RNA–Protein interactions for RNA: ENST00000529714.5

SMCO4-205, Transcript of single-pass membrane protein with coiled-coil domains 4, humanhuman

TSL 3

Gene SMCO4, Length 355 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMCO4-205ENST00000529714 CFAP74Q9C0B2 1584 aa21.05■□□□□ 0.96
SMCO4-205ENST00000529714 PPRC1Q5VV67 1664 aaKnown RBP21.05■□□□□ 0.96
SMCO4-205ENST00000529714 TEX14Q8IWB6 1497 aa21.04■□□□□ 0.96
SMCO4-205ENST00000529714 ARHGAP5Q13017 1502 aa21.04■□□□□ 0.96
SMCO4-205ENST00000529714 FGD6Q6ZV73 1430 aa21.02■□□□□ 0.96
SMCO4-205ENST00000529714 FANCAO15360 1455 aa21.01■□□□□ 0.95
SMCO4-205ENST00000529714 NEO1Q92859 1461 aa21.01■□□□□ 0.95
SMCO4-205ENST00000529714 TSPOAP1O95153 1857 aa21.01■□□□□ 0.95
SMCO4-205ENST00000529714 CFDP1Q9UEE9 299 aaPredicted RBP21.01■□□□□ 0.95
SMCO4-205ENST00000529714 EFCAB2Q5VUJ9 269 aa21■□□□□ 0.95
SMCO4-205ENST00000529714 SAMD9LQ8IVG5 1584 aa20.97■□□□□ 0.95
SMCO4-205ENST00000529714 PTPN23Q9H3S7 1636 aa20.96■□□□□ 0.95
SMCO4-205ENST00000529714 TCOF1Q13428 1488 aaKnown RBP20.96■□□□□ 0.95
SMCO4-205ENST00000529714 PLEKHH2Q8IVE3 1493 aa20.96■□□□□ 0.95
SMCO4-205ENST00000529714 RRBP1Q9P2E9 1410 aaKnown RBP20.95■□□□□ 0.95
SMCO4-205ENST00000529714 AKNAQ7Z591 1439 aa20.94■□□□□ 0.94
SMCO4-205ENST00000529714 CAMSAP2Q08AD1 1489 aa20.94■□□□□ 0.94
SMCO4-205ENST00000529714 ABCC1P33527 1531 aa20.94■□□□□ 0.94
SMCO4-205ENST00000529714 KIAA1107Q9UPP5 1409 aa20.93■□□□□ 0.94
SMCO4-205ENST00000529714 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP20.92■□□□□ 0.94
SMCO4-205ENST00000529714 ADGRL1O94910 1474 aa20.91■□□□□ 0.94
SMCO4-205ENST00000529714 ZNF777Q9ULD5 760 aaPredicted RBP20.9■□□□□ 0.94
SMCO4-205ENST00000529714 ZNF644Q9H582 1327 aaPredicted RBP20.88■□□□□ 0.93
SMCO4-205ENST00000529714 ARHGEF5Q12774 1597 aa20.88■□□□□ 0.93
SMCO4-205ENST00000529714 SYCP2Q9BX26 1530 aa20.88■□□□□ 0.93
SMCO4-205ENST00000529714 MBD5Q9P267 1494 aa20.86■□□□□ 0.93
SMCO4-205ENST00000529714 SCAPERQ9BY12 1400 aa20.86■□□□□ 0.93
SMCO4-205ENST00000529714 ARHGEF12Q9NZN5 1544 aa20.85■□□□□ 0.93
SMCO4-205ENST00000529714 DENND4BO75064 1496 aaPredicted RBP20.84■□□□□ 0.93
SMCO4-205ENST00000529714 RSPH4AQ5TD94 716 aa20.84■□□□□ 0.93
SMCO4-205ENST00000529714 DNMT1P26358 1616 aaKnown RBP20.83■□□□□ 0.93
SMCO4-205ENST00000529714 ZNF518AQ6AHZ1 1483 aa20.82■□□□□ 0.92
SMCO4-205ENST00000529714 POGZQ7Z3K3 1410 aa20.82■□□□□ 0.92
SMCO4-205ENST00000529714 FAM50AQ14320 339 aaKnown RBP20.82■□□□□ 0.92
SMCO4-205ENST00000529714 CCDC141Q6ZP82 1450 aa20.81■□□□□ 0.92
SMCO4-205ENST00000529714 RICTORQ6R327 1708 aa20.81■□□□□ 0.92
SMCO4-205ENST00000529714 HNRNPMP52272 730 aaKnown RBP eCLIP20.8■□□□□ 0.922e-6■■■■□ 26
SMCO4-205ENST00000529714 KDM5CP41229 1560 aa20.8■□□□□ 0.92
SMCO4-205ENST00000529714 TRAPPC8Q9Y2L5 1435 aa20.79■□□□□ 0.92
SMCO4-205ENST00000529714 KDM6BO15054 1643 aa20.79■□□□□ 0.92
SMCO4-205ENST00000529714 CROCC2H7BZ55 1655 aa20.79■□□□□ 0.92
SMCO4-205ENST00000529714 FRMPD1Q5SYB0 1578 aa20.78■□□□□ 0.92
SMCO4-205ENST00000529714 COL17A1Q9UMD9 1497 aaPredicted RBP20.78■□□□□ 0.92
SMCO4-205ENST00000529714 SHANK2Q9UPX8 1470 aa20.78■□□□□ 0.92
SMCO4-205ENST00000529714 DAPK1P53355 1430 aa20.78■□□□□ 0.92
SMCO4-205ENST00000529714 ZMYM4Q5VZL5 1548 aa20.77■□□□□ 0.92
SMCO4-205ENST00000529714 ABCC5O15440 1437 aa20.77■□□□□ 0.91
SMCO4-205ENST00000529714 MAST1Q9Y2H9 1570 aa20.76■□□□□ 0.91
SMCO4-205ENST00000529714 RAPGEF3O95398 923 aa20.73■□□□□ 0.91
SMCO4-205ENST00000529714 AFAP1Q8N556 730 aa20.73■□□□□ 0.91
SMCO4-205ENST00000529714 MLH3Q9UHC1 1453 aa20.73■□□□□ 0.91
SMCO4-205ENST00000529714 HECW2Q9P2P5 1572 aa20.72■□□□□ 0.91
SMCO4-205ENST00000529714 INO80Q9ULG1 1556 aaPredicted RBP20.72■□□□□ 0.91
SMCO4-205ENST00000529714 RTEL1-TNFRSF6BF6WH68 1400 aa20.72■□□□□ 0.91
SMCO4-205ENST00000529714 TSPY4P0CV99 314 aa20.72■□□□□ 0.91
SMCO4-205ENST00000529714 TSPY10P0CW01 314 aa20.72■□□□□ 0.91
SMCO4-205ENST00000529714 MAGI2Q86UL8 1455 aa20.72■□□□□ 0.91
SMCO4-205ENST00000529714 C9orf84Q5VXU9 1444 aa20.71■□□□□ 0.91
SMCO4-205ENST00000529714 TRIM26Q12899 539 aaPredicted RBP20.71■□□□□ 0.91
SMCO4-205ENST00000529714 ZFYVE16Q7Z3T8 1539 aa20.71■□□□□ 0.91
SMCO4-205ENST00000529714 SPAG9O60271 1321 aaKnown RBP20.7■□□□□ 0.9
SMCO4-205ENST00000529714 ADGBQ8N7X0 1667 aa20.7■□□□□ 0.9
SMCO4-205ENST00000529714 ATP7AQ04656 1500 aa20.69■□□□□ 0.9
SMCO4-205ENST00000529714 PTPRKQ15262 1439 aa20.69■□□□□ 0.9
SMCO4-205ENST00000529714 ADGRL2O95490 1459 aa20.69■□□□□ 0.9
SMCO4-205ENST00000529714 KIDINS220Q9ULH0 1771 aa20.68■□□□□ 0.9
SMCO4-205ENST00000529714 PLXNC1O60486 1568 aa20.68■□□□□ 0.9
SMCO4-205ENST00000529714 ROCK1Q13464 1354 aa20.66■□□□□ 0.9
SMCO4-205ENST00000529714 ITGAEP38570 1179 aa20.64■□□□□ 0.89
SMCO4-205ENST00000529714 NCOA1Q15788 1441 aa20.63■□□□□ 0.89
SMCO4-205ENST00000529714 ANKRD30AQ9BXX3 1397 aa20.63■□□□□ 0.89
SMCO4-205ENST00000529714 ARHGEF40Q8TER5 1519 aa20.63■□□□□ 0.89
SMCO4-205ENST00000529714 ABCA6Q8N139 1617 aa20.61■□□□□ 0.89
SMCO4-205ENST00000529714 DIP2CQ9Y2E4 1556 aa20.61■□□□□ 0.89
SMCO4-205ENST00000529714 CHIC2Q9UKJ5 165 aa20.59■□□□□ 0.89
SMCO4-205ENST00000529714 YEATS2Q9ULM3 1422 aa20.59■□□□□ 0.89
SMCO4-205ENST00000529714 MYT1LQ9UL68 1186 aa20.58■□□□□ 0.89
SMCO4-205ENST00000529714 REREQ9P2R6 1566 aa20.58■□□□□ 0.88
SMCO4-205ENST00000529714 KIF15Q9NS87 1388 aa20.58■□□□□ 0.88
SMCO4-205ENST00000529714 DUOX2Q9NRD8 1548 aa20.57■□□□□ 0.88
SMCO4-205ENST00000529714 ATP10AO60312 1499 aa20.56■□□□□ 0.88
SMCO4-205ENST00000529714 HFM1A2PYH4 1435 aa20.56■□□□□ 0.88
SMCO4-205ENST00000529714 GCC2Q8IWJ2 1684 aa20.56■□□□□ 0.88
SMCO4-205ENST00000529714 A2MP01023 1474 aa20.54■□□□□ 0.88
SMCO4-205ENST00000529714 NAIPQ13075 1403 aa20.53■□□□□ 0.88
SMCO4-205ENST00000529714 RRP7BPQ9NSQ0 103 aa20.53■□□□□ 0.88
SMCO4-205ENST00000529714 ERBINQ96RT1 1412 aa20.53■□□□□ 0.88
SMCO4-205ENST00000529714 DHX29Q7Z478 1369 aaKnown RBP20.52■□□□□ 0.88
SMCO4-205ENST00000529714 EIF2AK4Q9P2K8 1649 aaKnown RBP20.51■□□□□ 0.87
SMCO4-205ENST00000529714 BCORL1Q5H9F3 1711 aa20.5■□□□□ 0.87
SMCO4-205ENST00000529714 AGLP35573 1532 aa20.49■□□□□ 0.87
SMCO4-205ENST00000529714 ANKRD50Q9ULJ7 1429 aa20.49■□□□□ 0.87
SMCO4-205ENST00000529714 SETD5Q9C0A6 1442 aa20.46■□□□□ 0.87
SMCO4-205ENST00000529714 PCGF6Q9BYE7 350 aa20.45■□□□□ 0.86
SMCO4-205ENST00000529714 SIGLEC1Q9BZZ2 1709 aa20.43■□□□□ 0.86
SMCO4-205ENST00000529714 ACIN1Q9UKV3 1341 aaKnown RBP20.43■□□□□ 0.86
SMCO4-205ENST00000529714 RNF17Q9BXT8 1623 aaKnown RBP20.42■□□□□ 0.86
SMCO4-205ENST00000529714 DEPDC5O75140 1603 aa20.42■□□□□ 0.86
SMCO4-205ENST00000529714 UNC13BO14795 1591 aa20.4■□□□□ 0.86
SMCO4-205ENST00000529714 HRCP23327 699 aa20.4■□□□□ 0.86
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms