□□ 1.47
SNHG9-201ENST00000531523 MLECQ14165 292 aa24.18■■□□□ 1.46
SNHG9-201ENST00000531523 TIAM1Q13009 1591 aa24.17■■□□□ 1.46
SNHG9-201ENST00000531523 AGLP35573 1532 aa24.17■■□□□ 1.46
SNHG9-201ENST00000531523 EHBP1L1Q8N3D4 1523 aa24.16■■□□□ 1.46
SNHG9-201ENST00000531523 INO80Q9ULG1 1556 aaPredicted RBP24.13■■□□□ 1.45
SNHG9-201ENST00000531523 ILDR1Q86SU0 546 aaPredicted RBP24.13■■□□□ 1.45
SNHG9-201ENST00000531523 PREX1Q8TCU6 1659 aa24.12■■□□□ 1.45
SNHG9-201ENST00000531523 MTUS2Q5JR59 1369 aa24.11■■□□□ 1.45
SNHG9-201ENST00000531523 C3P01024 1663 aa24.1■■□□□ 1.45
SNHG9-201ENST00000531523 KIAA1107Q9UPP5 1409 aa24.1■■□□□ 1.45
SNHG9-201ENST00000531523 ATP7AQ04656 1500 aa24.08■■□□□ 1.45
SNHG9-201ENST00000531523 PLXNC1O60486 1568 aa24.08■■□□□ 1.44
SNHG9-201ENST00000531523 PLEKHH2Q8IVE3 1493 aa24.07■■□□□ 1.44
SNHG9-201ENST00000531523 CCNB3Q8WWL7 1395 aa24.07■■□□□ 1.44
SNHG9-201ENST00000531523 PLPPR3Q6T4P5 718 aa24.06■■□□□ 1.44
SNHG9-201ENST00000531523 ZNF777Q9ULD5 760 aaPredicted RBP24.05■■□□□ 1.44
SNHG9-201ENST00000531523 HNRNPMP52272 730 aaKnown RBP eCLIP24.03■■□□□ 1.44
SNHG9-201ENST00000531523 HSPA2P54652 639 aa24.03■■□□□ 1.44
SNHG9-201ENST00000531523 MYT1LQ9UL68 1186 aa24.03■■□□□ 1.44
SNHG9-201ENST00000531523 SUPT6HQ7KZ85 1726 aaKnown RBP24.03■■□□□ 1.44
SNHG9-201ENST00000531523 CEBPAP49715 358 aaPredicted RBP24.02■■□□□ 1.44
SNHG9-201ENST00000531523 CFDP1Q9UEE9 299 aaPredicted RBP24.02■■□□□ 1.44
SNHG9-201ENST00000531523 MBD5Q9P267 1494 aa24.01■■□□□ 1.43
SNHG9-201ENST00000531523 MROH2AA6NES4 1674 aa24■■□□□ 1.43
SNHG9-201ENST00000531523 NCOA2Q15596 1464 aa23.99■■□□□ 1.43
SNHG9-201ENST00000531523 ADGBQ8N7X0 1667 aa23.99■■□□□ 1.43
SNHG9-201ENST00000531523 SPAG9O60271 1321 aaKnown RBP23.98■■□□□ 1.43
SNHG9-201ENST00000531523 STRCQ7RTU9 1775 aa23.97■■□□□ 1.43
SNHG9-201ENST00000531523 VPS8Q8N3P4 1428 aa23.97■■□□□ 1.43
SNHG9-201ENST00000531523 ZNF644Q9H582 1327 aaPredicted RBP23.97■■□□□ 1.43
SNHG9-201ENST00000531523 SETD1BQ9UPS6 1966 aaKnown RBP23.97■■□□□ 1.43
SNHG9-201ENST00000531523 LOC105371045A0A1W2PR82 267 aa23.96■■□□□ 1.43
SNHG9-201ENST00000531523 A2MP01023 1474 aa23.95■■□□□ 1.42
SNHG9-201ENST00000531523 CNTLNQ9NXG0 1405 aa23.93■■□□□ 1.42
SNHG9-201ENST00000531523 CAMSAP2Q08AD1 1489 aa23.92■■□□□ 1.42
SNHG9-201ENST00000531523 CLTCQ00610 1675 aaKnown RBP23.92■■□□□ 1.42
SNHG9-201ENST00000531523 UHRF1BP1Q6BDS2 1440 aa23.92■■□□□ 1.42
SNHG9-201ENST00000531523 LRRC9Q6ZRR7 1453 aa23.9■■□□□ 1.42
SNHG9-201ENST00000531523 RTEL1-TNFRSF6BF6WH68 1400 aa23.89■■□□□ 1.41
SNHG9-201ENST00000531523 MAP3K1Q13233 1512 aa23.87■■□□□ 1.41
SNHG9-201ENST00000531523 CCDC141Q6ZP82 1450 aa23.87■■□□□ 1.41
SNHG9-201ENST00000531523 ARHGEF5Q12774 1597 aa23.86■■□□□ 1.41
SNHG9-201ENST00000531523 NPATQ14207 1427 aa23.84■■□□□ 1.41
SNHG9-201ENST00000531523 FBXO41Q8TF61 875 aa23.82■■□□□ 1.4
SNHG9-201ENST00000531523 ZNF142P52746 1687 aaPredicted RBP23.82■■□□□ 1.4
SNHG9-201ENST00000531523 ZMYM3Q14202 1370 aa23.81■■□□□ 1.4
SNHG9-201ENST00000531523 MYO3AQ8NEV4 1616 aa23.81■■□□□ 1.4
SNHG9-201ENST00000531523 ESF1Q9H501 851 aaKnown RBP23.79■■□□□ 1.4
SNHG9-201ENST00000531523 DHX29Q7Z478 1369 aaKnown RBP23.78■■□□□ 1.4
SNHG9-201ENST00000531523 PTPRKQ15262 1439 aa23.77■■□□□ 1.4
SNHG9-201ENST00000531523 KANK4Q5T7N3 995 aaPredicted RBP23.77■■□□□ 1.4
SNHG9-201ENST00000531523 MAST1Q9Y2H9 1570 aa23.77■■□□□ 1.4
SNHG9-201ENST00000531523 NCOA1Q15788 1441 aa23.75■■□□□ 1.39
SNHG9-201ENST00000531523 CAMSAP1Q5T5Y3 1602 aa23.73■■□□□ 1.39
SNHG9-201ENST00000531523 GGT6Q6P531 493 aa23.72■■□□□ 1.39
SNHG9-201ENST00000531523 PTPRTO14522 1441 aa23.72■■□□□ 1.39
SNHG9-201ENST00000531523 FAM135AQ9P2D6 1515 aa23.72■■□□□ 1.39
SNHG9-201ENST00000531523 CEP170BQ9Y4F5 1589 aaPredicted RBP23.72■■□□□ 1.39
SNHG9-201ENST00000531523 MYOM3Q5VTT5 1437 aa23.71■■□□□ 1.39
SNHG9-201ENST00000531523 KDM5DQ9BY66 1539 aa23.7■■□□□ 1.38
SNHG9-201ENST00000531523 RSPH4AQ5TD94 716 aa23.7■■□□□ 1.38
SNHG9-201ENST00000531523 RNF17Q9BXT8 1623 aaKnown RBP23.7■■□□□ 1.38
SNHG9-201ENST00000531523 MIA2Q96PC5 1412 aa23.69■■□□□ 1.38
SNHG9-201ENST00000531523 PPP6R1Q9UPN7 881 aa23.69■■□□□ 1.38
SNHG9-201ENST00000531523 CROCC2H7BZ55 1655 aa23.67■■□□□ 1.38
Retrieved 100 of 20,778 RNA–protein pairs in 8.4 ms