RNA–Protein interactions for RNA: ENST00000530422.1

SCARNA9-201, small Cajal body-specific RNA 9, humanhuman

BASIC

Gene SCARNA9, Length 353 nt, Biotype antisense RNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARNA9-201ENST00000530422 MKRN3Q13064 507 aaKnown RBP12.76□□□□□ -0.37
SCARNA9-201ENST00000530422 LMOD2Q6P5Q4 547 aa12.76□□□□□ -0.37
SCARNA9-201ENST00000530422 SLAIN1Q8ND83 568 aa12.76□□□□□ -0.37
SCARNA9-201ENST00000530422 ZMYND15Q9H091 742 aa12.76□□□□□ -0.37
SCARNA9-201ENST00000530422 RSPH6AQ9H0K4 717 aa12.75□□□□□ -0.37
SCARNA9-201ENST00000530422 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.74□□□□□ -0.37
SCARNA9-201ENST00000530422 NEUROD2Q15784 382 aa12.73□□□□□ -0.37
SCARNA9-201ENST00000530422 CABP2Q9NPB3 220 aa12.73□□□□□ -0.37
SCARNA9-201ENST00000530422 BCLAF1Q9NYF8 920 aaKnown RBP eCLIP12.72□□□□□ -0.37
SCARNA9-201ENST00000530422 P3H3Q8IVL6 736 aa12.69□□□□□ -0.38
SCARNA9-201ENST00000530422 RNF25Q96BH1 459 aaPredicted RBP12.69□□□□□ -0.38
SCARNA9-201ENST00000530422 ZBTB7CA1YPR0 619 aa12.67□□□□□ -0.38
SCARNA9-201ENST00000530422 DPY19L2Q6NUT2 758 aa12.67□□□□□ -0.38
SCARNA9-201ENST00000530422 TRIM41Q8WV44 630 aa12.67□□□□□ -0.38
SCARNA9-201ENST00000530422 ILDR1Q86SU0 546 aaPredicted RBP12.66□□□□□ -0.38
SCARNA9-201ENST00000530422 PLSCR2Q9NRY7 297 aa12.65□□□□□ -0.38
SCARNA9-201ENST00000530422 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.64□□□□□ -0.39
SCARNA9-201ENST00000530422 GTPBP6O43824 516 aaPredicted RBP12.62□□□□□ -0.39
SCARNA9-201ENST00000530422 ST18O60284 1047 aa12.6□□□□□ -0.39
SCARNA9-201ENST00000530422 EFCAB3Q8N7B9 438 aa12.6□□□□□ -0.39
SCARNA9-201ENST00000530422 ARID3AQ99856 593 aa12.6□□□□□ -0.39
SCARNA9-201ENST00000530422 RIOK3O14730 519 aaKnown RBP12.59□□□□□ -0.39
SCARNA9-201ENST00000530422 NKX1-1Q15270 411 aaPredicted RBP12.59□□□□□ -0.39
SCARNA9-201ENST00000530422 L3MBTL3Q96JM7 780 aaPredicted RBP12.59□□□□□ -0.39
SCARNA9-201ENST00000530422 C3orf67Q6ZVT6 689 aa12.58□□□□□ -0.4
SCARNA9-201ENST00000530422 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP12.56□□□□□ -0.4
SCARNA9-201ENST00000530422 PDIA4P13667 645 aaKnown RBP12.56□□□□□ -0.4
SCARNA9-201ENST00000530422 ZFP91Q96JP5 570 aaPredicted RBP12.56□□□□□ -0.4
SCARNA9-201ENST00000530422 LOC105371045A0A1W2PR82 267 aa12.54□□□□□ -0.4
SCARNA9-201ENST00000530422 ZC3H15Q8WU90 426 aaKnown RBP12.52□□□□□ -0.41
SCARNA9-201ENST00000530422 C1orf115Q9H7X2 142 aa12.52□□□□□ -0.41
SCARNA9-201ENST00000530422 VGFO15240 615 aaPredicted RBP12.51□□□□□ -0.41
SCARNA9-201ENST00000530422 SLC24A3Q9HC58 644 aa12.51□□□□□ -0.41
SCARNA9-201ENST00000530422 BOLA1Q9Y3E2 137 aa12.51□□□□□ -0.41
SCARNA9-201ENST00000530422 PCDH10Q9P2E7 1040 aa12.49□□□□□ -0.41
SCARNA9-201ENST00000530422 SNPHO15079 494 aa12.45□□□□□ -0.42
SCARNA9-201ENST00000530422 NECTIN2Q92692 538 aa12.45□□□□□ -0.42
SCARNA9-201ENST00000530422 MS4A4AQ96JQ5 239 aa12.45□□□□□ -0.42
SCARNA9-201ENST00000530422 G3V3G9 751 aa12.44□□□□□ -0.42
SCARNA9-201ENST00000530422 CDAN1Q8IWY9 1227 aa12.44□□□□□ -0.42
SCARNA9-201ENST00000530422 KCNV2Q8TDN2 545 aa12.44□□□□□ -0.42
SCARNA9-201ENST00000530422 MARVELD3Q96A59 401 aa12.44□□□□□ -0.42
SCARNA9-201ENST00000530422 PHF8Q9UPP1 1060 aa12.44□□□□□ -0.42
SCARNA9-201ENST00000530422 SHROOM4Q9ULL8 1493 aa12.43□□□□□ -0.42
SCARNA9-201ENST00000530422 TMEM121BQ9BXQ6 578 aaPredicted RBP12.43□□□□□ -0.42
SCARNA9-201ENST00000530422 SOX12O15370 315 aa12.41□□□□□ -0.42
SCARNA9-201ENST00000530422 BCL11BQ9C0K0 894 aaPredicted RBP12.41□□□□□ -0.42
SCARNA9-201ENST00000530422 MICALL2Q8IY33 904 aa12.38□□□□□ -0.43
SCARNA9-201ENST00000530422 STK24Q9Y6E0 443 aa12.37□□□□□ -0.43
SCARNA9-201ENST00000530422 TMEM92Q6UXU6 159 aa12.36□□□□□ -0.43
SCARNA9-201ENST00000530422 STK25O00506 426 aa12.34□□□□□ -0.43
SCARNA9-201ENST00000530422 HOXB3P14651 431 aaPredicted RBP12.34□□□□□ -0.43
SCARNA9-201ENST00000530422 RYDENQ9NUL5 291 aaKnown RBP12.34□□□□□ -0.43
SCARNA9-201ENST00000530422 CDK11AQ9UQ88 783 aaPredicted RBP12.34□□□□□ -0.43
SCARNA9-201ENST00000530422 APBB1O00213 710 aa12.33□□□□□ -0.44
SCARNA9-201ENST00000530422 HMGB1P09429 215 aaKnown RBP12.33□□□□□ -0.44
SCARNA9-201ENST00000530422 ARID3CA6NKF2 412 aa12.32□□□□□ -0.44
SCARNA9-201ENST00000530422 FBXO22Q8NEZ5 403 aa12.32□□□□□ -0.44
SCARNA9-201ENST00000530422 BCL11AQ9H165 835 aa12.32□□□□□ -0.44
SCARNA9-201ENST00000530422 WDR70Q9NW82 654 aa12.32□□□□□ -0.44
SCARNA9-201ENST00000530422 MFRPQ9BY79 579 aa12.31□□□□□ -0.44
SCARNA9-201ENST00000530422 IGSF3O75054 1194 aa12.3□□□□□ -0.44
SCARNA9-201ENST00000530422 EMP3P54852 163 aa12.3□□□□□ -0.44
SCARNA9-201ENST00000530422 KCTD17Q8N5Z5 321 aa12.3□□□□□ -0.44
SCARNA9-201ENST00000530422 ZMYND10O75800 440 aa12.29□□□□□ -0.44
SCARNA9-201ENST00000530422 POTEB3A0JP26 581 aa12.28□□□□□ -0.44
SCARNA9-201ENST00000530422 NLRP6P59044 892 aa12.28□□□□□ -0.44
SCARNA9-201ENST00000530422 POTEBQ6S5H4 581 aa12.28□□□□□ -0.44
SCARNA9-201ENST00000530422 FAM205CA6NFA0 338 aa12.25□□□□□ -0.45
SCARNA9-201ENST00000530422 CDK11BP21127 795 aaKnown RBP12.24□□□□□ -0.45
SCARNA9-201ENST00000530422 HS3ST6Q96QI5 342 aa12.24□□□□□ -0.45
SCARNA9-201ENST00000530422 RAD21O60216 631 aa12.23□□□□□ -0.45
SCARNA9-201ENST00000530422 IL27Q8NEV9 243 aa12.22□□□□□ -0.45
SCARNA9-201ENST00000530422 ZNF710Q8N1W2 664 aa12.21□□□□□ -0.45
SCARNA9-201ENST00000530422 RGS22Q8NE09 1264 aa12.21□□□□□ -0.45
SCARNA9-201ENST00000530422 HOXB1P14653 301 aaPredicted RBP12.2□□□□□ -0.46
SCARNA9-201ENST00000530422 DOK7Q18PE1 504 aa12.2□□□□□ -0.46
SCARNA9-201ENST00000530422 TRAIPQ9BWF2 469 aa12.2□□□□□ -0.46
SCARNA9-201ENST00000530422 ARHGEF1Q92888 912 aaKnown RBP12.19□□□□□ -0.46
SCARNA9-201ENST00000530422 GPBP1L1Q9HC44 474 aaPredicted RBP12.19□□□□□ -0.46
SCARNA9-201ENST00000530422 TESPA1A2RU30 521 aaPredicted RBP12.18□□□□□ -0.46
SCARNA9-201ENST00000530422 UBE2Q2Q8WVN8 375 aa12.17□□□□□ -0.46
SCARNA9-201ENST00000530422 HSP90B1P14625 803 aaKnown RBP12.16□□□□□ -0.46
SCARNA9-201ENST00000530422 BARGINQ6ZT62 677 aa12.16□□□□□ -0.46
SCARNA9-201ENST00000530422 KRTAP3-3Q9BYR6 98 aa12.16□□□□□ -0.46
SCARNA9-201ENST00000530422 KRTAP3-2Q9BYR7 98 aa12.16□□□□□ -0.46
SCARNA9-201ENST00000530422 CCDC82Q8N4S0 544 aa12.15□□□□□ -0.46
SCARNA9-201ENST00000530422 SPNS2Q8IVW8 549 aa12.14□□□□□ -0.47
SCARNA9-201ENST00000530422 PPP1R37O75864 691 aa12.13□□□□□ -0.47
SCARNA9-201ENST00000530422 AK7Q96M32 723 aa12.13□□□□□ -0.47
SCARNA9-201ENST00000530422 FLIIQ13045 1269 aa12.12□□□□□ -0.47
SCARNA9-201ENST00000530422 CADPS2Q86UW7 1296 aa12.12□□□□□ -0.47
SCARNA9-201ENST00000530422 KDM4CQ9H3R0 1056 aa12.12□□□□□ -0.47
SCARNA9-201ENST00000530422 RIMBP2O15034 1052 aa12.11□□□□□ -0.47
SCARNA9-201ENST00000530422 GPR153Q6NV75 609 aa12.1□□□□□ -0.47
SCARNA9-201ENST00000530422 ERBB3P21860 1342 aa12.1□□□□□ -0.47
SCARNA9-201ENST00000530422 C2orf72A6NCS6 295 aa12.09□□□□□ -0.47
SCARNA9-201ENST00000530422 KIF3CO14782 793 aa12.09□□□□□ -0.47
SCARNA9-201ENST00000530422 SEMA3EO15041 775 aa12.09□□□□□ -0.47
SCARNA9-201ENST00000530422 BRD2P25440 801 aaKnown RBP12.09□□□□□ -0.47
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms