RNA–Protein interactions for RNA: ENST00000531034.1

PTP4A1P6-201, Transcript of protein tyrosine phosphatase type IVA, member 1 pseudogene 6, humanhuman

BASIC

Gene PTP4A1P6, Length 478 nt, Biotype transcribed processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A1P6-201ENST00000531034 ZNF687Q8N1G0 1237 aa8.94□□□□□ -0.98
PTP4A1P6-201ENST00000531034 POTEB3A0JP26 581 aa8.93□□□□□ -0.98
PTP4A1P6-201ENST00000531034 VARS2Q5ST30 1063 aaKnown RBP8.93□□□□□ -0.98
PTP4A1P6-201ENST00000531034 POTEBQ6S5H4 581 aa8.93□□□□□ -0.98
PTP4A1P6-201ENST00000531034 RNF25Q96BH1 459 aaPredicted RBP8.93□□□□□ -0.98
PTP4A1P6-201ENST00000531034 PHF8Q9UPP1 1060 aa8.92□□□□□ -0.98
PTP4A1P6-201ENST00000531034 GPR153Q6NV75 609 aa8.9□□□□□ -0.98
PTP4A1P6-201ENST00000531034 RNF166Q96A37 237 aaPredicted RBP8.9□□□□□ -0.98
PTP4A1P6-201ENST00000531034 MS4A4AQ96JQ5 239 aa8.9□□□□□ -0.98
PTP4A1P6-201ENST00000531034 BCL11BQ9C0K0 894 aaPredicted RBP8.9□□□□□ -0.98
PTP4A1P6-201ENST00000531034 STK24Q9Y6E0 443 aa8.89□□□□□ -0.99
PTP4A1P6-201ENST00000531034 MYT1LQ9UL68 1186 aa8.88□□□□□ -0.99
PTP4A1P6-201ENST00000531034 STK25O00506 426 aa8.87□□□□□ -0.99
PTP4A1P6-201ENST00000531034 PBX2P40425 430 aa8.87□□□□□ -0.99
PTP4A1P6-201ENST00000531034 TMEM92Q6UXU6 159 aa8.87□□□□□ -0.99
PTP4A1P6-201ENST00000531034 FBXO22Q8NEZ5 403 aa8.86□□□□□ -0.99
PTP4A1P6-201ENST00000531034 PSDA5PKW4 1024 aaPredicted RBP8.85□□□□□ -0.99
PTP4A1P6-201ENST00000531034 ECM2O94769 699 aaPredicted RBP8.85□□□□□ -0.99
PTP4A1P6-201ENST00000531034 ZNF316A6NFI3 1004 aaPredicted RBP8.84□□□□□ -0.99
PTP4A1P6-201ENST00000531034 SLC34A2O95436 690 aa8.83□□□□□ -1
PTP4A1P6-201ENST00000531034 TMC2Q8TDI7 906 aa8.82□□□□□ -1
PTP4A1P6-201ENST00000531034 ARSIQ5FYB1 569 aa8.81□□□□□ -1
PTP4A1P6-201ENST00000531034 MFRPQ9BY79 579 aa8.8□□□□□ -1
PTP4A1P6-201ENST00000531034 KIF3CO14782 793 aa8.79□□□□□ -1
PTP4A1P6-201ENST00000531034 LSM11P83369 360 aaKnown RBP eCLIP8.77□□□□□ -1.01
PTP4A1P6-201ENST00000531034 C2orf72A6NCS6 295 aa8.76□□□□□ -1.01
PTP4A1P6-201ENST00000531034 RYDENQ9NUL5 291 aaKnown RBP8.75□□□□□ -1.01
PTP4A1P6-201ENST00000531034 ANKRD13DQ6ZTN6 518 aa8.74□□□□□ -1.01
PTP4A1P6-201ENST00000531034 PCDHGA4Q9Y5G9 962 aa8.72□□□□□ -1.01
PTP4A1P6-201ENST00000531034 TBC1D12O60347 775 aa8.71□□□□□ -1.02
PTP4A1P6-201ENST00000531034 KCNH8Q96L42 1107 aa8.71□□□□□ -1.02
PTP4A1P6-201ENST00000531034 NUDT7P0C024 238 aa8.7□□□□□ -1.02
PTP4A1P6-201ENST00000531034 HCSTQ9UBK5 93 aa8.68□□□□□ -1.02
PTP4A1P6-201ENST00000531034 TK2O00142 265 aa8.67□□□□□ -1.02
PTP4A1P6-201ENST00000531034 ARHGAP33O14559 1287 aa8.67□□□□□ -1.02
PTP4A1P6-201ENST00000531034 PKD2Q13563 968 aa8.67□□□□□ -1.02
PTP4A1P6-201ENST00000531034 LHX6Q9UPM6 363 aa8.67□□□□□ -1.02
PTP4A1P6-201ENST00000531034 RGL2O15211 777 aa8.66□□□□□ -1.02
PTP4A1P6-201ENST00000531034 FOXK1P85037 733 aa8.66□□□□□ -1.02
PTP4A1P6-201ENST00000531034 PTCD2Q8WV60 388 aaKnown RBP8.66□□□□□ -1.02
PTP4A1P6-201ENST00000531034 KHSRPQ92945 711 aaKnown RBP eCLIP8.65□□□□□ -1.02
PTP4A1P6-201ENST00000531034 PPP4R3BQ5MIZ7 849 aa8.64□□□□□ -1.03
PTP4A1P6-201ENST00000531034 HS6ST3Q8IZP7 471 aa8.64□□□□□ -1.03
PTP4A1P6-201ENST00000531034 GPHNQ9NQX3 736 aaPredicted RBP8.63□□□□□ -1.03
PTP4A1P6-201ENST00000531034 ADGRD1Q6QNK2 874 aa8.62□□□□□ -1.03
PTP4A1P6-201ENST00000531034 STAC3Q96MF2 364 aa8.62□□□□□ -1.03
PTP4A1P6-201ENST00000531034 PLPP6Q8IY26 295 aa8.58□□□□□ -1.04
PTP4A1P6-201ENST00000531034 DNAJC5Q9H3Z4 198 aa8.58□□□□□ -1.04
PTP4A1P6-201ENST00000531034 PLA2G2EQ9NZK7 142 aa8.56□□□□□ -1.04
PTP4A1P6-201ENST00000531034 KDM4FA0A1W2PPD8 638 aa8.55□□□□□ -1.04
PTP4A1P6-201ENST00000531034 PPP1R37O75864 691 aa8.54□□□□□ -1.04
PTP4A1P6-201ENST00000531034 AXIN2Q9Y2T1 843 aa8.54□□□□□ -1.04
PTP4A1P6-201ENST00000531034 POTEEQ6S8J3 1075 aa8.52□□□□□ -1.05
PTP4A1P6-201ENST00000531034 HRO43593 1189 aa8.51□□□□□ -1.05
PTP4A1P6-201ENST00000531034 DSG2Q14126 1118 aa8.51□□□□□ -1.05
PTP4A1P6-201ENST00000531034 SLC4A5Q9BY07 1137 aa8.51□□□□□ -1.05
PTP4A1P6-201ENST00000531034 CHGAP10645 457 aaKnown RBP8.5□□□□□ -1.05
PTP4A1P6-201ENST00000531034 RGS20O76081 388 aa8.49□□□□□ -1.05
PTP4A1P6-201ENST00000531034 PDE4AP27815 886 aa8.48□□□□□ -1.05
PTP4A1P6-201ENST00000531034 OXER1Q8TDS5 423 aa8.48□□□□□ -1.05
PTP4A1P6-201ENST00000531034 BCL2L12Q9HB09 334 aa8.47□□□□□ -1.05
PTP4A1P6-201ENST00000531034 PTPREP23469 700 aa8.46□□□□□ -1.06
PTP4A1P6-201ENST00000531034 KCNK17Q96T54 332 aa8.46□□□□□ -1.06
PTP4A1P6-201ENST00000531034 PSEN2P49810 448 aa8.45□□□□□ -1.06
PTP4A1P6-201ENST00000531034 PPP1R15BQ5SWA1 713 aa8.45□□□□□ -1.06
PTP4A1P6-201ENST00000531034 IFFO2Q5TF58 517 aa8.45□□□□□ -1.06
PTP4A1P6-201ENST00000531034 CRISPLD2Q9H0B8 497 aa8.45□□□□□ -1.06
PTP4A1P6-201ENST00000531034 DMRTA1Q5VZB9 504 aa8.44□□□□□ -1.06
PTP4A1P6-201ENST00000531034 ZNF454Q8N9F8 522 aa8.44□□□□□ -1.06
PTP4A1P6-201ENST00000531034 NBPF3Q9H094 633 aa8.44□□□□□ -1.06
PTP4A1P6-201ENST00000531034 GOLGA8CPA6NN73 597 aa8.43□□□□□ -1.06
PTP4A1P6-201ENST00000531034 KCTD12Q96CX2 325 aaKnown RBP8.43□□□□□ -1.06
PTP4A1P6-201ENST00000531034 JPH4Q96JJ6 628 aa8.43□□□□□ -1.06
PTP4A1P6-201ENST00000531034 VPS9D1Q9Y2B5 631 aa8.43□□□□□ -1.06
PTP4A1P6-201ENST00000531034 FOSBP53539 338 aa8.4□□□□□ -1.06
PTP4A1P6-201ENST00000531034 BCANQ96GW7 911 aa8.4□□□□□ -1.06
PTP4A1P6-201ENST00000531034 ANO8Q9HCE9 1232 aaPredicted RBP8.4□□□□□ -1.06
PTP4A1P6-201ENST00000531034 PLCB2Q00722 1185 aa8.39□□□□□ -1.07
PTP4A1P6-201ENST00000531034 MRPL50Q8N5N7 158 aaKnown RBP8.39□□□□□ -1.07
PTP4A1P6-201ENST00000531034 UPF1Q92900 1129 aaKnown RBP eCLIP8.39□□□□□ -1.07
PTP4A1P6-201ENST00000531034 ZDHHC16Q969W1 377 aa8.39□□□□□ -1.07
PTP4A1P6-201ENST00000531034 DDX27Q96GQ7 796 aaKnown RBP8.38□□□□□ -1.07
PTP4A1P6-201ENST00000531034 MAP3K9P80192 1104 aa8.36□□□□□ -1.07
PTP4A1P6-201ENST00000531034 FBXW7Q969H0 707 aa8.36□□□□□ -1.07
PTP4A1P6-201ENST00000531034 BHMG1C9JSJ3 638 aaPredicted RBP8.35□□□□□ -1.07
PTP4A1P6-201ENST00000531034 EVI5O60447 810 aa8.35□□□□□ -1.07
PTP4A1P6-201ENST00000531034 THSD4Q6ZMP0 1018 aa8.35□□□□□ -1.07
PTP4A1P6-201ENST00000531034 NYAP1Q6ZVC0 841 aa8.35□□□□□ -1.07
PTP4A1P6-201ENST00000531034 ZBED2Q9BTP6 218 aa8.35□□□□□ -1.07
PTP4A1P6-201ENST00000531034 NKX1-1Q15270 411 aaPredicted RBP8.34□□□□□ -1.07
PTP4A1P6-201ENST00000531034 WNT2BQ93097 391 aa8.34□□□□□ -1.07
PTP4A1P6-201ENST00000531034 PPP1R3GB7ZBB8 358 aa8.33□□□□□ -1.08
PTP4A1P6-201ENST00000531034 MFSD10Q14728 455 aa8.33□□□□□ -1.08
PTP4A1P6-201ENST00000531034 PTPN5P54829 565 aa8.32□□□□□ -1.08
PTP4A1P6-201ENST00000531034 LAPTM4BQ86VI4 370 aa8.32□□□□□ -1.08
PTP4A1P6-201ENST00000531034 NCKAP5LQ9HCH0 1330 aa8.31□□□□□ -1.08
PTP4A1P6-201ENST00000531034 LARP6Q9BRS8 491 aaKnown RBP8.31□□□□□ -1.08
PTP4A1P6-201ENST00000531034 RABGEF1Q9UJ41 708 aa8.31□□□□□ -1.08
PTP4A1P6-201ENST00000531034 ONECUT3O60422 494 aaPredicted RBP8.3□□□□□ -1.08
PTP4A1P6-201ENST00000531034 ANKK1Q8NFD2 765 aa8.3□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms