RNA–Protein interactions for RNA: ENST00000531062.1

CHEK1-211, Transcript of checkpoint kinase 1, humanhuman

TSL 2

Gene CHEK1, Length 772 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-211ENST00000531062 CADPS2Q86UW7 1296 aa13.38□□□□□ -0.27
CHEK1-211ENST00000531062 PCDH10Q9P2E7 1040 aa13.35□□□□□ -0.27
CHEK1-211ENST00000531062 MAMSTRQ6ZN01 415 aa13.33□□□□□ -0.28
CHEK1-211ENST00000531062 CRISPLD2Q9H0B8 497 aa13.32□□□□□ -0.28
CHEK1-211ENST00000531062 TMEM92Q6UXU6 159 aa13.31□□□□□ -0.28
CHEK1-211ENST00000531062 KIF3CO14782 793 aa13.3□□□□□ -0.28
CHEK1-211ENST00000531062 C3orf67Q6ZVT6 689 aa13.3□□□□□ -0.28
CHEK1-211ENST00000531062 NCKAP5LQ9HCH0 1330 aa13.3□□□□□ -0.28
CHEK1-211ENST00000531062 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.29□□□□□ -0.28
CHEK1-211ENST00000531062 GPHNQ9NQX3 736 aaPredicted RBP13.28□□□□□ -0.28
CHEK1-211ENST00000531062 VSIG10Q8N0Z9 540 aa13.27□□□□□ -0.29
CHEK1-211ENST00000531062 SCUBE2Q9NQ36 999 aa13.27□□□□□ -0.29
CHEK1-211ENST00000531062 PDE4AP27815 886 aa13.26□□□□□ -0.29
CHEK1-211ENST00000531062 KDM2AQ9Y2K7 1162 aa13.25□□□□□ -0.29
CHEK1-211ENST00000531062 MFSD10Q14728 455 aa13.24□□□□□ -0.29
CHEK1-211ENST00000531062 C2orf72A6NCS6 295 aa13.23□□□□□ -0.29
CHEK1-211ENST00000531062 TMC2Q8TDI7 906 aa13.21□□□□□ -0.29
CHEK1-211ENST00000531062 FOXK1P85037 733 aa13.19□□□□□ -0.3
CHEK1-211ENST00000531062 LARP6Q9BRS8 491 aaKnown RBP13.19□□□□□ -0.3
CHEK1-211ENST00000531062 WDR70Q9NW82 654 aa13.18□□□□□ -0.3
CHEK1-211ENST00000531062 SLAIN1Q8ND83 568 aa13.17□□□□□ -0.3
CHEK1-211ENST00000531062 DSG2Q14126 1118 aa13.16□□□□□ -0.3
CHEK1-211ENST00000531062 DDX27Q96GQ7 796 aaKnown RBP13.15□□□□□ -0.3
CHEK1-211ENST00000531062 PPP1R15BQ5SWA1 713 aa13.13□□□□□ -0.31
CHEK1-211ENST00000531062 PLPP6Q8IY26 295 aa13.11□□□□□ -0.31
CHEK1-211ENST00000531062 CAMK2BQ13554 666 aa13.1□□□□□ -0.31
CHEK1-211ENST00000531062 SLC34A2O95436 690 aa13.05□□□□□ -0.32
CHEK1-211ENST00000531062 HOXB3P14651 431 aaPredicted RBP13.04□□□□□ -0.32
CHEK1-211ENST00000531062 E2F4Q16254 413 aa13.04□□□□□ -0.32
CHEK1-211ENST00000531062 ARIH1Q9Y4X5 557 aaPredicted RBP13.02□□□□□ -0.33
CHEK1-211ENST00000531062 SNPHO15079 494 aa13□□□□□ -0.33
CHEK1-211ENST00000531062 EMILIN3Q9NT22 766 aa13□□□□□ -0.33
CHEK1-211ENST00000531062 PTCD2Q8WV60 388 aaKnown RBP12.99□□□□□ -0.33
CHEK1-211ENST00000531062 OXER1Q8TDS5 423 aa12.98□□□□□ -0.33
CHEK1-211ENST00000531062 FAM163AQ96GL9 167 aaPredicted RBP12.98□□□□□ -0.33
CHEK1-211ENST00000531062 DOK7Q18PE1 504 aa12.97□□□□□ -0.33
CHEK1-211ENST00000531062 KCNV2Q8TDN2 545 aa12.97□□□□□ -0.33
CHEK1-211ENST00000531062 P3H3Q8IVL6 736 aa12.95□□□□□ -0.34
CHEK1-211ENST00000531062 ARHGEF1Q92888 912 aaKnown RBP12.94□□□□□ -0.34
CHEK1-211ENST00000531062 ZSWIM6Q9HCJ5 1215 aa12.94□□□□□ -0.34
CHEK1-211ENST00000531062 LCE2DQ5TA82 110 aaPredicted RBP12.93□□□□□ -0.34
CHEK1-211ENST00000531062 GPR153Q6NV75 609 aa12.9□□□□□ -0.34
CHEK1-211ENST00000531062 PCDHGA4Q9Y5G9 962 aa12.9□□□□□ -0.34
CHEK1-211ENST00000531062 KDM4FA0A1W2PPD8 638 aa12.89□□□□□ -0.35
CHEK1-211ENST00000531062 RIMBP2O15034 1052 aa12.88□□□□□ -0.35
CHEK1-211ENST00000531062 TBC1D12O60347 775 aa12.87□□□□□ -0.35
CHEK1-211ENST00000531062 UPF1Q92900 1129 aaKnown RBP eCLIP12.87□□□□□ -0.35
CHEK1-211ENST00000531062 DPYSL4O14531 572 aa12.86□□□□□ -0.35
CHEK1-211ENST00000531062 HOXB1P14653 301 aaPredicted RBP12.85□□□□□ -0.35
CHEK1-211ENST00000531062 ZNF710Q8N1W2 664 aa12.85□□□□□ -0.35
CHEK1-211ENST00000531062 MAP3K9P80192 1104 aa12.84□□□□□ -0.35
CHEK1-211ENST00000531062 NBR1Q14596 966 aa12.84□□□□□ -0.35
CHEK1-211ENST00000531062 ANO8Q9HCE9 1232 aaPredicted RBP12.84□□□□□ -0.35
CHEK1-211ENST00000531062 ARSIQ5FYB1 569 aa12.83□□□□□ -0.36
CHEK1-211ENST00000531062 SPDYE16A6NNV3 312 aaPredicted RBP12.82□□□□□ -0.36
CHEK1-211ENST00000531062 ST18O60284 1047 aa12.82□□□□□ -0.36
CHEK1-211ENST00000531062 PDIA6Q15084 440 aa12.82□□□□□ -0.36
CHEK1-211ENST00000531062 BCANQ96GW7 911 aa12.8□□□□□ -0.36
CHEK1-211ENST00000531062 EVI5O60447 810 aa12.79□□□□□ -0.36
CHEK1-211ENST00000531062 KHSRPQ92945 711 aaKnown RBP eCLIP12.79□□□□□ -0.362e-7■■■□□ 18.7
CHEK1-211ENST00000531062 CDAN1Q8IWY9 1227 aa12.77□□□□□ -0.37
CHEK1-211ENST00000531062 PTGER2P43116 358 aa12.76□□□□□ -0.37
CHEK1-211ENST00000531062 NUDT7P0C024 238 aa12.75□□□□□ -0.37
CHEK1-211ENST00000531062 ZNF316A6NFI3 1004 aaPredicted RBP12.72□□□□□ -0.37
CHEK1-211ENST00000531062 TESPA1A2RU30 521 aaPredicted RBP12.7□□□□□ -0.38
CHEK1-211ENST00000531062 SEMA3EO15041 775 aa12.7□□□□□ -0.38
CHEK1-211ENST00000531062 LHX6Q9UPM6 363 aa12.68□□□□□ -0.38
CHEK1-211ENST00000531062 FOSBP53539 338 aa12.66□□□□□ -0.38
CHEK1-211ENST00000531062 TULP1O00294 542 aaPredicted RBP12.65□□□□□ -0.38
CHEK1-211ENST00000531062 MARVELD3Q96A59 401 aa12.65□□□□□ -0.38
CHEK1-211ENST00000531062 PSDA5PKW4 1024 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-211ENST00000531062 MLLT3P42568 568 aaPredicted RBP12.64□□□□□ -0.39
CHEK1-211ENST00000531062 JPH4Q96JJ6 628 aa12.64□□□□□ -0.39
CHEK1-211ENST00000531062 PHF14O94880 888 aa12.63□□□□□ -0.39
CHEK1-211ENST00000531062 EMP3P54852 163 aa12.63□□□□□ -0.39
CHEK1-211ENST00000531062 PCDHGA10Q9Y5H3 936 aa12.63□□□□□ -0.39
CHEK1-211ENST00000531062 DDX12PQ92771 950 aa12.61□□□□□ -0.39
CHEK1-211ENST00000531062 OSBPP22059 807 aa12.6□□□□□ -0.39
CHEK1-211ENST00000531062 EPAS1Q99814 870 aa12.6□□□□□ -0.39
CHEK1-211ENST00000531062 POTEB3A0JP26 581 aa12.59□□□□□ -0.39
CHEK1-211ENST00000531062 SMYD5Q6GMV2 418 aa12.59□□□□□ -0.39
CHEK1-211ENST00000531062 POTEBQ6S5H4 581 aa12.59□□□□□ -0.39
CHEK1-211ENST00000531062 ERBB3P21860 1342 aa12.59□□□□□ -0.39
CHEK1-211ENST00000531062 GRXCR2A6NFK2 248 aa12.57□□□□□ -0.4
CHEK1-211ENST00000531062 ZNF454Q8N9F8 522 aa12.57□□□□□ -0.4
CHEK1-211ENST00000531062 FAM205CA6NFA0 338 aa12.56□□□□□ -0.4
CHEK1-211ENST00000531062 VARS2Q5ST30 1063 aaKnown RBP12.56□□□□□ -0.4
CHEK1-211ENST00000531062 TYW1BQ6NUM6 668 aa12.56□□□□□ -0.4
CHEK1-211ENST00000531062 FBXW7Q969H0 707 aa12.56□□□□□ -0.4
CHEK1-211ENST00000531062 PRIM1P49642 420 aaKnown RBP12.55□□□□□ -0.4
CHEK1-211ENST00000531062 PPP4R3BQ5MIZ7 849 aa12.55□□□□□ -0.4
CHEK1-211ENST00000531062 ZDHHC16Q969W1 377 aa12.55□□□□□ -0.4
CHEK1-211ENST00000531062 HS3ST6Q96QI5 342 aa12.54□□□□□ -0.4
CHEK1-211ENST00000531062 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.53□□□□□ -0.4
CHEK1-211ENST00000531062 EN1Q05925 392 aaPredicted RBP12.52□□□□□ -0.41
CHEK1-211ENST00000531062 MMRN1Q13201 1228 aa12.52□□□□□ -0.41
CHEK1-211ENST00000531062 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
CHEK1-211ENST00000531062 ADAM33Q9BZ11 813 aa12.52□□□□□ -0.41
CHEK1-211ENST00000531062 BCL2L12Q9HB09 334 aa12.52□□□□□ -0.41
CHEK1-211ENST00000531062 POTEEQ6S8J3 1075 aa12.48□□□□□ -0.41
Retrieved 100 of 20,778 RNA–protein pairs in 38.6 ms