RNA–Protein interactions for RNA: ENST00000528521.1

CHID1-213, Transcript of chitinase domain containing 1, humanhuman

TSL 5

Gene CHID1, Length 323 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHID1-213ENST00000528521 ADGRL1O94910 1474 aa15.75■□□□□ 0.11
CHID1-213ENST00000528521 ARHGEF40Q8TER5 1519 aa15.74■□□□□ 0.11
CHID1-213ENST00000528521 RAPGEF3O95398 923 aa15.74■□□□□ 0.11
CHID1-213ENST00000528521 ARHGAP5Q13017 1502 aa15.73■□□□□ 0.11
CHID1-213ENST00000528521 POGZQ7Z3K3 1410 aa15.72■□□□□ 0.11
CHID1-213ENST00000528521 VPS8Q8N3P4 1428 aa15.7■□□□□ 0.1
CHID1-213ENST00000528521 ABCC1P33527 1531 aa15.7■□□□□ 0.1
CHID1-213ENST00000528521 EHBP1L1Q8N3D4 1523 aa15.7■□□□□ 0.1
CHID1-213ENST00000528521 SIGLEC1Q9BZZ2 1709 aa15.7■□□□□ 0.1
CHID1-213ENST00000528521 KDM5CP41229 1560 aa15.7■□□□□ 0.1
CHID1-213ENST00000528521 ITSN2Q9NZM3 1697 aa15.7■□□□□ 0.1
CHID1-213ENST00000528521 SCAPERQ9BY12 1400 aa15.69■□□□□ 0.1
CHID1-213ENST00000528521 TIAM1Q13009 1591 aa15.68■□□□□ 0.1
CHID1-213ENST00000528521 GPATCH8Q9UKJ3 1502 aaKnown RBP15.68■□□□□ 0.1
CHID1-213ENST00000528521 MAGI2Q86UL8 1455 aa15.67■□□□□ 0.1
CHID1-213ENST00000528521 EFCAB2Q5VUJ9 269 aa15.67■□□□□ 0.1
CHID1-213ENST00000528521 ZFYVE16Q7Z3T8 1539 aa15.67■□□□□ 0.1
CHID1-213ENST00000528521 ARHGEF12Q9NZN5 1544 aa15.67■□□□□ 0.1
CHID1-213ENST00000528521 SAMD9LQ8IVG5 1584 aa15.66■□□□□ 0.1
CHID1-213ENST00000528521 YEATS2Q9ULM3 1422 aa15.66■□□□□ 0.1
CHID1-213ENST00000528521 ADAMTSL3P82987 1691 aa15.66■□□□□ 0.1
CHID1-213ENST00000528521 BCORL1Q5H9F3 1711 aa15.65■□□□□ 0.1
CHID1-213ENST00000528521 ZNF518AQ6AHZ1 1483 aa15.65■□□□□ 0.1
CHID1-213ENST00000528521 MTUS2Q5JR59 1369 aa15.63■□□□□ 0.09
CHID1-213ENST00000528521 HECW2Q9P2P5 1572 aa15.63■□□□□ 0.09
CHID1-213ENST00000528521 MAP3K1Q13233 1512 aa15.63■□□□□ 0.09
CHID1-213ENST00000528521 SUPT6HQ7KZ85 1726 aaKnown RBP15.62■□□□□ 0.09
CHID1-213ENST00000528521 TRAPPC8Q9Y2L5 1435 aa15.6■□□□□ 0.09
CHID1-213ENST00000528521 SYCP2Q9BX26 1530 aa15.6■□□□□ 0.09
CHID1-213ENST00000528521 DIP2CQ9Y2E4 1556 aa15.6■□□□□ 0.09
CHID1-213ENST00000528521 ABCA6Q8N139 1617 aa15.6■□□□□ 0.09
CHID1-213ENST00000528521 KIDINS220Q9ULH0 1771 aa15.59■□□□□ 0.09
CHID1-213ENST00000528521 LRRC9Q6ZRR7 1453 aa15.59■□□□□ 0.09
CHID1-213ENST00000528521 MLH3Q9UHC1 1453 aa15.59■□□□□ 0.09
CHID1-213ENST00000528521 REREQ9P2R6 1566 aa15.58■□□□□ 0.09
CHID1-213ENST00000528521 MADDQ8WXG6 1647 aa15.58■□□□□ 0.09
CHID1-213ENST00000528521 CCNB3Q8WWL7 1395 aa15.58■□□□□ 0.08
CHID1-213ENST00000528521 NCOA2Q15596 1464 aa15.58■□□□□ 0.08
CHID1-213ENST00000528521 AFAP1Q8N556 730 aa15.56■□□□□ 0.08
CHID1-213ENST00000528521 C9orf84Q5VXU9 1444 aa15.56■□□□□ 0.08
CHID1-213ENST00000528521 KIAA1107Q9UPP5 1409 aa15.56■□□□□ 0.08
CHID1-213ENST00000528521 ATP10AO60312 1499 aa15.56■□□□□ 0.08
CHID1-213ENST00000528521 INO80Q9ULG1 1556 aaPredicted RBP15.55■□□□□ 0.08
CHID1-213ENST00000528521 PLEKHH2Q8IVE3 1493 aa15.54■□□□□ 0.08
CHID1-213ENST00000528521 MBD5Q9P267 1494 aa15.52■□□□□ 0.08
CHID1-213ENST00000528521 RIMS1Q86UR5 1692 aaKnown RBP15.52■□□□□ 0.08
CHID1-213ENST00000528521 PTPRMP28827 1452 aa15.52■□□□□ 0.07
CHID1-213ENST00000528521 CFDP1Q9UEE9 299 aaPredicted RBP15.51■□□□□ 0.07
CHID1-213ENST00000528521 FER1L4A9Z1Z3 1794 aa15.51■□□□□ 0.07
CHID1-213ENST00000528521 AGLP35573 1532 aa15.5■□□□□ 0.07
CHID1-213ENST00000528521 ATP7AQ04656 1500 aa15.5■□□□□ 0.07
CHID1-213ENST00000528521 CAMSAP2Q08AD1 1489 aa15.49■□□□□ 0.07
CHID1-213ENST00000528521 KANK4Q5T7N3 995 aaPredicted RBP15.49■□□□□ 0.07
CHID1-213ENST00000528521 ZNF777Q9ULD5 760 aaPredicted RBP15.48■□□□□ 0.07
CHID1-213ENST00000528521 PLXNC1O60486 1568 aa15.48■□□□□ 0.07
CHID1-213ENST00000528521 ARID4BQ4LE39 1312 aaPredicted RBP15.47■□□□□ 0.07
CHID1-213ENST00000528521 ZNF644Q9H582 1327 aaPredicted RBP15.47■□□□□ 0.07
CHID1-213ENST00000528521 ARHGEF5Q12774 1597 aa15.46■□□□□ 0.07
CHID1-213ENST00000528521 HNRNPMP52272 730 aaKnown RBP eCLIP15.46■□□□□ 0.07
CHID1-213ENST00000528521 ADGBQ8N7X0 1667 aa15.44■□□□□ 0.06
CHID1-213ENST00000528521 MYOM3Q5VTT5 1437 aa15.43■□□□□ 0.06
CHID1-213ENST00000528521 CCDC141Q6ZP82 1450 aa15.43■□□□□ 0.06
CHID1-213ENST00000528521 RTEL1-TNFRSF6BF6WH68 1400 aa15.42■□□□□ 0.06
CHID1-213ENST00000528521 MIA2Q96PC5 1412 aa15.42■□□□□ 0.06
CHID1-213ENST00000528521 SPAG9O60271 1321 aaKnown RBP15.42■□□□□ 0.06
CHID1-213ENST00000528521 MAST1Q9Y2H9 1570 aa15.4■□□□□ 0.06
CHID1-213ENST00000528521 A2MP01023 1474 aa15.39■□□□□ 0.05
CHID1-213ENST00000528521 CROCC2H7BZ55 1655 aa15.38■□□□□ 0.05
CHID1-213ENST00000528521 PTPN23Q9H3S7 1636 aa15.37■□□□□ 0.05
CHID1-213ENST00000528521 MLECQ14165 292 aa15.37■□□□□ 0.05
CHID1-213ENST00000528521 MYT1LQ9UL68 1186 aa15.37■□□□□ 0.05
CHID1-213ENST00000528521 C3P01024 1663 aa15.37■□□□□ 0.05
CHID1-213ENST00000528521 MROH2AA6NES4 1674 aa15.36■□□□□ 0.05
CHID1-213ENST00000528521 LMTK3Q96Q04 1460 aa15.36■□□□□ 0.05
CHID1-213ENST00000528521 TCOF1Q13428 1488 aaKnown RBP15.35■□□□□ 0.05
CHID1-213ENST00000528521 RSPH4AQ5TD94 716 aa15.34■□□□□ 0.05
CHID1-213ENST00000528521 FGD6Q6ZV73 1430 aa15.34■□□□□ 0.05
CHID1-213ENST00000528521 APLP2Q06481 763 aa15.33■□□□□ 0.04
CHID1-213ENST00000528521 DNMT1P26358 1616 aaKnown RBP15.32■□□□□ 0.04
CHID1-213ENST00000528521 PREX1Q8TCU6 1659 aa15.32■□□□□ 0.04
CHID1-213ENST00000528521 SHANK2Q9UPX8 1470 aa15.32■□□□□ 0.04
CHID1-213ENST00000528521 CLTCQ00610 1675 aaKnown RBP15.32■□□□□ 0.04
CHID1-213ENST00000528521 DHX29Q7Z478 1369 aaKnown RBP15.31■□□□□ 0.04
CHID1-213ENST00000528521 CNTLNQ9NXG0 1405 aa15.3■□□□□ 0.04
CHID1-213ENST00000528521 RNF17Q9BXT8 1623 aaKnown RBP15.28■□□□□ 0.04
CHID1-213ENST00000528521 EIF2AK4Q9P2K8 1649 aaKnown RBP15.28■□□□□ 0.04
CHID1-213ENST00000528521 ABCC5O15440 1437 aa15.28■□□□□ 0.04
CHID1-213ENST00000528521 SETD1BQ9UPS6 1966 aaKnown RBP15.28■□□□□ 0.04
CHID1-213ENST00000528521 FAM135AQ9P2D6 1515 aa15.27■□□□□ 0.04
CHID1-213ENST00000528521 DAPK1P53355 1430 aa15.26■□□□□ 0.03
CHID1-213ENST00000528521 MROH1Q8NDA8 1641 aa15.26■□□□□ 0.03
CHID1-213ENST00000528521 CEBPAP49715 358 aaPredicted RBP15.26■□□□□ 0.03
CHID1-213ENST00000528521 TSPY4P0CV99 314 aa15.24■□□□□ 0.03
CHID1-213ENST00000528521 TSPY10P0CW01 314 aa15.24■□□□□ 0.03
CHID1-213ENST00000528521 KDM5DQ9BY66 1539 aa15.23■□□□□ 0.03
CHID1-213ENST00000528521 DUOX2Q9NRD8 1548 aa15.23■□□□□ 0.03
CHID1-213ENST00000528521 PLPPR3Q6T4P5 718 aa15.22■□□□□ 0.03
CHID1-213ENST00000528521 NPATQ14207 1427 aa15.22■□□□□ 0.03
CHID1-213ENST00000528521 ZMYM3Q14202 1370 aa15.22■□□□□ 0.03
CHID1-213ENST00000528521 ZC3H13Q5T200 1668 aaKnown RBP15.22■□□□□ 0.03
Retrieved 100 of 20,778 RNA–protein pairs in 162.2 ms