RNA–Protein interactions for RNA: ENST00000531405.5

SSSCA1-206, Transcript of Sjogren syndrome/scleroderma autoantigen 1, humanhuman

TSL 2 BASIC

Gene SSSCA1, Length 879 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSSCA1-206ENST00000531405 PLCH2O75038 1416 aa30.5■■■□□ 2.47
SSSCA1-206ENST00000531405 SCAPERQ9BY12 1400 aa30.46■■■□□ 2.47
SSSCA1-206ENST00000531405 PCF11O94913 1555 aaKnown RBP30.45■■■□□ 2.47
SSSCA1-206ENST00000531405 POGZQ7Z3K3 1410 aa30.45■■■□□ 2.46
SSSCA1-206ENST00000531405 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
SSSCA1-206ENST00000531405 MAGI2Q86UL8 1455 aa30.43■■■□□ 2.46
SSSCA1-206ENST00000531405 LMTK3Q96Q04 1460 aa30.42■■■□□ 2.46
SSSCA1-206ENST00000531405 CDK11AQ9UQ88 783 aaPredicted RBP30.38■■■□□ 2.45
SSSCA1-206ENST00000531405 PLPPR3Q6T4P5 718 aa30.37■■■□□ 2.45
SSSCA1-206ENST00000531405 TROQ12816 1431 aaPredicted RBP30.37■■■□□ 2.45
SSSCA1-206ENST00000531405 EFCAB2Q5VUJ9 269 aa30.35■■■□□ 2.45
SSSCA1-206ENST00000531405 CDC42BPBQ9Y5S2 1711 aa30.35■■■□□ 2.45
SSSCA1-206ENST00000531405 ARHGAP5Q13017 1502 aa30.34■■■□□ 2.45
SSSCA1-206ENST00000531405 MLECQ14165 292 aa30.34■■■□□ 2.45
SSSCA1-206ENST00000531405 CLIP1P30622 1438 aa30.31■■■□□ 2.44
SSSCA1-206ENST00000531405 ATP10AO60312 1499 aa30.3■■■□□ 2.44
SSSCA1-206ENST00000531405 C9orf84Q5VXU9 1444 aa30.28■■■□□ 2.44
SSSCA1-206ENST00000531405 ZNF518AQ6AHZ1 1483 aa30.26■■■□□ 2.44
SSSCA1-206ENST00000531405 KDM5CP41229 1560 aa30.26■■■□□ 2.43
SSSCA1-206ENST00000531405 PREX2Q70Z35 1606 aa30.25■■■□□ 2.43
SSSCA1-206ENST00000531405 ARHGEF12Q9NZN5 1544 aa30.25■■■□□ 2.43
SSSCA1-206ENST00000531405 CASKIN1Q8WXD9 1431 aa30.23■■■□□ 2.43
SSSCA1-206ENST00000531405 HSPA2P54652 639 aa30.23■■■□□ 2.43
SSSCA1-206ENST00000531405 CCDC18Q5T9S5 1454 aa30.21■■■□□ 2.43
SSSCA1-206ENST00000531405 AFAP1Q8N556 730 aa30.21■■■□□ 2.43
SSSCA1-206ENST00000531405 CDC42BPAQ5VT25 1732 aa30.21■■■□□ 2.43
SSSCA1-206ENST00000531405 ITSN2Q9NZM3 1697 aa30.2■■■□□ 2.42
SSSCA1-206ENST00000531405 DIP2CQ9Y2E4 1556 aa30.2■■■□□ 2.42
SSSCA1-206ENST00000531405 ABCA6Q8N139 1617 aa30.18■■■□□ 2.42
SSSCA1-206ENST00000531405 FBXO41Q8TF61 875 aa30.17■■■□□ 2.42
SSSCA1-206ENST00000531405 PREX1Q8TCU6 1659 aa30.16■■■□□ 2.42
SSSCA1-206ENST00000531405 ABCC1P33527 1531 aa30.16■■■□□ 2.42
SSSCA1-206ENST00000531405 MYT1LQ9UL68 1186 aa30.14■■■□□ 2.42
SSSCA1-206ENST00000531405 FYCO1Q9BQS8 1478 aa30.12■■■□□ 2.41
SSSCA1-206ENST00000531405 REREQ9P2R6 1566 aa30.11■■■□□ 2.41
SSSCA1-206ENST00000531405 TRAPPC8Q9Y2L5 1435 aa30.1■■■□□ 2.41
SSSCA1-206ENST00000531405 CEBPAP49715 358 aaPredicted RBP30.09■■■□□ 2.41
SSSCA1-206ENST00000531405 KIDINS220Q9ULH0 1771 aa30.08■■■□□ 2.41
SSSCA1-206ENST00000531405 MLH3Q9UHC1 1453 aa30.08■■■□□ 2.41
SSSCA1-206ENST00000531405 C3P01024 1663 aa30.04■■■□□ 2.4
SSSCA1-206ENST00000531405 SETD1BQ9UPS6 1966 aaKnown RBP30.03■■■□□ 2.4
SSSCA1-206ENST00000531405 SAMD9LQ8IVG5 1584 aa30.03■■■□□ 2.4
SSSCA1-206ENST00000531405 STRCQ7RTU9 1775 aa29.98■■■□□ 2.39
SSSCA1-206ENST00000531405 AGLP35573 1532 aa29.98■■■□□ 2.39
SSSCA1-206ENST00000531405 SYCP2Q9BX26 1530 aa29.97■■■□□ 2.39
SSSCA1-206ENST00000531405 ZNF777Q9ULD5 760 aaPredicted RBP29.96■■■□□ 2.39
SSSCA1-206ENST00000531405 GPATCH8Q9UKJ3 1502 aaKnown RBP29.95■■■□□ 2.38
SSSCA1-206ENST00000531405 SUPT6HQ7KZ85 1726 aaKnown RBP29.91■■■□□ 2.38
SSSCA1-206ENST00000531405 UHRF1BP1Q6BDS2 1440 aa29.91■■■□□ 2.38
SSSCA1-206ENST00000531405 HNRNPMP52272 730 aaKnown RBP eCLIP29.86■■■□□ 2.37
SSSCA1-206ENST00000531405 ESF1Q9H501 851 aaKnown RBP29.86■■■□□ 2.37
SSSCA1-206ENST00000531405 CERKQ8TCT0 537 aa29.85■■■□□ 2.37
SSSCA1-206ENST00000531405 ATP7AQ04656 1500 aa29.84■■■□□ 2.37
SSSCA1-206ENST00000531405 INO80Q9ULG1 1556 aaPredicted RBP29.84■■■□□ 2.37
SSSCA1-206ENST00000531405 SPAG9O60271 1321 aaKnown RBP29.83■■■□□ 2.37
SSSCA1-206ENST00000531405 MROH2AA6NES4 1674 aa29.82■■■□□ 2.36
SSSCA1-206ENST00000531405 CCNB3Q8WWL7 1395 aa29.82■■■□□ 2.36
SSSCA1-206ENST00000531405 MTUS2Q5JR59 1369 aa29.81■■■□□ 2.36
SSSCA1-206ENST00000531405 CFDP1Q9UEE9 299 aaPredicted RBP29.8■■■□□ 2.36
SSSCA1-206ENST00000531405 PLEKHH2Q8IVE3 1493 aa29.79■■■□□ 2.36
SSSCA1-206ENST00000531405 CNTLNQ9NXG0 1405 aa29.79■■■□□ 2.36
SSSCA1-206ENST00000531405 KIAA1107Q9UPP5 1409 aa29.79■■■□□ 2.36
SSSCA1-206ENST00000531405 CLTCQ00610 1675 aaKnown RBP29.79■■■□□ 2.36
SSSCA1-206ENST00000531405 TIAM1Q13009 1591 aa29.78■■■□□ 2.36
SSSCA1-206ENST00000531405 PLXNC1O60486 1568 aa29.77■■■□□ 2.36
SSSCA1-206ENST00000531405 EHBP1L1Q8N3D4 1523 aa29.75■■■□□ 2.35
SSSCA1-206ENST00000531405 DMRT2Q9Y5R5 561 aa29.74■■■□□ 2.35
SSSCA1-206ENST00000531405 ADGBQ8N7X0 1667 aa29.73■■■□□ 2.35
SSSCA1-206ENST00000531405 A2MP01023 1474 aa29.72■■■□□ 2.35
SSSCA1-206ENST00000531405 CEP162Q5TB80 1403 aa29.7■■■□□ 2.34
SSSCA1-206ENST00000531405 ZNF644Q9H582 1327 aaPredicted RBP29.7■■■□□ 2.34
SSSCA1-206ENST00000531405 ZMYM3Q14202 1370 aa29.67■■■□□ 2.34
SSSCA1-206ENST00000531405 PTPRTO14522 1441 aa29.66■■■□□ 2.34
SSSCA1-206ENST00000531405 NPATQ14207 1427 aa29.66■■■□□ 2.34
SSSCA1-206ENST00000531405 CAMSAP1Q5T5Y3 1602 aa29.64■■■□□ 2.34
SSSCA1-206ENST00000531405 MYO3AQ8NEV4 1616 aa29.64■■■□□ 2.34
SSSCA1-206ENST00000531405 NCOA1Q15788 1441 aa29.64■■■□□ 2.34
SSSCA1-206ENST00000531405 MBD5Q9P267 1494 aa29.63■■■□□ 2.33
SSSCA1-206ENST00000531405 ZNF142P52746 1687 aaPredicted RBP29.62■■■□□ 2.33
SSSCA1-206ENST00000531405 GGT6Q6P531 493 aa29.61■■■□□ 2.33
SSSCA1-206ENST00000531405 LTBP4Q8N2S1 1624 aa29.57■■■□□ 2.32
SSSCA1-206ENST00000531405 NCOA2Q15596 1464 aa29.55■■■□□ 2.32
SSSCA1-206ENST00000531405 PTPRKQ15262 1439 aa29.55■■■□□ 2.32
SSSCA1-206ENST00000531405 CEP170BQ9Y4F5 1589 aaPredicted RBP29.55■■■□□ 2.32
SSSCA1-206ENST00000531405 CAMSAP2Q08AD1 1489 aa29.54■■■□□ 2.32
SSSCA1-206ENST00000531405 RTEL1-TNFRSF6BF6WH68 1400 aa29.53■■■□□ 2.32
SSSCA1-206ENST00000531405 CCDC141Q6ZP82 1450 aa29.5■■■□□ 2.31
SSSCA1-206ENST00000531405 NCKAP5LQ9HCH0 1330 aa29.49■■■□□ 2.31
SSSCA1-206ENST00000531405 DHX29Q7Z478 1369 aaKnown RBP29.47■■■□□ 2.31
SSSCA1-206ENST00000531405 PPP6R1Q9UPN7 881 aa29.45■■■□□ 2.31
SSSCA1-206ENST00000531405 PLA2R1Q13018 1463 aa29.44■■■□□ 2.3
SSSCA1-206ENST00000531405 ARHGEF5Q12774 1597 aa29.42■■■□□ 2.3
SSSCA1-206ENST00000531405 DNMT1P26358 1616 aaKnown RBP29.42■■■□□ 2.3
SSSCA1-206ENST00000531405 TCOF1Q13428 1488 aaKnown RBP29.41■■■□□ 2.3
SSSCA1-206ENST00000531405 KIF3BO15066 747 aa29.4■■■□□ 2.3
SSSCA1-206ENST00000531405 IQSEC2Q5JU85 1478 aa29.4■■■□□ 2.3
SSSCA1-206ENST00000531405 KDM5DQ9BY66 1539 aa29.39■■■□□ 2.3
SSSCA1-206ENST00000531405 VPS8Q8N3P4 1428 aa29.38■■■□□ 2.29
SSSCA1-206ENST00000531405 A2ML1A8K2U0 1454 aa29.38■■■□□ 2.29
SSSCA1-206ENST00000531405 LOC105371045A0A1W2PR82 267 aa29.38■■■□□ 2.29
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms