RNA–Protein interactions for RNA: ENST00000529214.5

ATPAF1-209, Transcript of ATP synthase mitochondrial F1 complex assembly factor 1, humanhuman

TSL 2

Gene ATPAF1, Length 1,471 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATPAF1-209ENST00000529214 CEP162Q5TB80 1403 aa9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 ZCCHC11Q5TAX3 1644 aaKnown RBP9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 HAP1P54257 671 aaPredicted RBP9.98□□□□□ -0.81
ATPAF1-209ENST00000529214 CHRDL2Q6WN34 429 aa9.97□□□□□ -0.81
ATPAF1-209ENST00000529214 KCNH8Q96L42 1107 aa9.97□□□□□ -0.81
ATPAF1-209ENST00000529214 PLEKHD1A6NEE1 506 aa9.96□□□□□ -0.82
ATPAF1-209ENST00000529214 WDR7Q9Y4E6 1490 aa9.95□□□□□ -0.82
ATPAF1-209ENST00000529214 CASKIN1Q8WXD9 1431 aa9.94□□□□□ -0.82
ATPAF1-209ENST00000529214 EPRSP07814 1512 aaKnown RBP9.94□□□□□ -0.82
ATPAF1-209ENST00000529214 DIP2BQ9P265 1576 aa9.94□□□□□ -0.82
ATPAF1-209ENST00000529214 CDK11AQ9UQ88 783 aaPredicted RBP9.92□□□□□ -0.82
ATPAF1-209ENST00000529214 KIF13AQ9H1H9 1805 aa9.92□□□□□ -0.82
ATPAF1-209ENST00000529214 GLI2P10070 1586 aa9.92□□□□□ -0.82
ATPAF1-209ENST00000529214 TPRNQ4KMQ1 711 aa9.91□□□□□ -0.82
ATPAF1-209ENST00000529214 SP7Q8TDD2 431 aaPredicted RBP9.91□□□□□ -0.82
ATPAF1-209ENST00000529214 ARXQ96QS3 562 aa9.91□□□□□ -0.82
ATPAF1-209ENST00000529214 HECW1Q76N89 1606 aa9.9□□□□□ -0.83
ATPAF1-209ENST00000529214 CDK13Q14004 1512 aaKnown RBP9.89□□□□□ -0.83
ATPAF1-209ENST00000529214 FYCO1Q9BQS8 1478 aa9.89□□□□□ -0.83
ATPAF1-209ENST00000529214 CD109Q6YHK3 1445 aa9.88□□□□□ -0.83
ATPAF1-209ENST00000529214 PCF11O94913 1555 aaKnown RBP9.87□□□□□ -0.83
ATPAF1-209ENST00000529214 CCDC18Q5T9S5 1454 aa9.86□□□□□ -0.83
ATPAF1-209ENST00000529214 VPS8Q8N3P4 1428 aa9.86□□□□□ -0.83
ATPAF1-209ENST00000529214 MAP3K4Q9Y6R4 1608 aa9.85□□□□□ -0.83
ATPAF1-209ENST00000529214 TROQ12816 1431 aaPredicted RBP9.85□□□□□ -0.83
ATPAF1-209ENST00000529214 MAGI3Q5TCQ9 1506 aa9.84□□□□□ -0.83
ATPAF1-209ENST00000529214 LRRIQ1Q96JM4 1722 aa9.84□□□□□ -0.83
ATPAF1-209ENST00000529214 TIMELESSQ9UNS1 1208 aa9.84□□□□□ -0.83
ATPAF1-209ENST00000529214 SLC4A2P04920 1241 aa9.83□□□□□ -0.84
ATPAF1-209ENST00000529214 TSPOAP1O95153 1857 aa9.83□□□□□ -0.84
ATPAF1-209ENST00000529214 ABCA9Q8IUA7 1624 aa9.83□□□□□ -0.84
ATPAF1-209ENST00000529214 TEX14Q8IWB6 1497 aa9.83□□□□□ -0.84
ATPAF1-209ENST00000529214 CFAP43Q8NDM7 1665 aa9.82□□□□□ -0.84
ATPAF1-209ENST00000529214 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP9.82□□□□□ -0.84
ATPAF1-209ENST00000529214 VSIG10Q8N0Z9 540 aa9.82□□□□□ -0.84
ATPAF1-209ENST00000529214 PPRC1Q5VV67 1664 aaKnown RBP9.82□□□□□ -0.84
ATPAF1-209ENST00000529214 MTUS2Q5JR59 1369 aa9.8□□□□□ -0.84
ATPAF1-209ENST00000529214 PHLDB1Q86UU1 1377 aa9.8□□□□□ -0.84
ATPAF1-209ENST00000529214 PLCH2O75038 1416 aa9.8□□□□□ -0.84
ATPAF1-209ENST00000529214 COL17A1Q9UMD9 1497 aaPredicted RBP9.8□□□□□ -0.84
ATPAF1-209ENST00000529214 KANK4Q5T7N3 995 aaPredicted RBP9.79□□□□□ -0.84
ATPAF1-209ENST00000529214 EFCAB2Q5VUJ9 269 aa9.79□□□□□ -0.84
ATPAF1-209ENST00000529214 SAMD1Q6SPF0 538 aaPredicted RBP9.79□□□□□ -0.84
ATPAF1-209ENST00000529214 MAP3K1Q13233 1512 aa9.78□□□□□ -0.84
ATPAF1-209ENST00000529214 NEO1Q92859 1461 aa9.77□□□□□ -0.84
ATPAF1-209ENST00000529214 KIF14Q15058 1648 aa9.77□□□□□ -0.84
ATPAF1-209ENST00000529214 TTC37Q6PGP7 1564 aa9.77□□□□□ -0.85
ATPAF1-209ENST00000529214 AKNAQ7Z591 1439 aa9.76□□□□□ -0.85
ATPAF1-209ENST00000529214 KDM6BO15054 1643 aa9.76□□□□□ -0.85
ATPAF1-209ENST00000529214 TULP1O00294 542 aaPredicted RBP9.76□□□□□ -0.85
ATPAF1-209ENST00000529214 FANCAO15360 1455 aa9.76□□□□□ -0.85
ATPAF1-209ENST00000529214 ARAP3Q8WWN8 1544 aa9.76□□□□□ -0.85
ATPAF1-209ENST00000529214 TIAM1Q13009 1591 aa9.75□□□□□ -0.85
ATPAF1-209ENST00000529214 LRRC9Q6ZRR7 1453 aa9.75□□□□□ -0.85
ATPAF1-209ENST00000529214 RAPGEF3O95398 923 aa9.75□□□□□ -0.85
ATPAF1-209ENST00000529214 GPATCH8Q9UKJ3 1502 aaKnown RBP9.74□□□□□ -0.85
ATPAF1-209ENST00000529214 CCNB3Q8WWL7 1395 aa9.74□□□□□ -0.85
ATPAF1-209ENST00000529214 EHBP1L1Q8N3D4 1523 aa9.73□□□□□ -0.85
ATPAF1-209ENST00000529214 CFDP1Q9UEE9 299 aaPredicted RBP9.73□□□□□ -0.85
ATPAF1-209ENST00000529214 SCAPERQ9BY12 1400 aa9.72□□□□□ -0.85
ATPAF1-209ENST00000529214 ATXN8OSP0DMR3 200 aa9.72□□□□□ -0.85
ATPAF1-209ENST00000529214 ZNF777Q9ULD5 760 aaPredicted RBP9.72□□□□□ -0.85
ATPAF1-209ENST00000529214 DENND4BO75064 1496 aaPredicted RBP9.71□□□□□ -0.85
ATPAF1-209ENST00000529214 NCOA2Q15596 1464 aa9.71□□□□□ -0.85
ATPAF1-209ENST00000529214 ARHGAP5Q13017 1502 aa9.71□□□□□ -0.85
ATPAF1-209ENST00000529214 MYO5CQ9NQX4 1742 aa9.71□□□□□ -0.85
ATPAF1-209ENST00000529214 ADGRL1O94910 1474 aa9.7□□□□□ -0.86
ATPAF1-209ENST00000529214 AFAP1Q8N556 730 aa9.7□□□□□ -0.86
ATPAF1-209ENST00000529214 CDC42BPBQ9Y5S2 1711 aa9.7□□□□□ -0.86
ATPAF1-209ENST00000529214 CFAP74Q9C0B2 1584 aa9.69□□□□□ -0.86
ATPAF1-209ENST00000529214 ZNF644Q9H582 1327 aaPredicted RBP9.69□□□□□ -0.86
ATPAF1-209ENST00000529214 HNRNPMP52272 730 aaKnown RBP eCLIP9.69□□□□□ -0.86
ATPAF1-209ENST00000529214 CDC42BPAQ5VT25 1732 aa9.69□□□□□ -0.86
ATPAF1-209ENST00000529214 PREX2Q70Z35 1606 aa9.69□□□□□ -0.86
ATPAF1-209ENST00000529214 SUPT6HQ7KZ85 1726 aaKnown RBP9.68□□□□□ -0.86
ATPAF1-209ENST00000529214 KIAA1107Q9UPP5 1409 aa9.68□□□□□ -0.86
ATPAF1-209ENST00000529214 ARHGEF12Q9NZN5 1544 aa9.67□□□□□ -0.86
ATPAF1-209ENST00000529214 POGZQ7Z3K3 1410 aa9.66□□□□□ -0.86
ATPAF1-209ENST00000529214 TRAPPC8Q9Y2L5 1435 aa9.66□□□□□ -0.86
ATPAF1-209ENST00000529214 RSPH4AQ5TD94 716 aa9.66□□□□□ -0.86
ATPAF1-209ENST00000529214 ZNF518AQ6AHZ1 1483 aa9.65□□□□□ -0.87
ATPAF1-209ENST00000529214 PLEKHH2Q8IVE3 1493 aa9.65□□□□□ -0.87
ATPAF1-209ENST00000529214 MYOM3Q5VTT5 1437 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 MIA2Q96PC5 1412 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 FRMPD1Q5SYB0 1578 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 SAMD9LQ8IVG5 1584 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 RICTORQ6R327 1708 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 ABCC1P33527 1531 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 MAGI2Q86UL8 1455 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 POLA2Q14181 598 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 PPARGC1BQ86YN6 1023 aaKnown RBP9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 HOMEZQ8IX15 550 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 AKT1S1Q96B36 256 aa9.64□□□□□ -0.87
ATPAF1-209ENST00000529214 MBD5Q9P267 1494 aa9.63□□□□□ -0.87
ATPAF1-209ENST00000529214 MYT1LQ9UL68 1186 aa9.63□□□□□ -0.87
ATPAF1-209ENST00000529214 ITSN2Q9NZM3 1697 aa9.62□□□□□ -0.87
ATPAF1-209ENST00000529214 ZMYM4Q5VZL5 1548 aa9.62□□□□□ -0.87
ATPAF1-209ENST00000529214 MLH3Q9UHC1 1453 aa9.62□□□□□ -0.87
ATPAF1-209ENST00000529214 SPAG9O60271 1321 aaKnown RBP9.62□□□□□ -0.87
ATPAF1-209ENST00000529214 YEATS2Q9ULM3 1422 aa9.61□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms