RNA–Protein interactions for RNA: ENST00000528608.5

COMMD9-205, Transcript of COMM domain containing 9, humanhuman

TSL 2

Gene COMMD9, Length 988 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD9-205ENST00000528608 PPP1R37O75864 691 aa16.76■□□□□ 0.27
COMMD9-205ENST00000528608 ZNF710Q8N1W2 664 aa16.76■□□□□ 0.27
COMMD9-205ENST00000528608 DNAJC5Q9H3Z4 198 aa16.74■□□□□ 0.27
COMMD9-205ENST00000528608 EMP3P54852 163 aa16.72■□□□□ 0.27
COMMD9-205ENST00000528608 RIMBP2O15034 1052 aa16.71■□□□□ 0.27
COMMD9-205ENST00000528608 NKX1-1Q15270 411 aaPredicted RBP16.71■□□□□ 0.27
COMMD9-205ENST00000528608 RYDENQ9NUL5 291 aaKnown RBP16.68■□□□□ 0.26
COMMD9-205ENST00000528608 CDAN1Q8IWY9 1227 aa16.67■□□□□ 0.26
COMMD9-205ENST00000528608 C2orf72A6NCS6 295 aa16.65■□□□□ 0.26
COMMD9-205ENST00000528608 AMER1Q5JTC6 1135 aaPredicted RBP16.65■□□□□ 0.26
COMMD9-205ENST00000528608 PLSCR2Q9NRY7 297 aa16.65■□□□□ 0.26
COMMD9-205ENST00000528608 TMC2Q8TDI7 906 aa16.64■□□□□ 0.25
COMMD9-205ENST00000528608 KIF3CO14782 793 aa16.62■□□□□ 0.25
COMMD9-205ENST00000528608 HOXB1P14653 301 aaPredicted RBP16.62■□□□□ 0.25
COMMD9-205ENST00000528608 FAM205CA6NFA0 338 aa16.59■□□□□ 0.25
COMMD9-205ENST00000528608 ZSWIM6Q9HCJ5 1215 aa16.59■□□□□ 0.25
COMMD9-205ENST00000528608 ZCCHC6Q5VYS8 1495 aaKnown RBP16.57■□□□□ 0.24
COMMD9-205ENST00000528608 NACADO15069 1562 aa16.56■□□□□ 0.24
COMMD9-205ENST00000528608 RB1CC1Q8TDY2 1594 aa16.56■□□□□ 0.24
COMMD9-205ENST00000528608 HS3ST6Q96QI5 342 aa16.55■□□□□ 0.24
COMMD9-205ENST00000528608 RTN4Q9NQC3 1192 aaKnown RBP16.53■□□□□ 0.24
COMMD9-205ENST00000528608 GTPBP6O43824 516 aaPredicted RBP16.5■□□□□ 0.23
COMMD9-205ENST00000528608 GPR153Q6NV75 609 aa16.5■□□□□ 0.23
COMMD9-205ENST00000528608 ERBB3P21860 1342 aa16.49■□□□□ 0.23
COMMD9-205ENST00000528608 ARSIQ5FYB1 569 aa16.48■□□□□ 0.23
COMMD9-205ENST00000528608 POTEB3A0JP26 581 aa16.47■□□□□ 0.23
COMMD9-205ENST00000528608 POTEBQ6S5H4 581 aa16.47■□□□□ 0.23
COMMD9-205ENST00000528608 MYO15BQ96JP2 1530 aa16.45■□□□□ 0.22
COMMD9-205ENST00000528608 GPHNQ9NQX3 736 aaPredicted RBP16.44■□□□□ 0.22
COMMD9-205ENST00000528608 DCAF1Q9Y4B6 1507 aa16.42■□□□□ 0.22
COMMD9-205ENST00000528608 KHSRPQ92945 711 aaKnown RBP eCLIP16.42■□□□□ 0.22
COMMD9-205ENST00000528608 FOXK1P85037 733 aa16.41■□□□□ 0.22
COMMD9-205ENST00000528608 VARS2Q5ST30 1063 aaKnown RBP16.41■□□□□ 0.22
COMMD9-205ENST00000528608 SLC34A2O95436 690 aa16.4■□□□□ 0.22
COMMD9-205ENST00000528608 PLPP6Q8IY26 295 aa16.39■□□□□ 0.21
COMMD9-205ENST00000528608 DSG2Q14126 1118 aa16.38■□□□□ 0.21
COMMD9-205ENST00000528608 PCDHGA4Q9Y5G9 962 aa16.37■□□□□ 0.21
COMMD9-205ENST00000528608 NUDT7P0C024 238 aa16.35■□□□□ 0.21
COMMD9-205ENST00000528608 BBXQ8WY36 941 aaPredicted RBP16.35■□□□□ 0.21
COMMD9-205ENST00000528608 CRISPLD2Q9H0B8 497 aa16.34■□□□□ 0.21
COMMD9-205ENST00000528608 ZNF316A6NFI3 1004 aaPredicted RBP16.32■□□□□ 0.2
COMMD9-205ENST00000528608 KRTAP3-3Q9BYR6 98 aa16.31■□□□□ 0.2
COMMD9-205ENST00000528608 KRTAP3-2Q9BYR7 98 aa16.31■□□□□ 0.2
COMMD9-205ENST00000528608 PDE4AP27815 886 aa16.3■□□□□ 0.2
COMMD9-205ENST00000528608 NCKAP5LQ9HCH0 1330 aa16.28■□□□□ 0.2
COMMD9-205ENST00000528608 PPP1R15BQ5SWA1 713 aa16.28■□□□□ 0.2
COMMD9-205ENST00000528608 PTCD2Q8WV60 388 aaKnown RBP16.27■□□□□ 0.2
COMMD9-205ENST00000528608 ZNF687Q8N1G0 1237 aa16.26■□□□□ 0.19
COMMD9-205ENST00000528608 UNC13AQ9UPW8 1703 aa16.25■□□□□ 0.19
COMMD9-205ENST00000528608 SPNS2Q8IVW8 549 aa16.24■□□□□ 0.19
COMMD9-205ENST00000528608 ZBTB4Q9P1Z0 1013 aaPredicted RBP16.24■□□□□ 0.19
COMMD9-205ENST00000528608 TBC1D12O60347 775 aa16.23■□□□□ 0.19
COMMD9-205ENST00000528608 LARP6Q9BRS8 491 aaKnown RBP16.23■□□□□ 0.19
COMMD9-205ENST00000528608 LHX6Q9UPM6 363 aa16.23■□□□□ 0.19
COMMD9-205ENST00000528608 DDX27Q96GQ7 796 aaKnown RBP16.2■□□□□ 0.18
COMMD9-205ENST00000528608 UPF1Q92900 1129 aaKnown RBP eCLIP16.19■□□□□ 0.18
COMMD9-205ENST00000528608 CADPS2Q86UW7 1296 aa16.17■□□□□ 0.18
COMMD9-205ENST00000528608 SPRYD3Q8NCJ5 442 aa16.17■□□□□ 0.18
COMMD9-205ENST00000528608 OXER1Q8TDS5 423 aa16.15■□□□□ 0.18
COMMD9-205ENST00000528608 MMRN1Q13201 1228 aa16.14■□□□□ 0.17
COMMD9-205ENST00000528608 BICRAQ9NZM4 1560 aa16.13■□□□□ 0.17
COMMD9-205ENST00000528608 SCRIBQ14160 1630 aa16.13■□□□□ 0.17
COMMD9-205ENST00000528608 MFSD10Q14728 455 aa16.13■□□□□ 0.17
COMMD9-205ENST00000528608 KDM4FA0A1W2PPD8 638 aa16.12■□□□□ 0.17
COMMD9-205ENST00000528608 PSDA5PKW4 1024 aaPredicted RBP16.12■□□□□ 0.17
COMMD9-205ENST00000528608 CFAP44Q96MT7 982 aa16.1■□□□□ 0.17
COMMD9-205ENST00000528608 PAXIP1Q6ZW49 1069 aaPredicted RBP16.09■□□□□ 0.17
COMMD9-205ENST00000528608 PBX2P40425 430 aa16.07■□□□□ 0.16
COMMD9-205ENST00000528608 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
COMMD9-205ENST00000528608 ANKRD13DQ6ZTN6 518 aa16.03■□□□□ 0.16
COMMD9-205ENST00000528608 LSM11P83369 360 aaKnown RBP eCLIP16.02■□□□□ 0.16
COMMD9-205ENST00000528608 AXIN2Q9Y2T1 843 aa16.02■□□□□ 0.16
COMMD9-205ENST00000528608 MAP3K9P80192 1104 aa16■□□□□ 0.15
COMMD9-205ENST00000528608 POTEEQ6S8J3 1075 aa15.99■□□□□ 0.15
COMMD9-205ENST00000528608 EMILIN3Q9NT22 766 aa15.98■□□□□ 0.15
COMMD9-205ENST00000528608 EVI5O60447 810 aa15.97■□□□□ 0.15
COMMD9-205ENST00000528608 ARHGAP33O14559 1287 aa15.95■□□□□ 0.14
COMMD9-205ENST00000528608 ZNF454Q8N9F8 522 aa15.95■□□□□ 0.14
COMMD9-205ENST00000528608 PTGER2P43116 358 aa15.92■□□□□ 0.14
COMMD9-205ENST00000528608 MYT1LQ9UL68 1186 aa15.92■□□□□ 0.14
COMMD9-205ENST00000528608 RNF166Q96A37 237 aaPredicted RBP15.9■□□□□ 0.14
COMMD9-205ENST00000528608 KCNH8Q96L42 1107 aa15.9■□□□□ 0.14
COMMD9-205ENST00000528608 ANO8Q9HCE9 1232 aaPredicted RBP15.9■□□□□ 0.14
COMMD9-205ENST00000528608 CAMK2BQ13554 666 aa15.89■□□□□ 0.13
COMMD9-205ENST00000528608 PSEN2P49810 448 aa15.88■□□□□ 0.13
COMMD9-205ENST00000528608 FOSBP53539 338 aa15.88■□□□□ 0.13
COMMD9-205ENST00000528608 JPH4Q96JJ6 628 aa15.87■□□□□ 0.13
COMMD9-205ENST00000528608 KCNK17Q96T54 332 aa15.87■□□□□ 0.13
COMMD9-205ENST00000528608 SHROOM4Q9ULL8 1493 aa15.84■□□□□ 0.13
COMMD9-205ENST00000528608 DPYSL4O14531 572 aa15.84■□□□□ 0.13
COMMD9-205ENST00000528608 DMRTA1Q5VZB9 504 aa15.84■□□□□ 0.13
COMMD9-205ENST00000528608 ADGRD1Q6QNK2 874 aa15.83■□□□□ 0.12
COMMD9-205ENST00000528608 BCL2L12Q9HB09 334 aa15.82■□□□□ 0.12
COMMD9-205ENST00000528608 WDR70Q9NW82 654 aa15.82■□□□□ 0.12
COMMD9-205ENST00000528608 ZDHHC16Q969W1 377 aa15.8■□□□□ 0.12
COMMD9-205ENST00000528608 TK2O00142 265 aa15.79■□□□□ 0.12
COMMD9-205ENST00000528608 PTPREP23469 700 aa15.78■□□□□ 0.12
COMMD9-205ENST00000528608 E2F4Q16254 413 aa15.75■□□□□ 0.11
COMMD9-205ENST00000528608 ADAM33Q9BZ11 813 aa15.75■□□□□ 0.11
COMMD9-205ENST00000528608 PCDHGA10Q9Y5H3 936 aa15.74■□□□□ 0.11
Retrieved 100 of 20,778 RNA–protein pairs in 16.4 ms