RNA–Protein interactions for RNA: ENST00000530709.5

USP33-216, Transcript of ubiquitin specific peptidase 33, humanhuman

TSL 4

Gene USP33, Length 549 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP33-216ENST00000530709 DOK7Q18PE1 504 aa12.88□□□□□ -0.35
USP33-216ENST00000530709 PCDH10Q9P2E7 1040 aa12.88□□□□□ -0.35
USP33-216ENST00000530709 NKX1-1Q15270 411 aaPredicted RBP12.86□□□□□ -0.35
USP33-216ENST00000530709 C2orf72A6NCS6 295 aa12.84□□□□□ -0.35
USP33-216ENST00000530709 FAM205CA6NFA0 338 aa12.84□□□□□ -0.35
USP33-216ENST00000530709 RIMBP2O15034 1052 aa12.83□□□□□ -0.36
USP33-216ENST00000530709 TMC2Q8TDI7 906 aa12.81□□□□□ -0.36
USP33-216ENST00000530709 HOXB1P14653 301 aaPredicted RBP12.78□□□□□ -0.36
USP33-216ENST00000530709 KIF3CO14782 793 aa12.77□□□□□ -0.37
USP33-216ENST00000530709 HS3ST6Q96QI5 342 aa12.77□□□□□ -0.37
USP33-216ENST00000530709 DNAJC5Q9H3Z4 198 aa12.76□□□□□ -0.37
USP33-216ENST00000530709 POTEB3A0JP26 581 aa12.75□□□□□ -0.37
USP33-216ENST00000530709 ARSIQ5FYB1 569 aa12.75□□□□□ -0.37
USP33-216ENST00000530709 POTEBQ6S5H4 581 aa12.75□□□□□ -0.37
USP33-216ENST00000530709 ERBB3P21860 1342 aa12.74□□□□□ -0.37
USP33-216ENST00000530709 RYDENQ9NUL5 291 aaKnown RBP12.73□□□□□ -0.37
USP33-216ENST00000530709 GPR153Q6NV75 609 aa12.72□□□□□ -0.37
USP33-216ENST00000530709 KHSRPQ92945 711 aaKnown RBP eCLIP12.72□□□□□ -0.37
USP33-216ENST00000530709 RTN4Q9NQC3 1192 aaKnown RBP12.71□□□□□ -0.37
USP33-216ENST00000530709 AMER1Q5JTC6 1135 aaPredicted RBP12.7□□□□□ -0.38
USP33-216ENST00000530709 ZSWIM6Q9HCJ5 1215 aa12.7□□□□□ -0.38
USP33-216ENST00000530709 GTPBP6O43824 516 aaPredicted RBP12.69□□□□□ -0.38
USP33-216ENST00000530709 VARS2Q5ST30 1063 aaKnown RBP12.67□□□□□ -0.38
USP33-216ENST00000530709 GPHNQ9NQX3 736 aaPredicted RBP12.64□□□□□ -0.39
USP33-216ENST00000530709 PLPP6Q8IY26 295 aa12.63□□□□□ -0.39
USP33-216ENST00000530709 NUDT7P0C024 238 aa12.62□□□□□ -0.39
USP33-216ENST00000530709 DSG2Q14126 1118 aa12.62□□□□□ -0.39
USP33-216ENST00000530709 PCDHGA4Q9Y5G9 962 aa12.61□□□□□ -0.39
USP33-216ENST00000530709 FOXK1P85037 733 aa12.6□□□□□ -0.39
USP33-216ENST00000530709 KRTAP3-3Q9BYR6 98 aa12.58□□□□□ -0.4
USP33-216ENST00000530709 KRTAP3-2Q9BYR7 98 aa12.58□□□□□ -0.4
USP33-216ENST00000530709 SLC34A2O95436 690 aa12.57□□□□□ -0.4
USP33-216ENST00000530709 ZNF316A6NFI3 1004 aaPredicted RBP12.56□□□□□ -0.4
USP33-216ENST00000530709 SPNS2Q8IVW8 549 aa12.56□□□□□ -0.4
USP33-216ENST00000530709 PDE4AP27815 886 aa12.55□□□□□ -0.4
USP33-216ENST00000530709 BBXQ8WY36 941 aaPredicted RBP12.54□□□□□ -0.4
USP33-216ENST00000530709 CRISPLD2Q9H0B8 497 aa12.53□□□□□ -0.4
USP33-216ENST00000530709 LHX6Q9UPM6 363 aa12.53□□□□□ -0.4
USP33-216ENST00000530709 ZNF687Q8N1G0 1237 aa12.52□□□□□ -0.41
USP33-216ENST00000530709 LARP6Q9BRS8 491 aaKnown RBP12.52□□□□□ -0.41
USP33-216ENST00000530709 NCKAP5LQ9HCH0 1330 aa12.52□□□□□ -0.41
USP33-216ENST00000530709 PPP1R15BQ5SWA1 713 aa12.51□□□□□ -0.41
USP33-216ENST00000530709 UPF1Q92900 1129 aaKnown RBP eCLIP12.51□□□□□ -0.41
USP33-216ENST00000530709 PTCD2Q8WV60 388 aaKnown RBP12.5□□□□□ -0.41
USP33-216ENST00000530709 TBC1D12O60347 775 aa12.48□□□□□ -0.41
USP33-216ENST00000530709 MMRN1Q13201 1228 aa12.47□□□□□ -0.41
USP33-216ENST00000530709 CADPS2Q86UW7 1296 aa12.47□□□□□ -0.41
USP33-216ENST00000530709 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.46□□□□□ -0.41
USP33-216ENST00000530709 SPRYD3Q8NCJ5 442 aa12.44□□□□□ -0.42
USP33-216ENST00000530709 DDX27Q96GQ7 796 aaKnown RBP12.44□□□□□ -0.42
USP33-216ENST00000530709 CFAP44Q96MT7 982 aa12.44□□□□□ -0.42
USP33-216ENST00000530709 ANKRD13DQ6ZTN6 518 aa12.42□□□□□ -0.42
USP33-216ENST00000530709 AXIN2Q9Y2T1 843 aa12.42□□□□□ -0.42
USP33-216ENST00000530709 PAXIP1Q6ZW49 1069 aaPredicted RBP12.41□□□□□ -0.42
USP33-216ENST00000530709 OXER1Q8TDS5 423 aa12.4□□□□□ -0.42
USP33-216ENST00000530709 KDM4FA0A1W2PPD8 638 aa12.38□□□□□ -0.43
USP33-216ENST00000530709 MFSD10Q14728 455 aa12.35□□□□□ -0.43
USP33-216ENST00000530709 POTEEQ6S8J3 1075 aa12.35□□□□□ -0.43
USP33-216ENST00000530709 PSDA5PKW4 1024 aaPredicted RBP12.34□□□□□ -0.43
USP33-216ENST00000530709 MAP3K9P80192 1104 aa12.34□□□□□ -0.43
USP33-216ENST00000530709 LSM11P83369 360 aaKnown RBP eCLIP12.33□□□□□ -0.44
USP33-216ENST00000530709 PBX2P40425 430 aa12.31□□□□□ -0.44
USP33-216ENST00000530709 PPP4R3BQ5MIZ7 849 aa12.31□□□□□ -0.44
USP33-216ENST00000530709 EMILIN3Q9NT22 766 aa12.31□□□□□ -0.44
USP33-216ENST00000530709 EVI5O60447 810 aa12.3□□□□□ -0.44
USP33-216ENST00000530709 ZNF454Q8N9F8 522 aa12.3□□□□□ -0.44
USP33-216ENST00000530709 ARHGAP33O14559 1287 aa12.29□□□□□ -0.44
USP33-216ENST00000530709 PSEN2P49810 448 aa12.29□□□□□ -0.44
USP33-216ENST00000530709 MYT1LQ9UL68 1186 aa12.27□□□□□ -0.45
USP33-216ENST00000530709 RNF166Q96A37 237 aaPredicted RBP12.25□□□□□ -0.45
USP33-216ENST00000530709 DMRTA1Q5VZB9 504 aa12.24□□□□□ -0.45
USP33-216ENST00000530709 KCNK17Q96T54 332 aa12.23□□□□□ -0.45
USP33-216ENST00000530709 ANO8Q9HCE9 1232 aaPredicted RBP12.22□□□□□ -0.45
USP33-216ENST00000530709 DPYSL4O14531 572 aa12.2□□□□□ -0.46
USP33-216ENST00000530709 FOSBP53539 338 aa12.2□□□□□ -0.46
USP33-216ENST00000530709 KCNH8Q96L42 1107 aa12.2□□□□□ -0.46
USP33-216ENST00000530709 ADGRD1Q6QNK2 874 aa12.19□□□□□ -0.46
USP33-216ENST00000530709 WDR70Q9NW82 654 aa12.18□□□□□ -0.46
USP33-216ENST00000530709 PTGER2P43116 358 aa12.17□□□□□ -0.46
USP33-216ENST00000530709 CAMK2BQ13554 666 aa12.17□□□□□ -0.46
USP33-216ENST00000530709 JPH4Q96JJ6 628 aa12.16□□□□□ -0.46
USP33-216ENST00000530709 ZDHHC16Q969W1 377 aa12.15□□□□□ -0.46
USP33-216ENST00000530709 PTPREP23469 700 aa12.14□□□□□ -0.47
USP33-216ENST00000530709 STAC3Q96MF2 364 aa12.14□□□□□ -0.47
USP33-216ENST00000530709 ADAM33Q9BZ11 813 aa12.14□□□□□ -0.47
USP33-216ENST00000530709 BCL2L12Q9HB09 334 aa12.13□□□□□ -0.47
USP33-216ENST00000530709 PCDHGA10Q9Y5H3 936 aa12.12□□□□□ -0.47
USP33-216ENST00000530709 E2F4Q16254 413 aa12.11□□□□□ -0.47
USP33-216ENST00000530709 TSHZ2Q9NRE2 1034 aa12.11□□□□□ -0.47
USP33-216ENST00000530709 TK2O00142 265 aa12.1□□□□□ -0.47
USP33-216ENST00000530709 DDX12PQ92771 950 aa12.09□□□□□ -0.47
USP33-216ENST00000530709 HRO43593 1189 aa12.07□□□□□ -0.48
USP33-216ENST00000530709 VPS9D1Q9Y2B5 631 aa12.07□□□□□ -0.48
USP33-216ENST00000530709 PHF14O94880 888 aa12.06□□□□□ -0.48
USP33-216ENST00000530709 TYW1BQ6NUM6 668 aa12.06□□□□□ -0.48
USP33-216ENST00000530709 RBM33Q96EV2 1170 aaKnown RBP12.06□□□□□ -0.48
USP33-216ENST00000530709 FBXW7Q969H0 707 aa12.02□□□□□ -0.49
USP33-216ENST00000530709 KCTD12Q96CX2 325 aaKnown RBP12.02□□□□□ -0.49
USP33-216ENST00000530709 ZBED2Q9BTP6 218 aa12.02□□□□□ -0.49
USP33-216ENST00000530709 EPAS1Q99814 870 aa12.01□□□□□ -0.49
Retrieved 100 of 20,778 RNA–protein pairs in 19.9 ms