RNA–Protein interactions for RNA: ENST00000529524.1

PSMA1-208, Transcript of proteasome subunit alpha 1, humanhuman

TSL 3

Gene PSMA1, Length 743 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMA1-208ENST00000529524 DCAF8L2P0C7V8 631 aa12.51□□□□□ -0.41
PSMA1-208ENST00000529524 HOXB3P14651 431 aaPredicted RBP12.49□□□□□ -0.41
PSMA1-208ENST00000529524 FAM205CA6NFA0 338 aa12.45□□□□□ -0.42
PSMA1-208ENST00000529524 PPP1R37O75864 691 aa12.45□□□□□ -0.42
PSMA1-208ENST00000529524 TMC2Q8TDI7 906 aa12.42□□□□□ -0.42
PSMA1-208ENST00000529524 HOXB1P14653 301 aaPredicted RBP12.41□□□□□ -0.42
PSMA1-208ENST00000529524 C2orf72A6NCS6 295 aa12.4□□□□□ -0.42
PSMA1-208ENST00000529524 HS3ST6Q96QI5 342 aa12.39□□□□□ -0.43
PSMA1-208ENST00000529524 ERBB3P21860 1342 aa12.38□□□□□ -0.43
PSMA1-208ENST00000529524 ZSWIM6Q9HCJ5 1215 aa12.37□□□□□ -0.43
PSMA1-208ENST00000529524 RYDENQ9NUL5 291 aaKnown RBP12.37□□□□□ -0.43
PSMA1-208ENST00000529524 KIF3CO14782 793 aa12.34□□□□□ -0.43
PSMA1-208ENST00000529524 NKX1-1Q15270 411 aaPredicted RBP12.34□□□□□ -0.43
PSMA1-208ENST00000529524 ARSIQ5FYB1 569 aa12.33□□□□□ -0.44
PSMA1-208ENST00000529524 DNAJC5Q9H3Z4 198 aa12.33□□□□□ -0.44
PSMA1-208ENST00000529524 POTEB3A0JP26 581 aa12.32□□□□□ -0.44
PSMA1-208ENST00000529524 POTEBQ6S5H4 581 aa12.32□□□□□ -0.44
PSMA1-208ENST00000529524 GPR153Q6NV75 609 aa12.31□□□□□ -0.44
PSMA1-208ENST00000529524 VARS2Q5ST30 1063 aaKnown RBP12.28□□□□□ -0.44
PSMA1-208ENST00000529524 KHSRPQ92945 711 aaKnown RBP eCLIP12.27□□□□□ -0.452e-18■■■□□ 16.7
PSMA1-208ENST00000529524 GPHNQ9NQX3 736 aaPredicted RBP12.23□□□□□ -0.45
PSMA1-208ENST00000529524 GTPBP6O43824 516 aaPredicted RBP12.21□□□□□ -0.45
PSMA1-208ENST00000529524 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
PSMA1-208ENST00000529524 PCDHGA4Q9Y5G9 962 aa12.21□□□□□ -0.45
PSMA1-208ENST00000529524 SLC34A2O95436 690 aa12.2□□□□□ -0.46
PSMA1-208ENST00000529524 NUDT7P0C024 238 aa12.2□□□□□ -0.46
PSMA1-208ENST00000529524 AMER1Q5JTC6 1135 aaPredicted RBP12.2□□□□□ -0.46
PSMA1-208ENST00000529524 SPNS2Q8IVW8 549 aa12.2□□□□□ -0.46
PSMA1-208ENST00000529524 FOXK1P85037 733 aa12.19□□□□□ -0.46
PSMA1-208ENST00000529524 KRTAP3-3Q9BYR6 98 aa12.19□□□□□ -0.46
PSMA1-208ENST00000529524 KRTAP3-2Q9BYR7 98 aa12.19□□□□□ -0.46
PSMA1-208ENST00000529524 ZNF316A6NFI3 1004 aaPredicted RBP12.18□□□□□ -0.46
PSMA1-208ENST00000529524 DSG2Q14126 1118 aa12.17□□□□□ -0.46
PSMA1-208ENST00000529524 ZNF687Q8N1G0 1237 aa12.17□□□□□ -0.46
PSMA1-208ENST00000529524 TBC1D12O60347 775 aa12.14□□□□□ -0.47
PSMA1-208ENST00000529524 PDE4AP27815 886 aa12.14□□□□□ -0.47
PSMA1-208ENST00000529524 MMRN1Q13201 1228 aa12.13□□□□□ -0.47
PSMA1-208ENST00000529524 LHX6Q9UPM6 363 aa12.12□□□□□ -0.47
PSMA1-208ENST00000529524 PTCD2Q8WV60 388 aaKnown RBP12.11□□□□□ -0.47
PSMA1-208ENST00000529524 RTN4Q9NQC3 1192 aaKnown RBP12.11□□□□□ -0.47
PSMA1-208ENST00000529524 BBXQ8WY36 941 aaPredicted RBP12.09□□□□□ -0.47
PSMA1-208ENST00000529524 PPP1R15BQ5SWA1 713 aa12.08□□□□□ -0.48
PSMA1-208ENST00000529524 LARP6Q9BRS8 491 aaKnown RBP12.08□□□□□ -0.48
PSMA1-208ENST00000529524 CRISPLD2Q9H0B8 497 aa12.08□□□□□ -0.48
PSMA1-208ENST00000529524 ANKRD13DQ6ZTN6 518 aa12.06□□□□□ -0.48
PSMA1-208ENST00000529524 UPF1Q92900 1129 aaKnown RBP eCLIP12.06□□□□□ -0.48
PSMA1-208ENST00000529524 NCKAP5LQ9HCH0 1330 aa12.05□□□□□ -0.48
PSMA1-208ENST00000529524 PSDA5PKW4 1024 aaPredicted RBP12.03□□□□□ -0.48
PSMA1-208ENST00000529524 DDX27Q96GQ7 796 aaKnown RBP12.02□□□□□ -0.49
PSMA1-208ENST00000529524 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.02□□□□□ -0.49
PSMA1-208ENST00000529524 AXIN2Q9Y2T1 843 aa11.99□□□□□ -0.49
PSMA1-208ENST00000529524 PBX2P40425 430 aa11.98□□□□□ -0.49
PSMA1-208ENST00000529524 SPRYD3Q8NCJ5 442 aa11.98□□□□□ -0.49
PSMA1-208ENST00000529524 OXER1Q8TDS5 423 aa11.98□□□□□ -0.49
PSMA1-208ENST00000529524 KDM4FA0A1W2PPD8 638 aa11.96□□□□□ -0.49
PSMA1-208ENST00000529524 LSM11P83369 360 aaKnown RBP eCLIP11.96□□□□□ -0.49
PSMA1-208ENST00000529524 PPP4R3BQ5MIZ7 849 aa11.96□□□□□ -0.49
PSMA1-208ENST00000529524 CADPS2Q86UW7 1296 aa11.96□□□□□ -0.49
PSMA1-208ENST00000529524 MAP3K9P80192 1104 aa11.94□□□□□ -0.5
PSMA1-208ENST00000529524 ARHGAP33O14559 1287 aa11.93□□□□□ -0.5
PSMA1-208ENST00000529524 CFAP44Q96MT7 982 aa11.93□□□□□ -0.5
PSMA1-208ENST00000529524 MYT1LQ9UL68 1186 aa11.93□□□□□ -0.5
PSMA1-208ENST00000529524 MFSD10Q14728 455 aa11.92□□□□□ -0.5
PSMA1-208ENST00000529524 PTGER2P43116 358 aa11.91□□□□□ -0.5
PSMA1-208ENST00000529524 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
PSMA1-208ENST00000529524 PAXIP1Q6ZW49 1069 aaPredicted RBP11.91□□□□□ -0.5
PSMA1-208ENST00000529524 RNF166Q96A37 237 aaPredicted RBP11.91□□□□□ -0.5
PSMA1-208ENST00000529524 ZNF454Q8N9F8 522 aa11.9□□□□□ -0.5
PSMA1-208ENST00000529524 EVI5O60447 810 aa11.89□□□□□ -0.51
PSMA1-208ENST00000529524 KCNH8Q96L42 1107 aa11.89□□□□□ -0.51
PSMA1-208ENST00000529524 PSEN2P49810 448 aa11.87□□□□□ -0.51
PSMA1-208ENST00000529524 KCNK17Q96T54 332 aa11.84□□□□□ -0.51
PSMA1-208ENST00000529524 EMILIN3Q9NT22 766 aa11.84□□□□□ -0.51
PSMA1-208ENST00000529524 STAC3Q96MF2 364 aa11.83□□□□□ -0.52
PSMA1-208ENST00000529524 ANO8Q9HCE9 1232 aaPredicted RBP11.83□□□□□ -0.52
PSMA1-208ENST00000529524 DMRTA1Q5VZB9 504 aa11.82□□□□□ -0.52
PSMA1-208ENST00000529524 ADGRD1Q6QNK2 874 aa11.82□□□□□ -0.52
PSMA1-208ENST00000529524 FOSBP53539 338 aa11.8□□□□□ -0.52
PSMA1-208ENST00000529524 ZDHHC16Q969W1 377 aa11.78□□□□□ -0.52
PSMA1-208ENST00000529524 JPH4Q96JJ6 628 aa11.78□□□□□ -0.52
PSMA1-208ENST00000529524 WDR70Q9NW82 654 aa11.78□□□□□ -0.52
PSMA1-208ENST00000529524 TK2O00142 265 aa11.77□□□□□ -0.53
PSMA1-208ENST00000529524 PTPREP23469 700 aa11.77□□□□□ -0.53
PSMA1-208ENST00000529524 DPYSL4O14531 572 aa11.76□□□□□ -0.53
PSMA1-208ENST00000529524 BCL2L12Q9HB09 334 aa11.76□□□□□ -0.53
PSMA1-208ENST00000529524 CAMK2BQ13554 666 aa11.74□□□□□ -0.53
PSMA1-208ENST00000529524 ADAM33Q9BZ11 813 aa11.72□□□□□ -0.53
PSMA1-208ENST00000529524 VPS9D1Q9Y2B5 631 aa11.7□□□□□ -0.54
PSMA1-208ENST00000529524 PCDHGA10Q9Y5H3 936 aa11.7□□□□□ -0.54
PSMA1-208ENST00000529524 HRO43593 1189 aa11.69□□□□□ -0.54
PSMA1-208ENST00000529524 TYW1BQ6NUM6 668 aa11.69□□□□□ -0.54
PSMA1-208ENST00000529524 PHF14O94880 888 aa11.68□□□□□ -0.54
PSMA1-208ENST00000529524 E2F4Q16254 413 aa11.68□□□□□ -0.54
PSMA1-208ENST00000529524 FBXW7Q969H0 707 aa11.67□□□□□ -0.54
PSMA1-208ENST00000529524 DDX12PQ92771 950 aa11.66□□□□□ -0.54
PSMA1-208ENST00000529524 KCTD12Q96CX2 325 aaKnown RBP11.65□□□□□ -0.54
PSMA1-208ENST00000529524 HCSTQ9UBK5 93 aa11.65□□□□□ -0.54
PSMA1-208ENST00000529524 GOLGA8CPA6NN73 597 aa11.64□□□□□ -0.55
PSMA1-208ENST00000529524 EPAS1Q99814 870 aa11.64□□□□□ -0.55
PSMA1-208ENST00000529524 ZBED2Q9BTP6 218 aa11.64□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 194.8 ms