RNA–Protein interactions for RNA: ENST00000528907.5

UBXN1-209, Transcript of UBX domain protein 1, humanhuman

TSL 2

Gene UBXN1, Length 861 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-209ENST00000528907 CDC42BPBQ9Y5S2 1711 aa22.47■■□□□ 1.19
UBXN1-209ENST00000528907 CFAP74Q9C0B2 1584 aa22.46■■□□□ 1.19
UBXN1-209ENST00000528907 GPATCH8Q9UKJ3 1502 aaKnown RBP22.46■■□□□ 1.19
UBXN1-209ENST00000528907 PHLDB1Q86UU1 1377 aa22.45■■□□□ 1.18
UBXN1-209ENST00000528907 NEO1Q92859 1461 aa22.45■■□□□ 1.18
UBXN1-209ENST00000528907 CCNB3Q8WWL7 1395 aa22.42■■□□□ 1.18
UBXN1-209ENST00000528907 FANCAO15360 1455 aa22.41■■□□□ 1.18
UBXN1-209ENST00000528907 ARHGAP5Q13017 1502 aa22.38■■□□□ 1.17
UBXN1-209ENST00000528907 EFCAB2Q5VUJ9 269 aa22.37■■□□□ 1.17
UBXN1-209ENST00000528907 MYOM3Q5VTT5 1437 aa22.36■■□□□ 1.17
UBXN1-209ENST00000528907 MIA2Q96PC5 1412 aa22.36■■□□□ 1.17
UBXN1-209ENST00000528907 AKNAQ7Z591 1439 aa22.34■■□□□ 1.17
UBXN1-209ENST00000528907 CFDP1Q9UEE9 299 aaPredicted RBP22.32■■□□□ 1.16
UBXN1-209ENST00000528907 SAMD9LQ8IVG5 1584 aa22.32■■□□□ 1.16
UBXN1-209ENST00000528907 PLEKHH2Q8IVE3 1493 aa22.31■■□□□ 1.16
UBXN1-209ENST00000528907 ABCC1P33527 1531 aa22.31■■□□□ 1.16
UBXN1-209ENST00000528907 ADGRL1O94910 1474 aa22.29■■□□□ 1.16
UBXN1-209ENST00000528907 KIAA1107Q9UPP5 1409 aa22.29■■□□□ 1.16
UBXN1-209ENST00000528907 FGD6Q6ZV73 1430 aa22.26■■□□□ 1.15
UBXN1-209ENST00000528907 TCOF1Q13428 1488 aaKnown RBP22.26■■□□□ 1.15
UBXN1-209ENST00000528907 COL17A1Q9UMD9 1497 aaPredicted RBP22.26■■□□□ 1.15
UBXN1-209ENST00000528907 RICTORQ6R327 1708 aa22.26■■□□□ 1.15
UBXN1-209ENST00000528907 PTPN23Q9H3S7 1636 aa22.24■■□□□ 1.15
UBXN1-209ENST00000528907 DENND4BO75064 1496 aaPredicted RBP22.24■■□□□ 1.15
UBXN1-209ENST00000528907 CAMSAP2Q08AD1 1489 aa22.24■■□□□ 1.15
UBXN1-209ENST00000528907 SCAPERQ9BY12 1400 aa22.23■■□□□ 1.15
UBXN1-209ENST00000528907 ARHGEF12Q9NZN5 1544 aa22.22■■□□□ 1.15
UBXN1-209ENST00000528907 FRMPD1Q5SYB0 1578 aa22.22■■□□□ 1.15
UBXN1-209ENST00000528907 POGZQ7Z3K3 1410 aa22.22■■□□□ 1.15
UBXN1-209ENST00000528907 MBD5Q9P267 1494 aa22.21■■□□□ 1.15
UBXN1-209ENST00000528907 SYCP2Q9BX26 1530 aa22.21■■□□□ 1.15
UBXN1-209ENST00000528907 ARHGEF5Q12774 1597 aa22.21■■□□□ 1.15
UBXN1-209ENST00000528907 PPARGC1BQ86YN6 1023 aaKnown RBP22.2■■□□□ 1.14
UBXN1-209ENST00000528907 KDM5CP41229 1560 aa22.2■■□□□ 1.14
UBXN1-209ENST00000528907 ZNF777Q9ULD5 760 aaPredicted RBP22.19■■□□□ 1.14
UBXN1-209ENST00000528907 ZNF518AQ6AHZ1 1483 aa22.19■■□□□ 1.14
UBXN1-209ENST00000528907 ZMYM4Q5VZL5 1548 aa22.19■■□□□ 1.14
UBXN1-209ENST00000528907 HECW2Q9P2P5 1572 aa22.18■■□□□ 1.14
UBXN1-209ENST00000528907 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP22.18■■□□□ 1.14
UBXN1-209ENST00000528907 ZNF644Q9H582 1327 aaPredicted RBP22.18■■□□□ 1.14
UBXN1-209ENST00000528907 RSPH4AQ5TD94 716 aa22.18■■□□□ 1.14
UBXN1-209ENST00000528907 RRBP1Q9P2E9 1410 aaKnown RBP22.17■■□□□ 1.14
UBXN1-209ENST00000528907 TRAPPC8Q9Y2L5 1435 aa22.15■■□□□ 1.14
UBXN1-209ENST00000528907 MAGI2Q86UL8 1455 aa22.15■■□□□ 1.14
UBXN1-209ENST00000528907 CCDC141Q6ZP82 1450 aa22.13■■□□□ 1.13
UBXN1-209ENST00000528907 MLH3Q9UHC1 1453 aa22.12■■□□□ 1.13
UBXN1-209ENST00000528907 RAPGEF3O95398 923 aa22.12■■□□□ 1.13
UBXN1-209ENST00000528907 HNRNPMP52272 730 aaKnown RBP eCLIP22.12■■□□□ 1.13
UBXN1-209ENST00000528907 DNMT1P26358 1616 aaKnown RBP22.12■■□□□ 1.13
UBXN1-209ENST00000528907 MAST1Q9Y2H9 1570 aa22.1■■□□□ 1.13
UBXN1-209ENST00000528907 CROCC2H7BZ55 1655 aa22.1■■□□□ 1.13
UBXN1-209ENST00000528907 AFAP1Q8N556 730 aa22.09■■□□□ 1.13
UBXN1-209ENST00000528907 INO80Q9ULG1 1556 aaPredicted RBP22.08■■□□□ 1.13
UBXN1-209ENST00000528907 RTEL1-TNFRSF6BF6WH68 1400 aa22.07■■□□□ 1.12
UBXN1-209ENST00000528907 SHANK2Q9UPX8 1470 aa22.07■■□□□ 1.12
UBXN1-209ENST00000528907 KIDINS220Q9ULH0 1771 aa22.07■■□□□ 1.12
UBXN1-209ENST00000528907 ABCC5O15440 1437 aa22.06■■□□□ 1.12
UBXN1-209ENST00000528907 DAPK1P53355 1430 aa22.06■■□□□ 1.12
UBXN1-209ENST00000528907 ZFYVE16Q7Z3T8 1539 aa22.05■■□□□ 1.12
UBXN1-209ENST00000528907 ATP7AQ04656 1500 aa22.04■■□□□ 1.12
UBXN1-209ENST00000528907 ARHGEF40Q8TER5 1519 aa22.04■■□□□ 1.12
UBXN1-209ENST00000528907 SPAG9O60271 1321 aaKnown RBP22.02■■□□□ 1.12
UBXN1-209ENST00000528907 TSPY4P0CV99 314 aa22.01■■□□□ 1.11
UBXN1-209ENST00000528907 TSPY10P0CW01 314 aa22.01■■□□□ 1.11
UBXN1-209ENST00000528907 FAM50AQ14320 339 aaKnown RBP22.01■■□□□ 1.11
UBXN1-209ENST00000528907 REREQ9P2R6 1566 aa22■■□□□ 1.11
UBXN1-209ENST00000528907 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
UBXN1-209ENST00000528907 DIP2CQ9Y2E4 1556 aa21.99■■□□□ 1.11
UBXN1-209ENST00000528907 ABCA6Q8N139 1617 aa21.99■■□□□ 1.11
UBXN1-209ENST00000528907 C9orf84Q5VXU9 1444 aa21.98■■□□□ 1.11
UBXN1-209ENST00000528907 ADGBQ8N7X0 1667 aa21.98■■□□□ 1.11
UBXN1-209ENST00000528907 YEATS2Q9ULM3 1422 aa21.97■■□□□ 1.11
UBXN1-209ENST00000528907 ADGRL2O95490 1459 aa21.97■■□□□ 1.11
UBXN1-209ENST00000528907 ATP10AO60312 1499 aa21.96■■□□□ 1.11
UBXN1-209ENST00000528907 PTPRKQ15262 1439 aa21.93■■□□□ 1.1
UBXN1-209ENST00000528907 ROCK1Q13464 1354 aa21.92■■□□□ 1.1
UBXN1-209ENST00000528907 AGLP35573 1532 aa21.9■■□□□ 1.1
UBXN1-209ENST00000528907 NCOA1Q15788 1441 aa21.9■■□□□ 1.1
UBXN1-209ENST00000528907 FBXO41Q8TF61 875 aa21.9■■□□□ 1.1
UBXN1-209ENST00000528907 ANKRD30AQ9BXX3 1397 aa21.89■■□□□ 1.1
UBXN1-209ENST00000528907 A2MP01023 1474 aa21.89■■□□□ 1.09
UBXN1-209ENST00000528907 BCORL1Q5H9F3 1711 aa21.89■■□□□ 1.09
UBXN1-209ENST00000528907 MYT1LQ9UL68 1186 aa21.88■■□□□ 1.09
UBXN1-209ENST00000528907 DUOX2Q9NRD8 1548 aa21.87■■□□□ 1.09
UBXN1-209ENST00000528907 DHX29Q7Z478 1369 aaKnown RBP21.87■■□□□ 1.09
UBXN1-209ENST00000528907 SIGLEC1Q9BZZ2 1709 aa21.86■■□□□ 1.09
UBXN1-209ENST00000528907 EIF2AK4Q9P2K8 1649 aaKnown RBP21.85■■□□□ 1.09
UBXN1-209ENST00000528907 KIF15Q9NS87 1388 aa21.83■■□□□ 1.08
UBXN1-209ENST00000528907 ERBINQ96RT1 1412 aa21.82■■□□□ 1.08
UBXN1-209ENST00000528907 CHIC2Q9UKJ5 165 aa21.81■■□□□ 1.08
UBXN1-209ENST00000528907 GCC2Q8IWJ2 1684 aa21.8■■□□□ 1.08
UBXN1-209ENST00000528907 ITGAEP38570 1179 aa21.78■■□□□ 1.08
UBXN1-209ENST00000528907 RRP7BPQ9NSQ0 103 aa21.77■■□□□ 1.08
UBXN1-209ENST00000528907 HFM1A2PYH4 1435 aa21.77■■□□□ 1.08
UBXN1-209ENST00000528907 RNF17Q9BXT8 1623 aaKnown RBP21.76■■□□□ 1.07
UBXN1-209ENST00000528907 NAIPQ13075 1403 aa21.74■■□□□ 1.07
UBXN1-209ENST00000528907 ANKRD50Q9ULJ7 1429 aa21.74■■□□□ 1.07
UBXN1-209ENST00000528907 DEPDC5O75140 1603 aa21.74■■□□□ 1.07
UBXN1-209ENST00000528907 FAM135AQ9P2D6 1515 aa21.73■■□□□ 1.07
UBXN1-209ENST00000528907 ADAMTSL3P82987 1691 aa21.72■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms