RNA–Protein interactions for RNA: ENST00000530062.5

PDE4DIP-228, Transcript of phosphodiesterase 4D interacting protein, humanhuman

TSL 2

Gene PDE4DIP, Length 1,076 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE4DIP-228ENST00000530062 EHBP1L1Q8N3D4 1523 aa8.9□□□□□ -0.98
PDE4DIP-228ENST00000530062 CCNB3Q8WWL7 1395 aa8.9□□□□□ -0.98
PDE4DIP-228ENST00000530062 CFDP1Q9UEE9 299 aaPredicted RBP8.89□□□□□ -0.99
PDE4DIP-228ENST00000530062 MYT1LQ9UL68 1186 aa8.89□□□□□ -0.99
PDE4DIP-228ENST00000530062 ZNF777Q9ULD5 760 aaPredicted RBP8.89□□□□□ -0.99
PDE4DIP-228ENST00000530062 PREX2Q70Z35 1606 aa8.89□□□□□ -0.99
PDE4DIP-228ENST00000530062 MAGI2Q86UL8 1455 aa8.89□□□□□ -0.99
PDE4DIP-228ENST00000530062 POGZQ7Z3K3 1410 aa8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 RICTORQ6R327 1708 aa8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 FRMPD1Q5SYB0 1578 aa8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 KDM4FA0A1W2PPD8 638 aa8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 GPATCH8Q9UKJ3 1502 aaKnown RBP8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 ZNF518AQ6AHZ1 1483 aa8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 CDC42BPBQ9Y5S2 1711 aa8.88□□□□□ -0.99
PDE4DIP-228ENST00000530062 TIAM1Q13009 1591 aa8.87□□□□□ -0.99
PDE4DIP-228ENST00000530062 ARID4BQ4LE39 1312 aaPredicted RBP8.87□□□□□ -0.99
PDE4DIP-228ENST00000530062 ZMYM4Q5VZL5 1548 aa8.87□□□□□ -0.99
PDE4DIP-228ENST00000530062 CDC42BPAQ5VT25 1732 aa8.87□□□□□ -0.99
PDE4DIP-228ENST00000530062 MAP3K1Q13233 1512 aa8.86□□□□□ -0.99
PDE4DIP-228ENST00000530062 SUPT6HQ7KZ85 1726 aaKnown RBP8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 ZFYVE16Q7Z3T8 1539 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 LRRC9Q6ZRR7 1453 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 PLEKHH2Q8IVE3 1493 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 AFAP1Q8N556 730 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 ABCC1P33527 1531 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 ARHGEF40Q8TER5 1519 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 ITSN2Q9NZM3 1697 aa8.85□□□□□ -0.99
PDE4DIP-228ENST00000530062 NCOA2Q15596 1464 aa8.84□□□□□ -0.99
PDE4DIP-228ENST00000530062 KIAA1107Q9UPP5 1409 aa8.84□□□□□ -0.99
PDE4DIP-228ENST00000530062 HNRNPMP52272 730 aaKnown RBP eCLIP8.83□□□□□ -1
PDE4DIP-228ENST00000530062 ATP10AO60312 1499 aa8.83□□□□□ -1
PDE4DIP-228ENST00000530062 KDM5CP41229 1560 aa8.82□□□□□ -1
PDE4DIP-228ENST00000530062 SAMD9LQ8IVG5 1584 aa8.82□□□□□ -1
PDE4DIP-228ENST00000530062 YEATS2Q9ULM3 1422 aa8.82□□□□□ -1
PDE4DIP-228ENST00000530062 TRAPPC8Q9Y2L5 1435 aa8.82□□□□□ -1
PDE4DIP-228ENST00000530062 KANK4Q5T7N3 995 aaPredicted RBP8.82□□□□□ -1
PDE4DIP-228ENST00000530062 MLH3Q9UHC1 1453 aa8.82□□□□□ -1
PDE4DIP-228ENST00000530062 HECW2Q9P2P5 1572 aa8.82□□□□□ -1
PDE4DIP-228ENST00000530062 SPAG9O60271 1321 aaKnown RBP8.81□□□□□ -1
PDE4DIP-228ENST00000530062 C9orf84Q5VXU9 1444 aa8.81□□□□□ -1
PDE4DIP-228ENST00000530062 ARHGEF12Q9NZN5 1544 aa8.81□□□□□ -1
PDE4DIP-228ENST00000530062 RSPH4AQ5TD94 716 aa8.81□□□□□ -1
PDE4DIP-228ENST00000530062 SYCP2Q9BX26 1530 aa8.8□□□□□ -1
PDE4DIP-228ENST00000530062 ZNF644Q9H582 1327 aaPredicted RBP8.8□□□□□ -1
PDE4DIP-228ENST00000530062 MLECQ14165 292 aa8.79□□□□□ -1
PDE4DIP-228ENST00000530062 BCORL1Q5H9F3 1711 aa8.79□□□□□ -1
PDE4DIP-228ENST00000530062 TSPY4P0CV99 314 aa8.78□□□□□ -1
PDE4DIP-228ENST00000530062 TSPY10P0CW01 314 aa8.78□□□□□ -1
PDE4DIP-228ENST00000530062 MIA2Q96PC5 1412 aa8.78□□□□□ -1
PDE4DIP-228ENST00000530062 CAMSAP2Q08AD1 1489 aa8.77□□□□□ -1
PDE4DIP-228ENST00000530062 ESF1Q9H501 851 aaKnown RBP8.77□□□□□ -1.01
PDE4DIP-228ENST00000530062 ADAMTSL3P82987 1691 aa8.77□□□□□ -1.01
PDE4DIP-228ENST00000530062 MYOM3Q5VTT5 1437 aa8.77□□□□□ -1.01
PDE4DIP-228ENST00000530062 REREQ9P2R6 1566 aa8.77□□□□□ -1.01
PDE4DIP-228ENST00000530062 DIP2CQ9Y2E4 1556 aa8.77□□□□□ -1.01
PDE4DIP-228ENST00000530062 MBD5Q9P267 1494 aa8.77□□□□□ -1.01
PDE4DIP-228ENST00000530062 KIDINS220Q9ULH0 1771 aa8.76□□□□□ -1.01
PDE4DIP-228ENST00000530062 ATP7AQ04656 1500 aa8.76□□□□□ -1.01
PDE4DIP-228ENST00000530062 PTPRMP28827 1452 aa8.76□□□□□ -1.01
PDE4DIP-228ENST00000530062 CCDC141Q6ZP82 1450 aa8.76□□□□□ -1.01
PDE4DIP-228ENST00000530062 ABCA6Q8N139 1617 aa8.76□□□□□ -1.01
PDE4DIP-228ENST00000530062 MADDQ8WXG6 1647 aa8.76□□□□□ -1.01
PDE4DIP-228ENST00000530062 RTEL1-TNFRSF6BF6WH68 1400 aa8.75□□□□□ -1.01
PDE4DIP-228ENST00000530062 AGLP35573 1532 aa8.74□□□□□ -1.01
PDE4DIP-228ENST00000530062 ARHGEF5Q12774 1597 aa8.73□□□□□ -1.01
PDE4DIP-228ENST00000530062 INO80Q9ULG1 1556 aaPredicted RBP8.73□□□□□ -1.01
PDE4DIP-228ENST00000530062 RIMS1Q86UR5 1692 aaKnown RBP8.73□□□□□ -1.01
PDE4DIP-228ENST00000530062 A2MP01023 1474 aa8.73□□□□□ -1.01
PDE4DIP-228ENST00000530062 PLPPR3Q6T4P5 718 aa8.73□□□□□ -1.01
PDE4DIP-228ENST00000530062 SIGLEC1Q9BZZ2 1709 aa8.73□□□□□ -1.01
PDE4DIP-228ENST00000530062 FER1L4A9Z1Z3 1794 aa8.72□□□□□ -1.01
PDE4DIP-228ENST00000530062 ADGBQ8N7X0 1667 aa8.72□□□□□ -1.01
PDE4DIP-228ENST00000530062 FGD6Q6ZV73 1430 aa8.71□□□□□ -1.01
PDE4DIP-228ENST00000530062 PTPN23Q9H3S7 1636 aa8.71□□□□□ -1.02
PDE4DIP-228ENST00000530062 DHX29Q7Z478 1369 aaKnown RBP8.71□□□□□ -1.02
PDE4DIP-228ENST00000530062 GGT6Q6P531 493 aa8.7□□□□□ -1.02
PDE4DIP-228ENST00000530062 PPP6R1Q9UPN7 881 aa8.7□□□□□ -1.02
PDE4DIP-228ENST00000530062 CNTLNQ9NXG0 1405 aa8.7□□□□□ -1.02
PDE4DIP-228ENST00000530062 PLXNC1O60486 1568 aa8.69□□□□□ -1.02
PDE4DIP-228ENST00000530062 FAM50AQ14320 339 aaKnown RBP8.69□□□□□ -1.02
PDE4DIP-228ENST00000530062 MAST1Q9Y2H9 1570 aa8.69□□□□□ -1.02
PDE4DIP-228ENST00000530062 KIF3BO15066 747 aa8.68□□□□□ -1.02
PDE4DIP-228ENST00000530062 TCOF1Q13428 1488 aaKnown RBP8.68□□□□□ -1.02
PDE4DIP-228ENST00000530062 ABCC5O15440 1437 aa8.67□□□□□ -1.02
PDE4DIP-228ENST00000530062 CEBPAP49715 358 aaPredicted RBP8.67□□□□□ -1.02
PDE4DIP-228ENST00000530062 DAPK1P53355 1430 aa8.67□□□□□ -1.02
PDE4DIP-228ENST00000530062 SHANK2Q9UPX8 1470 aa8.67□□□□□ -1.02
PDE4DIP-228ENST00000530062 PPARGC1BQ86YN6 1023 aaKnown RBP8.66□□□□□ -1.02
PDE4DIP-228ENST00000530062 DNMT1P26358 1616 aaKnown RBP8.65□□□□□ -1.02
PDE4DIP-228ENST00000530062 ZMYM3Q14202 1370 aa8.65□□□□□ -1.02
PDE4DIP-228ENST00000530062 ANKRD30AQ9BXX3 1397 aa8.65□□□□□ -1.02
PDE4DIP-228ENST00000530062 WASHC2CQ9Y4E1 1318 aa8.65□□□□□ -1.02
PDE4DIP-228ENST00000530062 RRP7BPQ9NSQ0 103 aa8.65□□□□□ -1.02
PDE4DIP-228ENST00000530062 CHIC2Q9UKJ5 165 aa8.65□□□□□ -1.02
PDE4DIP-228ENST00000530062 DUOX2Q9NRD8 1548 aa8.64□□□□□ -1.03
PDE4DIP-228ENST00000530062 KIF15Q9NS87 1388 aa8.64□□□□□ -1.03
PDE4DIP-228ENST00000530062 MROH2AA6NES4 1674 aa8.64□□□□□ -1.03
PDE4DIP-228ENST00000530062 CROCC2H7BZ55 1655 aa8.64□□□□□ -1.03
PDE4DIP-228ENST00000530062 C3P01024 1663 aa8.64□□□□□ -1.03
PDE4DIP-228ENST00000530062 FAM135AQ9P2D6 1515 aa8.64□□□□□ -1.03
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms