RNA–Protein interactions for RNA: ENST00000528621.5

CTNND1-219, Transcript of catenin delta 1, humanhuman

TSL 1 (best) BASIC

Gene CTNND1, Length 5,907 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-219ENST00000528621 RALBP1Q15311 655 aa10.87□□□□□ -0.67
CTNND1-219ENST00000528621 NOP58Q9Y2X3 529 aaKnown RBP10.87□□□□□ -0.67
CTNND1-219ENST00000528621 RAPGEF2Q9Y4G8 1499 aa10.87□□□□□ -0.67
CTNND1-219ENST00000528621 HDGFL2Q7Z4V5 671 aaPredicted RBP10.87□□□□□ -0.67
CTNND1-219ENST00000528621 HSPA5P11021 654 aaKnown RBP10.86□□□□□ -0.67
CTNND1-219ENST00000528621 MCCP23508 829 aa10.86□□□□□ -0.67
CTNND1-219ENST00000528621 DNTTIP2Q5QJE6 756 aaKnown RBP10.86□□□□□ -0.67
CTNND1-219ENST00000528621 ROCK2O75116 1388 aaKnown RBP10.86□□□□□ -0.67
CTNND1-219ENST00000528621 PTMSP20962 102 aa10.86□□□□□ -0.67
CTNND1-219ENST00000528621 CCDC18Q5T9S5 1454 aa10.85□□□□□ -0.67
CTNND1-219ENST00000528621 GOLGA2Q08379 1002 aa10.85□□□□□ -0.67
CTNND1-219ENST00000528621 HSCBQ8IWL3 235 aa10.85□□□□□ -0.67
CTNND1-219ENST00000528621 RSPH4AQ5TD94 716 aa10.85□□□□□ -0.67
CTNND1-219ENST00000528621 WIZO95785 1651 aa10.85□□□□□ -0.67
CTNND1-219ENST00000528621 KCNJ4P48050 445 aa10.85□□□□□ -0.67
CTNND1-219ENST00000528621 FGD1P98174 961 aa10.84□□□□□ -0.67
CTNND1-219ENST00000528621 CHMP4AQ9BY43 222 aa10.84□□□□□ -0.67
CTNND1-219ENST00000528621 MLECQ14165 292 aa10.84□□□□□ -0.67
CTNND1-219ENST00000528621 RTF1Q92541 710 aaKnown RBP10.84□□□□□ -0.67
CTNND1-219ENST00000528621 IPO8O15397 1037 aaKnown RBP10.84□□□□□ -0.67
CTNND1-219ENST00000528621 PKD2Q13563 968 aa10.83□□□□□ -0.68
CTNND1-219ENST00000528621 EFCAB2Q5VUJ9 269 aa10.82□□□□□ -0.68
CTNND1-219ENST00000528621 NAP1L2Q9ULW6 460 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-219ENST00000528621 TULP1O00294 542 aaPredicted RBP10.82□□□□□ -0.68
CTNND1-219ENST00000528621 NRDCO43847 1150 aa10.81□□□□□ -0.68
CTNND1-219ENST00000528621 TRHP20396 242 aaPredicted RBP10.81□□□□□ -0.68
CTNND1-219ENST00000528621 RAB3GAP2Q9H2M9 1393 aa10.81□□□□□ -0.68
CTNND1-219ENST00000528621 SMARCA4P51532 1647 aa10.81□□□□□ -0.68
CTNND1-219ENST00000528621 MPHOSPH9Q99550 1183 aa10.8□□□□□ -0.68
CTNND1-219ENST00000528621 SAFB2Q14151 953 aaKnown RBP eCLIP10.8□□□□□ -0.68
CTNND1-219ENST00000528621 TAOK2Q9UL54 1235 aa10.8□□□□□ -0.68
CTNND1-219ENST00000528621 L1TD1Q5T7N2 865 aaKnown RBP10.8□□□□□ -0.68
CTNND1-219ENST00000528621 B4GALNT3Q6L9W6 998 aa10.8□□□□□ -0.68
CTNND1-219ENST00000528621 GGT6Q6P531 493 aa10.79□□□□□ -0.68
CTNND1-219ENST00000528621 STK26Q9P289 416 aa10.79□□□□□ -0.68
CTNND1-219ENST00000528621 SOX12O15370 315 aa10.79□□□□□ -0.68
CTNND1-219ENST00000528621 CADPSQ9ULU8 1353 aa10.79□□□□□ -0.68
CTNND1-219ENST00000528621 PLCB2Q00722 1185 aa10.79□□□□□ -0.68
CTNND1-219ENST00000528621 NUP155O75694 1391 aa10.79□□□□□ -0.68
CTNND1-219ENST00000528621 PHLDB1Q86UU1 1377 aa10.78□□□□□ -0.68
CTNND1-219ENST00000528621 KANK4Q5T7N3 995 aaPredicted RBP10.77□□□□□ -0.68
CTNND1-219ENST00000528621 GOLGA6L4A6NEF3 574 aa10.77□□□□□ -0.68
CTNND1-219ENST00000528621 UACAQ9BZF9 1416 aa10.77□□□□□ -0.69
CTNND1-219ENST00000528621 NAP1L5Q96NT1 182 aaPredicted RBP10.77□□□□□ -0.69
CTNND1-219ENST00000528621 FOXD1Q16676 465 aa10.77□□□□□ -0.69
CTNND1-219ENST00000528621 RWDD1Q9H446 243 aaPredicted RBP10.76□□□□□ -0.69
CTNND1-219ENST00000528621 PMFBP1Q8TBY8 1022 aa10.76□□□□□ -0.69
CTNND1-219ENST00000528621 HDAC5Q9UQL6 1122 aa10.75□□□□□ -0.69
CTNND1-219ENST00000528621 PAK3O75914 559 aaPredicted RBP10.74□□□□□ -0.69
CTNND1-219ENST00000528621 ITPRIPQ8IWB1 547 aa10.73□□□□□ -0.69
CTNND1-219ENST00000528621 TERF2IPQ9NYB0 399 aa10.73□□□□□ -0.69
CTNND1-219ENST00000528621 PDE3BQ13370 1112 aa10.73□□□□□ -0.69
CTNND1-219ENST00000528621 TDRD9Q8NDG6 1382 aaKnown RBP10.73□□□□□ -0.69
CTNND1-219ENST00000528621 ATAD2BQ9ULI0 1458 aa10.73□□□□□ -0.69
CTNND1-219ENST00000528621 TCERG1O14776 1098 aaKnown RBP10.73□□□□□ -0.69
CTNND1-219ENST00000528621 RCAN3Q9UKA8 241 aa10.73□□□□□ -0.69
CTNND1-219ENST00000528621 CHAF1AQ13111 956 aaPredicted RBP10.73□□□□□ -0.69
CTNND1-219ENST00000528621 LMOD3Q0VAK6 560 aa10.72□□□□□ -0.69
CTNND1-219ENST00000528621 FHOD3Q2V2M9 1422 aa10.72□□□□□ -0.69
CTNND1-219ENST00000528621 GNL2Q13823 731 aaKnown RBP10.72□□□□□ -0.69
CTNND1-219ENST00000528621 SPAG9O60271 1321 aaKnown RBP10.72□□□□□ -0.69
CTNND1-219ENST00000528621 KIAA1211Q6ZU35 1233 aa10.72□□□□□ -0.69
CTNND1-219ENST00000528621 U2AF1L5P0DN76 240 aaPredicted RBP10.72□□□□□ -0.69
CTNND1-219ENST00000528621 U2AF1Q01081 240 aaKnown RBP eCLIP10.72□□□□□ -0.692e-10■■□□□ 12.3
CTNND1-219ENST00000528621 KIF15Q9NS87 1388 aa10.72□□□□□ -0.69
CTNND1-219ENST00000528621 HTATSF1O43719 755 aaKnown RBP10.71□□□□□ -0.69
CTNND1-219ENST00000528621 CSB-PGBD3P0DP91 1061 aa10.71□□□□□ -0.69
CTNND1-219ENST00000528621 SPRYD3Q8NCJ5 442 aa10.71□□□□□ -0.69
CTNND1-219ENST00000528621 GBP4Q96PP9 640 aa10.71□□□□□ -0.7
CTNND1-219ENST00000528621 GPATCH3Q96I76 525 aa10.7□□□□□ -0.7
CTNND1-219ENST00000528621 MSNP26038 577 aaKnown RBP10.7□□□□□ -0.7
CTNND1-219ENST00000528621 DRC7Q8IY82 874 aa10.7□□□□□ -0.7
CTNND1-219ENST00000528621 HNRNPMP52272 730 aaKnown RBP eCLIP10.7□□□□□ -0.75e-7■■■■□ 21
CTNND1-219ENST00000528621 CUX1P39880 1505 aa10.7□□□□□ -0.7
CTNND1-219ENST00000528621 EID1Q9Y6B2 187 aa10.69□□□□□ -0.7
CTNND1-219ENST00000528621 FANCD2Q9BXW9 1451 aa10.68□□□□□ -0.7
CTNND1-219ENST00000528621 APBB1O00213 710 aa10.68□□□□□ -0.7
CTNND1-219ENST00000528621 HMMRO75330 724 aa10.68□□□□□ -0.7
CTNND1-219ENST00000528621 KIF3BO15066 747 aa10.68□□□□□ -0.7
CTNND1-219ENST00000528621 STK31Q9BXU1 1019 aa10.68□□□□□ -0.7
CTNND1-219ENST00000528621 CLSTN1O94985 981 aa10.67□□□□□ -0.7
CTNND1-219ENST00000528621 SYAP1Q96A49 352 aaPredicted RBP10.67□□□□□ -0.7
CTNND1-219ENST00000528621 ISY1Q9ULR0 285 aaKnown RBP10.67□□□□□ -0.7
CTNND1-219ENST00000528621 CCDC144AA2RUR9 1427 aa10.66□□□□□ -0.7
CTNND1-219ENST00000528621 CSPP1Q1MSJ5 1256 aa10.66□□□□□ -0.7
CTNND1-219ENST00000528621 NLRP13Q86W25 1043 aa10.66□□□□□ -0.7
CTNND1-219ENST00000528621 MYBBP1AQ9BQG0 1328 aaKnown RBP10.65□□□□□ -0.7
CTNND1-219ENST00000528621 SMC4Q9NTJ3 1288 aa10.65□□□□□ -0.7
CTNND1-219ENST00000528621 TMX4Q9H1E5 349 aaPredicted RBP10.65□□□□□ -0.7
CTNND1-219ENST00000528621 WASHC2CQ9Y4E1 1318 aa10.65□□□□□ -0.7
CTNND1-219ENST00000528621 RTN4Q9NQC3 1192 aaKnown RBP10.65□□□□□ -0.71
CTNND1-219ENST00000528621 TPM4P67936 248 aa10.64□□□□□ -0.71
CTNND1-219ENST00000528621 RBM19Q9Y4C8 960 aaKnown RBP10.63□□□□□ -0.71
CTNND1-219ENST00000528621 ZNF330Q9Y3S2 320 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-219ENST00000528621 CENPJQ9HC77 1338 aaPredicted RBP10.63□□□□□ -0.71
CTNND1-219ENST00000528621 KIAA2012Q0VF49 1180 aa10.63□□□□□ -0.71
CTNND1-219ENST00000528621 CCDC146Q8IYE0 955 aa10.63□□□□□ -0.71
CTNND1-219ENST00000528621 L3MBTL2Q969R5 705 aa10.63□□□□□ -0.71
CTNND1-219ENST00000528621 HSP90B1P14625 803 aaKnown RBP10.62□□□□□ -0.71
CTNND1-219ENST00000528621 GORABQ5T7V8 394 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms