RNA–Protein interactions for RNA: ENST00000530520.5

ME3-209, Transcript of malic enzyme 3, humanhuman

TSL 5

Gene ME3, Length 1,573 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ME3-209ENST00000530520 CFDP1Q9UEE9 299 aaPredicted RBP38.02■■■■□ 3.68
ME3-209ENST00000530520 FGD6Q6ZV73 1430 aa38.02■■■■□ 3.68
ME3-209ENST00000530520 ARAP3Q8WWN8 1544 aa38.02■■■■□ 3.68
ME3-209ENST00000530520 MIA2Q96PC5 1412 aa38■■■■□ 3.67
ME3-209ENST00000530520 PTPN23Q9H3S7 1636 aa37.96■■■■□ 3.67
ME3-209ENST00000530520 ZNF777Q9ULD5 760 aaPredicted RBP37.93■■■■□ 3.66
ME3-209ENST00000530520 FANCAO15360 1455 aa37.93■■■■□ 3.66
ME3-209ENST00000530520 PPRC1Q5VV67 1664 aaKnown RBP37.93■■■■□ 3.66
ME3-209ENST00000530520 CFAP74Q9C0B2 1584 aa37.92■■■■□ 3.66
ME3-209ENST00000530520 EFCAB2Q5VUJ9 269 aa37.92■■■■□ 3.66
ME3-209ENST00000530520 RRBP1Q9P2E9 1410 aaKnown RBP37.91■■■■□ 3.66
ME3-209ENST00000530520 SAMD9LQ8IVG5 1584 aa37.88■■■■□ 3.66
ME3-209ENST00000530520 CAMSAP2Q08AD1 1489 aa37.88■■■■□ 3.65
ME3-209ENST00000530520 TEX14Q8IWB6 1497 aa37.87■■■■□ 3.65
ME3-209ENST00000530520 TCOF1Q13428 1488 aaKnown RBP37.85■■■■□ 3.65
ME3-209ENST00000530520 ZNF644Q9H582 1327 aaPredicted RBP37.84■■■■□ 3.65
ME3-209ENST00000530520 FAM50AQ14320 339 aaKnown RBP37.84■■■■□ 3.65
ME3-209ENST00000530520 NEO1Q92859 1461 aa37.82■■■■□ 3.65
ME3-209ENST00000530520 AKNAQ7Z591 1439 aa37.79■■■■□ 3.64
ME3-209ENST00000530520 PLEKHH2Q8IVE3 1493 aa37.79■■■■□ 3.64
ME3-209ENST00000530520 ABCC1P33527 1531 aa37.78■■■■□ 3.64
ME3-209ENST00000530520 SYCP2Q9BX26 1530 aa37.76■■■■□ 3.64
ME3-209ENST00000530520 ADGRL1O94910 1474 aa37.76■■■■□ 3.64
ME3-209ENST00000530520 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP37.74■■■■□ 3.63
ME3-209ENST00000530520 KIAA1107Q9UPP5 1409 aa37.71■■■■□ 3.63
ME3-209ENST00000530520 TRIM26Q12899 539 aaPredicted RBP37.68■■■■□ 3.62
ME3-209ENST00000530520 SCAPERQ9BY12 1400 aa37.68■■■■□ 3.62
ME3-209ENST00000530520 ARHGEF12Q9NZN5 1544 aa37.68■■■■□ 3.62
ME3-209ENST00000530520 HNRNPMP52272 730 aaKnown RBP eCLIP37.68■■■■□ 3.62
ME3-209ENST00000530520 DNMT1P26358 1616 aaKnown RBP37.66■■■■□ 3.62
ME3-209ENST00000530520 ARHGEF5Q12774 1597 aa37.66■■■■□ 3.62
ME3-209ENST00000530520 MBD5Q9P267 1494 aa37.65■■■■□ 3.62
ME3-209ENST00000530520 CCDC141Q6ZP82 1450 aa37.61■■■■□ 3.61
ME3-209ENST00000530520 ITGAEP38570 1179 aa37.6■■■■□ 3.61
ME3-209ENST00000530520 DAPK1P53355 1430 aa37.59■■■■□ 3.61
ME3-209ENST00000530520 CROCC2H7BZ55 1655 aa37.59■■■■□ 3.61
ME3-209ENST00000530520 DENND4BO75064 1496 aaPredicted RBP37.58■■■■□ 3.61
ME3-209ENST00000530520 TRAPPC8Q9Y2L5 1435 aa37.58■■■■□ 3.61
ME3-209ENST00000530520 ABCC5O15440 1437 aa37.56■■■■□ 3.6
ME3-209ENST00000530520 RSPH4AQ5TD94 716 aa37.56■■■■□ 3.6
ME3-209ENST00000530520 POGZQ7Z3K3 1410 aa37.56■■■■□ 3.6
ME3-209ENST00000530520 ZNF518AQ6AHZ1 1483 aa37.54■■■■□ 3.6
ME3-209ENST00000530520 RICTORQ6R327 1708 aa37.53■■■■□ 3.6
ME3-209ENST00000530520 AFAP1Q8N556 730 aa37.51■■■■□ 3.59
ME3-209ENST00000530520 RAPGEF3O95398 923 aa37.48■■■■□ 3.59
ME3-209ENST00000530520 TSPY4P0CV99 314 aa37.48■■■■□ 3.59
ME3-209ENST00000530520 TSPY10P0CW01 314 aa37.48■■■■□ 3.59
ME3-209ENST00000530520 SHANK2Q9UPX8 1470 aa37.48■■■■□ 3.59
ME3-209ENST00000530520 FRMPD1Q5SYB0 1578 aa37.48■■■■□ 3.59
ME3-209ENST00000530520 KDM6BO15054 1643 aa37.47■■■■□ 3.59
ME3-209ENST00000530520 PTPRKQ15262 1439 aa37.46■■■■□ 3.59
ME3-209ENST00000530520 KDM5CP41229 1560 aa37.46■■■■□ 3.59
ME3-209ENST00000530520 COL17A1Q9UMD9 1497 aaPredicted RBP37.46■■■■□ 3.59
ME3-209ENST00000530520 C9orf84Q5VXU9 1444 aa37.45■■■■□ 3.59
ME3-209ENST00000530520 ADGBQ8N7X0 1667 aa37.43■■■■□ 3.58
ME3-209ENST00000530520 MAST1Q9Y2H9 1570 aa37.43■■■■□ 3.58
ME3-209ENST00000530520 CHIC2Q9UKJ5 165 aa37.42■■■■□ 3.58
ME3-209ENST00000530520 SPAG9O60271 1321 aaKnown RBP37.41■■■■□ 3.58
ME3-209ENST00000530520 HECW2Q9P2P5 1572 aa37.39■■■■□ 3.58
ME3-209ENST00000530520 INO80Q9ULG1 1556 aaPredicted RBP37.39■■■■□ 3.58
ME3-209ENST00000530520 MYT1LQ9UL68 1186 aa37.38■■■■□ 3.57
ME3-209ENST00000530520 ZFYVE16Q7Z3T8 1539 aa37.37■■■■□ 3.57
ME3-209ENST00000530520 PCGF6Q9BYE7 350 aa37.37■■■■□ 3.57
ME3-209ENST00000530520 ATP7AQ04656 1500 aa37.37■■■■□ 3.57
ME3-209ENST00000530520 ZMYM4Q5VZL5 1548 aa37.37■■■■□ 3.57
ME3-209ENST00000530520 KIDINS220Q9ULH0 1771 aa37.34■■■■□ 3.57
ME3-209ENST00000530520 ADGRL2O95490 1459 aa37.33■■■■□ 3.57
ME3-209ENST00000530520 RTEL1-TNFRSF6BF6WH68 1400 aa37.33■■■■□ 3.57
ME3-209ENST00000530520 MLH3Q9UHC1 1453 aa37.33■■■■□ 3.57
ME3-209ENST00000530520 ANKRD30AQ9BXX3 1397 aa37.31■■■■□ 3.56
ME3-209ENST00000530520 PLXNC1O60486 1568 aa37.3■■■■□ 3.56
ME3-209ENST00000530520 ROCK1Q13464 1354 aa37.3■■■■□ 3.56
ME3-209ENST00000530520 NCOA1Q15788 1441 aa37.27■■■■□ 3.56
ME3-209ENST00000530520 RRP7BPQ9NSQ0 103 aa37.25■■■■□ 3.55
ME3-209ENST00000530520 MAGI2Q86UL8 1455 aa37.25■■■■□ 3.55
ME3-209ENST00000530520 ABCA6Q8N139 1617 aa37.23■■■■□ 3.55
ME3-209ENST00000530520 KIF15Q9NS87 1388 aa37.22■■■■□ 3.55
ME3-209ENST00000530520 GCC2Q8IWJ2 1684 aa37.21■■■■□ 3.55
ME3-209ENST00000530520 YEATS2Q9ULM3 1422 aa37.19■■■■□ 3.54
ME3-209ENST00000530520 HFM1A2PYH4 1435 aa37.19■■■■□ 3.54
ME3-209ENST00000530520 DIP2CQ9Y2E4 1556 aa37.18■■■■□ 3.54
ME3-209ENST00000530520 ARHGEF40Q8TER5 1519 aa37.16■■■■□ 3.54
ME3-209ENST00000530520 NAIPQ13075 1403 aa37.15■■■■□ 3.54
ME3-209ENST00000530520 DUOX2Q9NRD8 1548 aa37.14■■■■□ 3.54
ME3-209ENST00000530520 A2MP01023 1474 aa37.09■■■■□ 3.53
ME3-209ENST00000530520 SETD5Q9C0A6 1442 aa37.08■■■■□ 3.53
ME3-209ENST00000530520 ANKRD50Q9ULJ7 1429 aa37.07■■■■□ 3.52
ME3-209ENST00000530520 ATP10AO60312 1499 aa37.07■■■■□ 3.52
ME3-209ENST00000530520 DHX29Q7Z478 1369 aaKnown RBP37.04■■■■□ 3.52
ME3-209ENST00000530520 ERBINQ96RT1 1412 aa37.03■■■■□ 3.52
ME3-209ENST00000530520 REREQ9P2R6 1566 aa37■■■■□ 3.51
ME3-209ENST00000530520 RAB3GAP2Q9H2M9 1393 aa36.99■■■■□ 3.51
ME3-209ENST00000530520 EIF2AK4Q9P2K8 1649 aaKnown RBP36.98■■■■□ 3.51
ME3-209ENST00000530520 SIGLEC1Q9BZZ2 1709 aa36.91■■■■□ 3.5
ME3-209ENST00000530520 BCORL1Q5H9F3 1711 aa36.89■■■■□ 3.5
ME3-209ENST00000530520 KIF3BO15066 747 aa36.88■■■■□ 3.49
ME3-209ENST00000530520 AGLP35573 1532 aa36.87■■■■□ 3.49
ME3-209ENST00000530520 UNC13BO14795 1591 aa36.83■■■■□ 3.49
ME3-209ENST00000530520 RNF17Q9BXT8 1623 aaKnown RBP36.83■■■■□ 3.49
ME3-209ENST00000530520 DEPDC5O75140 1603 aa36.82■■■■□ 3.48
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms