RNA–Protein interactions for RNA: ENST00000531513.5

USP47-211, Transcript of ubiquitin specific peptidase 47, humanhuman

TSL 2

Gene USP47, Length 936 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP47-211ENST00000531513 FBXO22Q8NEZ5 403 aa12.57□□□□□ -0.4
USP47-211ENST00000531513 RGL2O15211 777 aa12.56□□□□□ -0.4
USP47-211ENST00000531513 NLRP6P59044 892 aa12.56□□□□□ -0.4
USP47-211ENST00000531513 DOK7Q18PE1 504 aa12.56□□□□□ -0.4
USP47-211ENST00000531513 ZNF710Q8N1W2 664 aa12.55□□□□□ -0.4
USP47-211ENST00000531513 MFRPQ9BY79 579 aa12.54□□□□□ -0.4
USP47-211ENST00000531513 HOXB1P14653 301 aaPredicted RBP12.52□□□□□ -0.41
USP47-211ENST00000531513 RIMBP2O15034 1052 aa12.48□□□□□ -0.41
USP47-211ENST00000531513 ERBB3P21860 1342 aa12.42□□□□□ -0.42
USP47-211ENST00000531513 ZSWIM6Q9HCJ5 1215 aa12.42□□□□□ -0.42
USP47-211ENST00000531513 GPR153Q6NV75 609 aa12.38□□□□□ -0.43
USP47-211ENST00000531513 VARS2Q5ST30 1063 aaKnown RBP12.37□□□□□ -0.43
USP47-211ENST00000531513 C2orf72A6NCS6 295 aa12.35□□□□□ -0.43
USP47-211ENST00000531513 KIF3CO14782 793 aa12.35□□□□□ -0.43
USP47-211ENST00000531513 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
USP47-211ENST00000531513 PPP1R37O75864 691 aa12.31□□□□□ -0.44
USP47-211ENST00000531513 KHSRPQ92945 711 aaKnown RBP eCLIP12.3□□□□□ -0.44
USP47-211ENST00000531513 HS6ST3Q8IZP7 471 aa12.29□□□□□ -0.44
USP47-211ENST00000531513 RNF166Q96A37 237 aaPredicted RBP12.28□□□□□ -0.44
USP47-211ENST00000531513 ZNF687Q8N1G0 1237 aa12.26□□□□□ -0.45
USP47-211ENST00000531513 TMC2Q8TDI7 906 aa12.25□□□□□ -0.45
USP47-211ENST00000531513 ZNF316A6NFI3 1004 aaPredicted RBP12.23□□□□□ -0.45
USP47-211ENST00000531513 CHGAP10645 457 aaKnown RBP12.21□□□□□ -0.45
USP47-211ENST00000531513 MYT1LQ9UL68 1186 aa12.21□□□□□ -0.45
USP47-211ENST00000531513 NUDT7P0C024 238 aa12.2□□□□□ -0.46
USP47-211ENST00000531513 SLC34A2O95436 690 aa12.19□□□□□ -0.46
USP47-211ENST00000531513 PCDHGA4Q9Y5G9 962 aa12.19□□□□□ -0.46
USP47-211ENST00000531513 NKX1-1Q15270 411 aaPredicted RBP12.14□□□□□ -0.47
USP47-211ENST00000531513 LHX6Q9UPM6 363 aa12.13□□□□□ -0.47
USP47-211ENST00000531513 DNAJC5Q9H3Z4 198 aa12.11□□□□□ -0.47
USP47-211ENST00000531513 PTGER2P43116 358 aa12.1□□□□□ -0.47
USP47-211ENST00000531513 FOXK1P85037 733 aa12.09□□□□□ -0.47
USP47-211ENST00000531513 LSM11P83369 360 aaKnown RBP eCLIP12.08□□□□□ -0.48
USP47-211ENST00000531513 ANKRD13DQ6ZTN6 518 aa12.08□□□□□ -0.48
USP47-211ENST00000531513 PLPP6Q8IY26 295 aa12.08□□□□□ -0.48
USP47-211ENST00000531513 GPHNQ9NQX3 736 aaPredicted RBP12.08□□□□□ -0.48
USP47-211ENST00000531513 DSG2Q14126 1118 aa12.07□□□□□ -0.48
USP47-211ENST00000531513 PTCD2Q8WV60 388 aaKnown RBP12.06□□□□□ -0.48
USP47-211ENST00000531513 PBX2P40425 430 aa12.05□□□□□ -0.48
USP47-211ENST00000531513 POTEEQ6S8J3 1075 aa12.05□□□□□ -0.48
USP47-211ENST00000531513 KDM4FA0A1W2PPD8 638 aa12.03□□□□□ -0.48
USP47-211ENST00000531513 AXIN2Q9Y2T1 843 aa12.03□□□□□ -0.48
USP47-211ENST00000531513 RYDENQ9NUL5 291 aaKnown RBP12.02□□□□□ -0.49
USP47-211ENST00000531513 PSDA5PKW4 1024 aaPredicted RBP11.98□□□□□ -0.49
USP47-211ENST00000531513 CRISPLD2Q9H0B8 497 aa11.97□□□□□ -0.49
USP47-211ENST00000531513 TBC1D12O60347 775 aa11.94□□□□□ -0.5
USP47-211ENST00000531513 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
USP47-211ENST00000531513 GTPBP6O43824 516 aaPredicted RBP11.93□□□□□ -0.5
USP47-211ENST00000531513 PPP1R15BQ5SWA1 713 aa11.93□□□□□ -0.5
USP47-211ENST00000531513 NCKAP5LQ9HCH0 1330 aa11.92□□□□□ -0.5
USP47-211ENST00000531513 DCAF8L2P0C7V8 631 aa11.92□□□□□ -0.5
USP47-211ENST00000531513 OXER1Q8TDS5 423 aa11.92□□□□□ -0.5
USP47-211ENST00000531513 UPF1Q92900 1129 aaKnown RBP eCLIP11.92□□□□□ -0.5
USP47-211ENST00000531513 PPP4R3BQ5MIZ7 849 aa11.9□□□□□ -0.5
USP47-211ENST00000531513 ADGRD1Q6QNK2 874 aa11.9□□□□□ -0.5
USP47-211ENST00000531513 PSEN2P49810 448 aa11.89□□□□□ -0.51
USP47-211ENST00000531513 DMRTA1Q5VZB9 504 aa11.88□□□□□ -0.51
USP47-211ENST00000531513 PDE4AP27815 886 aa11.85□□□□□ -0.51
USP47-211ENST00000531513 TK2O00142 265 aa11.83□□□□□ -0.52
USP47-211ENST00000531513 KCNK17Q96T54 332 aa11.83□□□□□ -0.52
USP47-211ENST00000531513 PLA2G2EQ9NZK7 142 aa11.82□□□□□ -0.52
USP47-211ENST00000531513 ZNF454Q8N9F8 522 aa11.81□□□□□ -0.52
USP47-211ENST00000531513 LARP6Q9BRS8 491 aaKnown RBP11.81□□□□□ -0.52
USP47-211ENST00000531513 HRO43593 1189 aa11.8□□□□□ -0.52
USP47-211ENST00000531513 DDX27Q96GQ7 796 aaKnown RBP11.8□□□□□ -0.52
USP47-211ENST00000531513 MFSD10Q14728 455 aa11.78□□□□□ -0.52
USP47-211ENST00000531513 HCSTQ9UBK5 93 aa11.78□□□□□ -0.52
USP47-211ENST00000531513 KCNH8Q96L42 1107 aa11.77□□□□□ -0.53
USP47-211ENST00000531513 FOSBP53539 338 aa11.76□□□□□ -0.53
USP47-211ENST00000531513 EVI5O60447 810 aa11.75□□□□□ -0.53
USP47-211ENST00000531513 CADPS2Q86UW7 1296 aa11.75□□□□□ -0.53
USP47-211ENST00000531513 BCL2L12Q9HB09 334 aa11.75□□□□□ -0.53
USP47-211ENST00000531513 ANO8Q9HCE9 1232 aaPredicted RBP11.74□□□□□ -0.53
USP47-211ENST00000531513 JPH4Q96JJ6 628 aa11.73□□□□□ -0.53
USP47-211ENST00000531513 EMILIN3Q9NT22 766 aa11.72□□□□□ -0.53
USP47-211ENST00000531513 VPS9D1Q9Y2B5 631 aa11.72□□□□□ -0.53
USP47-211ENST00000531513 MAP3K9P80192 1104 aa11.7□□□□□ -0.54
USP47-211ENST00000531513 KCTD12Q96CX2 325 aaKnown RBP11.7□□□□□ -0.54
USP47-211ENST00000531513 PTPREP23469 700 aa11.69□□□□□ -0.54
USP47-211ENST00000531513 STAC3Q96MF2 364 aa11.69□□□□□ -0.54
USP47-211ENST00000531513 ADAM33Q9BZ11 813 aa11.68□□□□□ -0.54
USP47-211ENST00000531513 ZDHHC16Q969W1 377 aa11.67□□□□□ -0.54
USP47-211ENST00000531513 SLC4A5Q9BY07 1137 aa11.66□□□□□ -0.54
USP47-211ENST00000531513 ZBED2Q9BTP6 218 aa11.65□□□□□ -0.54
USP47-211ENST00000531513 PCDHGA10Q9Y5H3 936 aa11.61□□□□□ -0.55
USP47-211ENST00000531513 BHMG1C9JSJ3 638 aaPredicted RBP11.6□□□□□ -0.55
USP47-211ENST00000531513 BBXQ8WY36 941 aaPredicted RBP11.6□□□□□ -0.55
USP47-211ENST00000531513 CAMK2BQ13554 666 aa11.59□□□□□ -0.55
USP47-211ENST00000531513 PPP1R3GB7ZBB8 358 aa11.56□□□□□ -0.56
USP47-211ENST00000531513 DPYSL4O14531 572 aa11.56□□□□□ -0.56
USP47-211ENST00000531513 PTPN5P54829 565 aa11.56□□□□□ -0.56
USP47-211ENST00000531513 PHF14O94880 888 aa11.55□□□□□ -0.56
USP47-211ENST00000531513 TYW1BQ6NUM6 668 aa11.55□□□□□ -0.56
USP47-211ENST00000531513 MRPL50Q8N5N7 158 aaKnown RBP11.55□□□□□ -0.56
USP47-211ENST00000531513 COL9A1P20849 921 aa11.54□□□□□ -0.56
USP47-211ENST00000531513 THSD4Q6ZMP0 1018 aa11.54□□□□□ -0.56
USP47-211ENST00000531513 FBXW7Q969H0 707 aa11.54□□□□□ -0.56
USP47-211ENST00000531513 GOLGA8CPA6NN73 597 aa11.53□□□□□ -0.56
USP47-211ENST00000531513 PROX2Q3B8N5 592 aa11.53□□□□□ -0.56
USP47-211ENST00000531513 WNT2BQ93097 391 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 59.7 ms