RNA–Protein interactions for RNA: ENST00000530516.1

NUP98-218, Transcript of nucleoporin 98, humanhuman

TSL 2

Gene NUP98, Length 391 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP98-218ENST00000530516 MMRN1Q13201 1228 aa9.28□□□□□ -0.92
NUP98-218ENST00000530516 PKD2Q13563 968 aa9.28□□□□□ -0.92
NUP98-218ENST00000530516 ERBB3P21860 1342 aa9.28□□□□□ -0.92
NUP98-218ENST00000530516 TMEM92Q6UXU6 159 aa9.27□□□□□ -0.93
NUP98-218ENST00000530516 MFRPQ9BY79 579 aa9.26□□□□□ -0.93
NUP98-218ENST00000530516 KRTAP3-3Q9BYR6 98 aa9.25□□□□□ -0.93
NUP98-218ENST00000530516 KRTAP3-2Q9BYR7 98 aa9.25□□□□□ -0.93
NUP98-218ENST00000530516 POTEB3A0JP26 581 aa9.23□□□□□ -0.93
NUP98-218ENST00000530516 RGL2O15211 777 aa9.23□□□□□ -0.93
NUP98-218ENST00000530516 POTEBQ6S5H4 581 aa9.23□□□□□ -0.93
NUP98-218ENST00000530516 GPR153Q6NV75 609 aa9.21□□□□□ -0.94
NUP98-218ENST00000530516 VARS2Q5ST30 1063 aaKnown RBP9.19□□□□□ -0.94
NUP98-218ENST00000530516 KIF3CO14782 793 aa9.18□□□□□ -0.94
NUP98-218ENST00000530516 ZNF687Q8N1G0 1237 aa9.18□□□□□ -0.94
NUP98-218ENST00000530516 TMC2Q8TDI7 906 aa9.17□□□□□ -0.94
NUP98-218ENST00000530516 SLC34A2O95436 690 aa9.15□□□□□ -0.94
NUP98-218ENST00000530516 PTGER2P43116 358 aa9.15□□□□□ -0.94
NUP98-218ENST00000530516 C2orf72A6NCS6 295 aa9.14□□□□□ -0.95
NUP98-218ENST00000530516 HS6ST3Q8IZP7 471 aa9.14□□□□□ -0.95
NUP98-218ENST00000530516 ARSIQ5FYB1 569 aa9.13□□□□□ -0.95
NUP98-218ENST00000530516 ZNF316A6NFI3 1004 aaPredicted RBP9.12□□□□□ -0.95
NUP98-218ENST00000530516 RYDENQ9NUL5 291 aaKnown RBP9.12□□□□□ -0.95
NUP98-218ENST00000530516 PBX2P40425 430 aa9.09□□□□□ -0.95
NUP98-218ENST00000530516 DNAJC5Q9H3Z4 198 aa9.08□□□□□ -0.96
NUP98-218ENST00000530516 PSDA5PKW4 1024 aaPredicted RBP9.07□□□□□ -0.96
NUP98-218ENST00000530516 RNF166Q96A37 237 aaPredicted RBP9.06□□□□□ -0.96
NUP98-218ENST00000530516 PCDHGA4Q9Y5G9 962 aa9.06□□□□□ -0.96
NUP98-218ENST00000530516 MYT1LQ9UL68 1186 aa9.05□□□□□ -0.96
NUP98-218ENST00000530516 PPP1R37O75864 691 aa9.03□□□□□ -0.96
NUP98-218ENST00000530516 NUDT7P0C024 238 aa9.03□□□□□ -0.96
NUP98-218ENST00000530516 CHGAP10645 457 aaKnown RBP9.03□□□□□ -0.96
NUP98-218ENST00000530516 FOXK1P85037 733 aa9.03□□□□□ -0.96
NUP98-218ENST00000530516 KHSRPQ92945 711 aaKnown RBP eCLIP9.02□□□□□ -0.97
NUP98-218ENST00000530516 GPHNQ9NQX3 736 aaPredicted RBP9.02□□□□□ -0.97
NUP98-218ENST00000530516 LSM11P83369 360 aaKnown RBP eCLIP9.01□□□□□ -0.97
NUP98-218ENST00000530516 PTCD2Q8WV60 388 aaKnown RBP9.01□□□□□ -0.97
NUP98-218ENST00000530516 TBC1D12O60347 775 aa9□□□□□ -0.97
NUP98-218ENST00000530516 LHX6Q9UPM6 363 aa9□□□□□ -0.97
NUP98-218ENST00000530516 ANKRD13DQ6ZTN6 518 aa8.98□□□□□ -0.97
NUP98-218ENST00000530516 PLPP6Q8IY26 295 aa8.97□□□□□ -0.97
NUP98-218ENST00000530516 ARHGAP33O14559 1287 aa8.94□□□□□ -0.98
NUP98-218ENST00000530516 KDM4FA0A1W2PPD8 638 aa8.93□□□□□ -0.98
NUP98-218ENST00000530516 DSG2Q14126 1118 aa8.92□□□□□ -0.98
NUP98-218ENST00000530516 PPP4R3BQ5MIZ7 849 aa8.92□□□□□ -0.98
NUP98-218ENST00000530516 TK2O00142 265 aa8.91□□□□□ -0.98
NUP98-218ENST00000530516 NKX1-1Q15270 411 aaPredicted RBP8.91□□□□□ -0.98
NUP98-218ENST00000530516 KCNH8Q96L42 1107 aa8.91□□□□□ -0.98
NUP98-218ENST00000530516 RTN4Q9NQC3 1192 aaKnown RBP8.9□□□□□ -0.98
NUP98-218ENST00000530516 PDE4AP27815 886 aa8.89□□□□□ -0.99
NUP98-218ENST00000530516 CRISPLD2Q9H0B8 497 aa8.89□□□□□ -0.99
NUP98-218ENST00000530516 POTEEQ6S8J3 1075 aa8.87□□□□□ -0.99
NUP98-218ENST00000530516 OXER1Q8TDS5 423 aa8.87□□□□□ -0.99
NUP98-218ENST00000530516 AMER1Q5JTC6 1135 aaPredicted RBP8.86□□□□□ -0.99
NUP98-218ENST00000530516 ADGRD1Q6QNK2 874 aa8.86□□□□□ -0.99
NUP98-218ENST00000530516 AXIN2Q9Y2T1 843 aa8.86□□□□□ -0.99
NUP98-218ENST00000530516 PPP1R15BQ5SWA1 713 aa8.85□□□□□ -0.99
NUP98-218ENST00000530516 HCSTQ9UBK5 93 aa8.84□□□□□ -0.99
NUP98-218ENST00000530516 GTPBP6O43824 516 aaPredicted RBP8.81□□□□□ -1
NUP98-218ENST00000530516 STAC3Q96MF2 364 aa8.8□□□□□ -1
NUP98-218ENST00000530516 HRO43593 1189 aa8.79□□□□□ -1
NUP98-218ENST00000530516 UPF1Q92900 1129 aaKnown RBP eCLIP8.79□□□□□ -1
NUP98-218ENST00000530516 DDX27Q96GQ7 796 aaKnown RBP8.79□□□□□ -1
NUP98-218ENST00000530516 SLC4A5Q9BY07 1137 aa8.79□□□□□ -1
NUP98-218ENST00000530516 NCKAP5LQ9HCH0 1330 aa8.79□□□□□ -1
NUP98-218ENST00000530516 PSEN2P49810 448 aa8.78□□□□□ -1
NUP98-218ENST00000530516 ZNF454Q8N9F8 522 aa8.78□□□□□ -1
NUP98-218ENST00000530516 BCL2L12Q9HB09 334 aa8.78□□□□□ -1
NUP98-218ENST00000530516 DCAF8L2P0C7V8 631 aa8.77□□□□□ -1.01
NUP98-218ENST00000530516 MFSD10Q14728 455 aa8.77□□□□□ -1.01
NUP98-218ENST00000530516 DMRTA1Q5VZB9 504 aa8.77□□□□□ -1.01
NUP98-218ENST00000530516 JPH4Q96JJ6 628 aa8.77□□□□□ -1.01
NUP98-218ENST00000530516 KCNK17Q96T54 332 aa8.77□□□□□ -1.01
NUP98-218ENST00000530516 LARP6Q9BRS8 491 aaKnown RBP8.76□□□□□ -1.01
NUP98-218ENST00000530516 ANO8Q9HCE9 1232 aaPredicted RBP8.76□□□□□ -1.01
NUP98-218ENST00000530516 PTPREP23469 700 aa8.75□□□□□ -1.01
NUP98-218ENST00000530516 FOSBP53539 338 aa8.75□□□□□ -1.01
NUP98-218ENST00000530516 EVI5O60447 810 aa8.73□□□□□ -1.01
NUP98-218ENST00000530516 MAP3K9P80192 1104 aa8.72□□□□□ -1.01
NUP98-218ENST00000530516 VPS9D1Q9Y2B5 631 aa8.72□□□□□ -1.01
NUP98-218ENST00000530516 ZDHHC16Q969W1 377 aa8.71□□□□□ -1.02
NUP98-218ENST00000530516 PLA2G2EQ9NZK7 142 aa8.7□□□□□ -1.02
NUP98-218ENST00000530516 KCTD12Q96CX2 325 aaKnown RBP8.68□□□□□ -1.02
NUP98-218ENST00000530516 NBPF3Q9H094 633 aa8.68□□□□□ -1.02
NUP98-218ENST00000530516 FBXW7Q969H0 707 aa8.67□□□□□ -1.02
NUP98-218ENST00000530516 ZBED2Q9BTP6 218 aa8.67□□□□□ -1.02
NUP98-218ENST00000530516 GOLGA8CPA6NN73 597 aa8.65□□□□□ -1.02
NUP98-218ENST00000530516 BHMG1C9JSJ3 638 aaPredicted RBP8.65□□□□□ -1.02
NUP98-218ENST00000530516 BBXQ8WY36 941 aaPredicted RBP8.65□□□□□ -1.02
NUP98-218ENST00000530516 PPP1R3GB7ZBB8 358 aa8.64□□□□□ -1.03
NUP98-218ENST00000530516 PHF14O94880 888 aa8.64□□□□□ -1.03
NUP98-218ENST00000530516 MRPL50Q8N5N7 158 aaKnown RBP8.64□□□□□ -1.03
NUP98-218ENST00000530516 ADAM33Q9BZ11 813 aa8.64□□□□□ -1.03
NUP98-218ENST00000530516 EMILIN3Q9NT22 766 aa8.64□□□□□ -1.03
NUP98-218ENST00000530516 CAMK2BQ13554 666 aa8.63□□□□□ -1.03
NUP98-218ENST00000530516 TYW1BQ6NUM6 668 aa8.63□□□□□ -1.03
NUP98-218ENST00000530516 EPAS1Q99814 870 aa8.62□□□□□ -1.03
NUP98-218ENST00000530516 PCDHGA10Q9Y5H3 936 aa8.61□□□□□ -1.03
NUP98-218ENST00000530516 ONECUT3O60422 494 aaPredicted RBP8.6□□□□□ -1.03
NUP98-218ENST00000530516 IFFO2Q5TF58 517 aa8.6□□□□□ -1.03
NUP98-218ENST00000530516 THSD4Q6ZMP0 1018 aa8.6□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 39.8 ms