RNA–Protein interactions for RNA: ENST00000529446.5

C9orf135-207, Transcript of chromosome 9 open reading frame 135, humanhuman

TSL 1 (best)

Gene C9orf135, Length 697 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf135-207ENST00000529446 NEO1Q92859 1461 aa18.14■□□□□ 0.5
C9orf135-207ENST00000529446 EFCAB2Q5VUJ9 269 aa18.14■□□□□ 0.49
C9orf135-207ENST00000529446 MIA2Q96PC5 1412 aa18.14■□□□□ 0.49
C9orf135-207ENST00000529446 ARHGAP5Q13017 1502 aa18.13■□□□□ 0.49
C9orf135-207ENST00000529446 FANCAO15360 1455 aa18.13■□□□□ 0.49
C9orf135-207ENST00000529446 PPRC1Q5VV67 1664 aaKnown RBP18.12■□□□□ 0.49
C9orf135-207ENST00000529446 CFDP1Q9UEE9 299 aaPredicted RBP18.12■□□□□ 0.49
C9orf135-207ENST00000529446 CDC42BPBQ9Y5S2 1711 aa18.12■□□□□ 0.49
C9orf135-207ENST00000529446 PLEKHH2Q8IVE3 1493 aa18.09■□□□□ 0.49
C9orf135-207ENST00000529446 FGD6Q6ZV73 1430 aa18.08■□□□□ 0.49
C9orf135-207ENST00000529446 TSPOAP1O95153 1857 aa18.08■□□□□ 0.49
C9orf135-207ENST00000529446 PPARGC1BQ86YN6 1023 aaKnown RBP18.08■□□□□ 0.48
C9orf135-207ENST00000529446 AKNAQ7Z591 1439 aa18.07■□□□□ 0.48
C9orf135-207ENST00000529446 KIAA1107Q9UPP5 1409 aa18.06■□□□□ 0.48
C9orf135-207ENST00000529446 ADGRL1O94910 1474 aa18.04■□□□□ 0.48
C9orf135-207ENST00000529446 TCOF1Q13428 1488 aaKnown RBP18.04■□□□□ 0.48
C9orf135-207ENST00000529446 SAMD9LQ8IVG5 1584 aa18.04■□□□□ 0.48
C9orf135-207ENST00000529446 ABCC1P33527 1531 aa18.03■□□□□ 0.48
C9orf135-207ENST00000529446 CAMSAP2Q08AD1 1489 aa18.03■□□□□ 0.48
C9orf135-207ENST00000529446 PTPN23Q9H3S7 1636 aa18.02■□□□□ 0.48
C9orf135-207ENST00000529446 ZNF777Q9ULD5 760 aaPredicted RBP18.02■□□□□ 0.48
C9orf135-207ENST00000529446 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.02■□□□□ 0.47
C9orf135-207ENST00000529446 RRBP1Q9P2E9 1410 aaKnown RBP18.01■□□□□ 0.47
C9orf135-207ENST00000529446 SCAPERQ9BY12 1400 aa18■□□□□ 0.47
C9orf135-207ENST00000529446 RSPH4AQ5TD94 716 aa18■□□□□ 0.47
C9orf135-207ENST00000529446 DENND4BO75064 1496 aaPredicted RBP18■□□□□ 0.47
C9orf135-207ENST00000529446 SYCP2Q9BX26 1530 aa17.98■□□□□ 0.47
C9orf135-207ENST00000529446 POGZQ7Z3K3 1410 aa17.98■□□□□ 0.47
C9orf135-207ENST00000529446 ZNF644Q9H582 1327 aaPredicted RBP17.98■□□□□ 0.47
C9orf135-207ENST00000529446 ARHGEF5Q12774 1597 aa17.97■□□□□ 0.47
C9orf135-207ENST00000529446 ZNF518AQ6AHZ1 1483 aa17.97■□□□□ 0.47
C9orf135-207ENST00000529446 MBD5Q9P267 1494 aa17.97■□□□□ 0.47
C9orf135-207ENST00000529446 KDM6BO15054 1643 aa17.96■□□□□ 0.47
C9orf135-207ENST00000529446 ARHGEF12Q9NZN5 1544 aa17.95■□□□□ 0.46
C9orf135-207ENST00000529446 CCDC141Q6ZP82 1450 aa17.94■□□□□ 0.46
C9orf135-207ENST00000529446 HNRNPMP52272 730 aaKnown RBP eCLIP17.93■□□□□ 0.46
C9orf135-207ENST00000529446 FAM50AQ14320 339 aaKnown RBP17.93■□□□□ 0.46
C9orf135-207ENST00000529446 RICTORQ6R327 1708 aa17.92■□□□□ 0.46
C9orf135-207ENST00000529446 KDM5CP41229 1560 aa17.92■□□□□ 0.46
C9orf135-207ENST00000529446 TRAPPC8Q9Y2L5 1435 aa17.92■□□□□ 0.46
C9orf135-207ENST00000529446 COL17A1Q9UMD9 1497 aaPredicted RBP17.92■□□□□ 0.46
C9orf135-207ENST00000529446 DNMT1P26358 1616 aaKnown RBP17.91■□□□□ 0.46
C9orf135-207ENST00000529446 MAGI2Q86UL8 1455 aa17.91■□□□□ 0.46
C9orf135-207ENST00000529446 ZMYM4Q5VZL5 1548 aa17.91■□□□□ 0.46
C9orf135-207ENST00000529446 FRMPD1Q5SYB0 1578 aa17.9■□□□□ 0.46
C9orf135-207ENST00000529446 SHANK2Q9UPX8 1470 aa17.89■□□□□ 0.45
C9orf135-207ENST00000529446 RAPGEF3O95398 923 aa17.89■□□□□ 0.45
C9orf135-207ENST00000529446 TSPY4P0CV99 314 aa17.89■□□□□ 0.45
C9orf135-207ENST00000529446 TSPY10P0CW01 314 aa17.89■□□□□ 0.45
C9orf135-207ENST00000529446 RTEL1-TNFRSF6BF6WH68 1400 aa17.89■□□□□ 0.45
C9orf135-207ENST00000529446 DAPK1P53355 1430 aa17.89■□□□□ 0.45
C9orf135-207ENST00000529446 MLH3Q9UHC1 1453 aa17.88■□□□□ 0.45
C9orf135-207ENST00000529446 AFAP1Q8N556 730 aa17.88■□□□□ 0.45
C9orf135-207ENST00000529446 ABCC5O15440 1437 aa17.88■□□□□ 0.45
C9orf135-207ENST00000529446 SPAG9O60271 1321 aaKnown RBP17.87■□□□□ 0.45
C9orf135-207ENST00000529446 HECW2Q9P2P5 1572 aa17.87■□□□□ 0.45
C9orf135-207ENST00000529446 MAST1Q9Y2H9 1570 aa17.87■□□□□ 0.45
C9orf135-207ENST00000529446 CROCC2H7BZ55 1655 aa17.85■□□□□ 0.45
C9orf135-207ENST00000529446 INO80Q9ULG1 1556 aaPredicted RBP17.84■□□□□ 0.45
C9orf135-207ENST00000529446 C9orf84Q5VXU9 1444 aa17.84■□□□□ 0.45
C9orf135-207ENST00000529446 ATP7AQ04656 1500 aa17.83■□□□□ 0.45
C9orf135-207ENST00000529446 ZFYVE16Q7Z3T8 1539 aa17.83■□□□□ 0.45
C9orf135-207ENST00000529446 ADGRL2O95490 1459 aa17.81■□□□□ 0.44
C9orf135-207ENST00000529446 ARHGEF40Q8TER5 1519 aa17.8■□□□□ 0.44
C9orf135-207ENST00000529446 ROCK1Q13464 1354 aa17.79■□□□□ 0.44
C9orf135-207ENST00000529446 PLXNC1O60486 1568 aa17.79■□□□□ 0.44
C9orf135-207ENST00000529446 KIDINS220Q9ULH0 1771 aa17.79■□□□□ 0.44
C9orf135-207ENST00000529446 MYT1LQ9UL68 1186 aa17.79■□□□□ 0.44
C9orf135-207ENST00000529446 ANKRD30AQ9BXX3 1397 aa17.79■□□□□ 0.44
C9orf135-207ENST00000529446 ADGBQ8N7X0 1667 aa17.78■□□□□ 0.44
C9orf135-207ENST00000529446 TRIM26Q12899 539 aaPredicted RBP17.77■□□□□ 0.44
C9orf135-207ENST00000529446 PTPRKQ15262 1439 aa17.77■□□□□ 0.44
C9orf135-207ENST00000529446 ATP10AO60312 1499 aa17.76■□□□□ 0.43
C9orf135-207ENST00000529446 REREQ9P2R6 1566 aa17.76■□□□□ 0.43
C9orf135-207ENST00000529446 DIP2CQ9Y2E4 1556 aa17.76■□□□□ 0.43
C9orf135-207ENST00000529446 NCOA1Q15788 1441 aa17.76■□□□□ 0.43
C9orf135-207ENST00000529446 YEATS2Q9ULM3 1422 aa17.75■□□□□ 0.43
C9orf135-207ENST00000529446 ITGAEP38570 1179 aa17.75■□□□□ 0.43
C9orf135-207ENST00000529446 ABCA6Q8N139 1617 aa17.75■□□□□ 0.43
C9orf135-207ENST00000529446 CHIC2Q9UKJ5 165 aa17.73■□□□□ 0.43
C9orf135-207ENST00000529446 KIF15Q9NS87 1388 aa17.73■□□□□ 0.43
C9orf135-207ENST00000529446 DUOX2Q9NRD8 1548 aa17.72■□□□□ 0.43
C9orf135-207ENST00000529446 A2MP01023 1474 aa17.72■□□□□ 0.43
C9orf135-207ENST00000529446 DHX29Q7Z478 1369 aaKnown RBP17.71■□□□□ 0.43
C9orf135-207ENST00000529446 HFM1A2PYH4 1435 aa17.69■□□□□ 0.42
C9orf135-207ENST00000529446 ERBINQ96RT1 1412 aa17.69■□□□□ 0.42
C9orf135-207ENST00000529446 AGLP35573 1532 aa17.68■□□□□ 0.42
C9orf135-207ENST00000529446 RRP7BPQ9NSQ0 103 aa17.68■□□□□ 0.42
C9orf135-207ENST00000529446 EIF2AK4Q9P2K8 1649 aaKnown RBP17.66■□□□□ 0.42
C9orf135-207ENST00000529446 NAIPQ13075 1403 aa17.65■□□□□ 0.42
C9orf135-207ENST00000529446 ANKRD50Q9ULJ7 1429 aa17.65■□□□□ 0.42
C9orf135-207ENST00000529446 GCC2Q8IWJ2 1684 aa17.65■□□□□ 0.42
C9orf135-207ENST00000529446 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
C9orf135-207ENST00000529446 ACIN1Q9UKV3 1341 aaKnown RBP17.64■□□□□ 0.41
C9orf135-207ENST00000529446 SETD5Q9C0A6 1442 aa17.6■□□□□ 0.41
C9orf135-207ENST00000529446 ARID4BQ4LE39 1312 aaPredicted RBP17.59■□□□□ 0.41
C9orf135-207ENST00000529446 RNF17Q9BXT8 1623 aaKnown RBP17.58■□□□□ 0.41
C9orf135-207ENST00000529446 KIF3BO15066 747 aa17.58■□□□□ 0.4
C9orf135-207ENST00000529446 PPP6R1Q9UPN7 881 aa17.58■□□□□ 0.4
C9orf135-207ENST00000529446 FAM135AQ9P2D6 1515 aa17.57■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms