RNA–Protein interactions for RNA: ENST00000530075.1

GMDS-206, Transcript of GDP-mannose 4,6-dehydratase, humanhuman

TSL 2

Gene GMDS, Length 402 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GMDS-206ENST00000530075 TMEM92Q6UXU6 159 aa12.83□□□□□ -0.36
GMDS-206ENST00000530075 LARP6Q9BRS8 491 aaKnown RBP12.83□□□□□ -0.36
GMDS-206ENST00000530075 PDE4AP27815 886 aa12.81□□□□□ -0.36
GMDS-206ENST00000530075 GPHNQ9NQX3 736 aaPredicted RBP12.79□□□□□ -0.36
GMDS-206ENST00000530075 C2orf72A6NCS6 295 aa12.77□□□□□ -0.37
GMDS-206ENST00000530075 KIF3CO14782 793 aa12.77□□□□□ -0.37
GMDS-206ENST00000530075 MFSD10Q14728 455 aa12.77□□□□□ -0.37
GMDS-206ENST00000530075 WDR70Q9NW82 654 aa12.77□□□□□ -0.37
GMDS-206ENST00000530075 C3orf67Q6ZVT6 689 aa12.75□□□□□ -0.37
GMDS-206ENST00000530075 DSG2Q14126 1118 aa12.74□□□□□ -0.37
GMDS-206ENST00000530075 TMC2Q8TDI7 906 aa12.74□□□□□ -0.37
GMDS-206ENST00000530075 DDX27Q96GQ7 796 aaKnown RBP12.74□□□□□ -0.37
GMDS-206ENST00000530075 PPP1R15BQ5SWA1 713 aa12.71□□□□□ -0.37
GMDS-206ENST00000530075 FOXK1P85037 733 aa12.7□□□□□ -0.38
GMDS-206ENST00000530075 EIF2AK3Q9NZJ5 1116 aaKnown RBP12.7□□□□□ -0.38
GMDS-206ENST00000530075 KCNV2Q8TDN2 545 aa12.69□□□□□ -0.38
GMDS-206ENST00000530075 E2F4Q16254 413 aa12.67□□□□□ -0.38
GMDS-206ENST00000530075 PLPP6Q8IY26 295 aa12.67□□□□□ -0.38
GMDS-206ENST00000530075 CAMK2BQ13554 666 aa12.64□□□□□ -0.39
GMDS-206ENST00000530075 LHX8Q68G74 356 aa12.62□□□□□ -0.39
GMDS-206ENST00000530075 OTUD5Q96G74 571 aa12.61□□□□□ -0.39
GMDS-206ENST00000530075 SCUBE2Q9NQ36 999 aa12.61□□□□□ -0.39
GMDS-206ENST00000530075 EMILIN3Q9NT22 766 aa12.61□□□□□ -0.39
GMDS-206ENST00000530075 SLAIN1Q8ND83 568 aa12.6□□□□□ -0.39
GMDS-206ENST00000530075 MAMSTRQ6ZN01 415 aa12.59□□□□□ -0.39
GMDS-206ENST00000530075 P3H3Q8IVL6 736 aa12.59□□□□□ -0.39
GMDS-206ENST00000530075 ARHGEF1Q92888 912 aaKnown RBP12.54□□□□□ -0.4
GMDS-206ENST00000530075 BCANQ96GW7 911 aa12.53□□□□□ -0.4
GMDS-206ENST00000530075 UPF1Q92900 1129 aaKnown RBP eCLIP12.52□□□□□ -0.41
GMDS-206ENST00000530075 ARIH1Q9Y4X5 557 aaPredicted RBP12.52□□□□□ -0.41
GMDS-206ENST00000530075 DPYSL4O14531 572 aa12.51□□□□□ -0.41
GMDS-206ENST00000530075 OXER1Q8TDS5 423 aa12.5□□□□□ -0.41
GMDS-206ENST00000530075 HOXB3P14651 431 aaPredicted RBP12.48□□□□□ -0.41
GMDS-206ENST00000530075 NBR1Q14596 966 aa12.48□□□□□ -0.41
GMDS-206ENST00000530075 SLC34A2O95436 690 aa12.46□□□□□ -0.41
GMDS-206ENST00000530075 SEMA3EO15041 775 aa12.45□□□□□ -0.42
GMDS-206ENST00000530075 PTCD2Q8WV60 388 aaKnown RBP12.45□□□□□ -0.42
GMDS-206ENST00000530075 MAP3K9P80192 1104 aa12.44□□□□□ -0.42
GMDS-206ENST00000530075 PCDHGA4Q9Y5G9 962 aa12.41□□□□□ -0.42
GMDS-206ENST00000530075 PDIA6Q15084 440 aa12.4□□□□□ -0.42
GMDS-206ENST00000530075 KHSRPQ92945 711 aaKnown RBP eCLIP12.39□□□□□ -0.43
GMDS-206ENST00000530075 DOK7Q18PE1 504 aa12.38□□□□□ -0.43
GMDS-206ENST00000530075 TESPA1A2RU30 521 aaPredicted RBP12.36□□□□□ -0.43
GMDS-206ENST00000530075 SPDYE16A6NNV3 312 aaPredicted RBP12.36□□□□□ -0.43
GMDS-206ENST00000530075 TBC1D12O60347 775 aa12.36□□□□□ -0.43
GMDS-206ENST00000530075 EVI5O60447 810 aa12.36□□□□□ -0.43
GMDS-206ENST00000530075 MLLT3P42568 568 aaPredicted RBP12.36□□□□□ -0.43
GMDS-206ENST00000530075 ARSIQ5FYB1 569 aa12.36□□□□□ -0.43
GMDS-206ENST00000530075 GPR153Q6NV75 609 aa12.36□□□□□ -0.43
GMDS-206ENST00000530075 KDM4FA0A1W2PPD8 638 aa12.35□□□□□ -0.43
GMDS-206ENST00000530075 SNPHO15079 494 aa12.32□□□□□ -0.44
GMDS-206ENST00000530075 ZNF710Q8N1W2 664 aa12.32□□□□□ -0.44
GMDS-206ENST00000530075 ANO8Q9HCE9 1232 aaPredicted RBP12.32□□□□□ -0.44
GMDS-206ENST00000530075 RIMBP2O15034 1052 aa12.3□□□□□ -0.44
GMDS-206ENST00000530075 NUDT7P0C024 238 aa12.3□□□□□ -0.44
GMDS-206ENST00000530075 ZSWIM6Q9HCJ5 1215 aa12.3□□□□□ -0.44
GMDS-206ENST00000530075 DDX12PQ92771 950 aa12.28□□□□□ -0.44
GMDS-206ENST00000530075 GRXCR2A6NFK2 248 aa12.27□□□□□ -0.45
GMDS-206ENST00000530075 DHX30Q7L2E3 1194 aaKnown RBP eCLIP12.27□□□□□ -0.45
GMDS-206ENST00000530075 PTGER2P43116 358 aa12.26□□□□□ -0.45
GMDS-206ENST00000530075 HOXB1P14653 301 aaPredicted RBP12.25□□□□□ -0.45
GMDS-206ENST00000530075 ST18O60284 1047 aa12.23□□□□□ -0.45
GMDS-206ENST00000530075 RBM26Q5T8P6 1007 aaKnown RBP12.23□□□□□ -0.45
GMDS-206ENST00000530075 OSBPP22059 807 aa12.22□□□□□ -0.45
GMDS-206ENST00000530075 PRIM1P49642 420 aaKnown RBP12.22□□□□□ -0.45
GMDS-206ENST00000530075 LMOD2Q6P5Q4 547 aa12.22□□□□□ -0.45
GMDS-206ENST00000530075 ZNF316A6NFI3 1004 aaPredicted RBP12.21□□□□□ -0.45
GMDS-206ENST00000530075 FAM163AQ96GL9 167 aaPredicted RBP12.21□□□□□ -0.45
GMDS-206ENST00000530075 LHX6Q9UPM6 363 aa12.21□□□□□ -0.45
GMDS-206ENST00000530075 SMYD5Q6GMV2 418 aa12.2□□□□□ -0.46
GMDS-206ENST00000530075 PCDHGA10Q9Y5H3 936 aa12.2□□□□□ -0.46
GMDS-206ENST00000530075 LCE2DQ5TA82 110 aaPredicted RBP12.18□□□□□ -0.46
GMDS-206ENST00000530075 TULP1O00294 542 aaPredicted RBP12.16□□□□□ -0.46
GMDS-206ENST00000530075 PHF14O94880 888 aa12.16□□□□□ -0.46
GMDS-206ENST00000530075 PRKCSHP14314 528 aaPredicted RBP12.16□□□□□ -0.46
GMDS-206ENST00000530075 FOSBP53539 338 aa12.16□□□□□ -0.46
GMDS-206ENST00000530075 MARVELD3Q96A59 401 aa12.15□□□□□ -0.46
GMDS-206ENST00000530075 TPRNQ4KMQ1 711 aa12.14□□□□□ -0.47
GMDS-206ENST00000530075 ZNF454Q8N9F8 522 aa12.14□□□□□ -0.47
GMDS-206ENST00000530075 JPH4Q96JJ6 628 aa12.14□□□□□ -0.47
GMDS-206ENST00000530075 RBM33Q96EV2 1170 aaKnown RBP12.11□□□□□ -0.47
GMDS-206ENST00000530075 EPAS1Q99814 870 aa12.11□□□□□ -0.47
GMDS-206ENST00000530075 TYW1BQ6NUM6 668 aa12.1□□□□□ -0.47
GMDS-206ENST00000530075 EN1Q05925 392 aaPredicted RBP12.09□□□□□ -0.47
GMDS-206ENST00000530075 ZDHHC16Q969W1 377 aa12.09□□□□□ -0.47
GMDS-206ENST00000530075 ADAM33Q9BZ11 813 aa12.09□□□□□ -0.47
GMDS-206ENST00000530075 EMP3P54852 163 aa12.08□□□□□ -0.48
GMDS-206ENST00000530075 TSR1Q2NL82 804 aaKnown RBP12.08□□□□□ -0.48
GMDS-206ENST00000530075 ZC3H15Q8WU90 426 aaKnown RBP12.08□□□□□ -0.48
GMDS-206ENST00000530075 NUTM2FA1L443 756 aa12.07□□□□□ -0.48
GMDS-206ENST00000530075 CDHR5Q9HBB8 845 aa12.07□□□□□ -0.48
GMDS-206ENST00000530075 POTEB3A0JP26 581 aa12.06□□□□□ -0.48
GMDS-206ENST00000530075 MAP3K7O43318 606 aa12.06□□□□□ -0.48
GMDS-206ENST00000530075 VARS2Q5ST30 1063 aaKnown RBP12.06□□□□□ -0.48
GMDS-206ENST00000530075 POTEBQ6S5H4 581 aa12.06□□□□□ -0.48
GMDS-206ENST00000530075 GPIHBP1Q8IV16 184 aa12.06□□□□□ -0.48
GMDS-206ENST00000530075 FBXW7Q969H0 707 aa12.06□□□□□ -0.48
GMDS-206ENST00000530075 ERBB3P21860 1342 aa12.06□□□□□ -0.48
GMDS-206ENST00000530075 GPR37O15354 613 aa12.05□□□□□ -0.48
GMDS-206ENST00000530075 FAM205CA6NFA0 338 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 47.3 ms