RNA–Protein interactions for RNA: ENST00000528471.1

CHRDL2-205, Transcript of chordin like 2, humanhuman

TSL 1 (best)

Gene CHRDL2, Length 1,321 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRDL2-205ENST00000528471 BCORL1Q5H9F3 1711 aa22.45■■□□□ 1.18
CHRDL2-205ENST00000528471 PREX2Q70Z35 1606 aa22.45■■□□□ 1.18
CHRDL2-205ENST00000528471 POGZQ7Z3K3 1410 aa22.45■■□□□ 1.18
CHRDL2-205ENST00000528471 SCAPERQ9BY12 1400 aa22.45■■□□□ 1.18
CHRDL2-205ENST00000528471 EFCAB2Q5VUJ9 269 aa22.44■■□□□ 1.18
CHRDL2-205ENST00000528471 ADAMTSL3P82987 1691 aa22.44■■□□□ 1.18
CHRDL2-205ENST00000528471 ARID4BQ4LE39 1312 aaPredicted RBP22.42■■□□□ 1.18
CHRDL2-205ENST00000528471 CDC42BPAQ5VT25 1732 aa22.41■■□□□ 1.18
CHRDL2-205ENST00000528471 MAGI2Q86UL8 1455 aa22.41■■□□□ 1.18
CHRDL2-205ENST00000528471 CEP162Q5TB80 1403 aa22.39■■□□□ 1.18
CHRDL2-205ENST00000528471 MADDQ8WXG6 1647 aa22.38■■□□□ 1.17
CHRDL2-205ENST00000528471 YEATS2Q9ULM3 1422 aa22.37■■□□□ 1.17
CHRDL2-205ENST00000528471 ZNF518AQ6AHZ1 1483 aa22.36■■□□□ 1.17
CHRDL2-205ENST00000528471 HECW2Q9P2P5 1572 aa22.36■■□□□ 1.17
CHRDL2-205ENST00000528471 ITSN2Q9NZM3 1697 aa22.34■■□□□ 1.17
CHRDL2-205ENST00000528471 SIGLEC1Q9BZZ2 1709 aa22.34■■□□□ 1.17
CHRDL2-205ENST00000528471 RIMS1Q86UR5 1692 aaKnown RBP22.33■■□□□ 1.17
CHRDL2-205ENST00000528471 KDM5CP41229 1560 aa22.33■■□□□ 1.16
CHRDL2-205ENST00000528471 ABCC1P33527 1531 aa22.33■■□□□ 1.16
CHRDL2-205ENST00000528471 PTPRMP28827 1452 aa22.32■■□□□ 1.16
CHRDL2-205ENST00000528471 FER1L4A9Z1Z3 1794 aa22.29■■□□□ 1.16
CHRDL2-205ENST00000528471 MTUS2Q5JR59 1369 aa22.29■■□□□ 1.16
CHRDL2-205ENST00000528471 ATP10AO60312 1499 aa22.28■■□□□ 1.16
CHRDL2-205ENST00000528471 C9orf84Q5VXU9 1444 aa22.27■■□□□ 1.16
CHRDL2-205ENST00000528471 EHBP1L1Q8N3D4 1523 aa22.26■■□□□ 1.15
CHRDL2-205ENST00000528471 MYT1LQ9UL68 1186 aa22.26■■□□□ 1.15
CHRDL2-205ENST00000528471 SAMD9LQ8IVG5 1584 aa22.25■■□□□ 1.15
CHRDL2-205ENST00000528471 AFAP1Q8N556 730 aa22.25■■□□□ 1.15
CHRDL2-205ENST00000528471 DIP2CQ9Y2E4 1556 aa22.24■■□□□ 1.15
CHRDL2-205ENST00000528471 GPATCH8Q9UKJ3 1502 aaKnown RBP22.24■■□□□ 1.15
CHRDL2-205ENST00000528471 ABCA6Q8N139 1617 aa22.24■■□□□ 1.15
CHRDL2-205ENST00000528471 ARHGEF12Q9NZN5 1544 aa22.23■■□□□ 1.15
CHRDL2-205ENST00000528471 TRAPPC8Q9Y2L5 1435 aa22.21■■□□□ 1.15
CHRDL2-205ENST00000528471 SYCP2Q9BX26 1530 aa22.21■■□□□ 1.15
CHRDL2-205ENST00000528471 ZNF777Q9ULD5 760 aaPredicted RBP22.21■■□□□ 1.15
CHRDL2-205ENST00000528471 CCNB3Q8WWL7 1395 aa22.21■■□□□ 1.15
CHRDL2-205ENST00000528471 MLH3Q9UHC1 1453 aa22.21■■□□□ 1.15
CHRDL2-205ENST00000528471 MLECQ14165 292 aa22.2■■□□□ 1.14
CHRDL2-205ENST00000528471 LOC105371045A0A1W2PR82 267 aa22.19■■□□□ 1.14
CHRDL2-205ENST00000528471 KIDINS220Q9ULH0 1771 aa22.19■■□□□ 1.14
CHRDL2-205ENST00000528471 TIAM1Q13009 1591 aa22.19■■□□□ 1.14
CHRDL2-205ENST00000528471 REREQ9P2R6 1566 aa22.19■■□□□ 1.14
CHRDL2-205ENST00000528471 SUPT6HQ7KZ85 1726 aaKnown RBP22.17■■□□□ 1.14
CHRDL2-205ENST00000528471 PLEKHH2Q8IVE3 1493 aa22.17■■□□□ 1.14
CHRDL2-205ENST00000528471 CFDP1Q9UEE9 299 aaPredicted RBP22.16■■□□□ 1.14
CHRDL2-205ENST00000528471 VPS8Q8N3P4 1428 aa22.14■■□□□ 1.14
CHRDL2-205ENST00000528471 PLPPR3Q6T4P5 718 aa22.13■■□□□ 1.13
CHRDL2-205ENST00000528471 KIAA1107Q9UPP5 1409 aa22.11■■□□□ 1.13
CHRDL2-205ENST00000528471 ATP7AQ04656 1500 aa22.09■■□□□ 1.13
CHRDL2-205ENST00000528471 INO80Q9ULG1 1556 aaPredicted RBP22.09■■□□□ 1.13
CHRDL2-205ENST00000528471 AGLP35573 1532 aa22.08■■□□□ 1.13
CHRDL2-205ENST00000528471 HNRNPMP52272 730 aaKnown RBP eCLIP22.08■■□□□ 1.13
CHRDL2-205ENST00000528471 NCOA2Q15596 1464 aa22.08■■□□□ 1.12
CHRDL2-205ENST00000528471 LMTK3Q96Q04 1460 aa22.08■■□□□ 1.12
CHRDL2-205ENST00000528471 SPAG9O60271 1321 aaKnown RBP22.07■■□□□ 1.12
CHRDL2-205ENST00000528471 PREX1Q8TCU6 1659 aa22.04■■□□□ 1.12
CHRDL2-205ENST00000528471 ADGBQ8N7X0 1667 aa22.03■■□□□ 1.12
CHRDL2-205ENST00000528471 LRRC9Q6ZRR7 1453 aa22.02■■□□□ 1.12
CHRDL2-205ENST00000528471 C3P01024 1663 aa22.01■■□□□ 1.11
CHRDL2-205ENST00000528471 ZNF644Q9H582 1327 aaPredicted RBP22■■□□□ 1.11
CHRDL2-205ENST00000528471 ESF1Q9H501 851 aaKnown RBP22■■□□□ 1.11
CHRDL2-205ENST00000528471 MAP3K1Q13233 1512 aa22■■□□□ 1.11
CHRDL2-205ENST00000528471 CAMSAP2Q08AD1 1489 aa21.99■■□□□ 1.11
CHRDL2-205ENST00000528471 PLXNC1O60486 1568 aa21.99■■□□□ 1.11
CHRDL2-205ENST00000528471 SETD1BQ9UPS6 1966 aaKnown RBP21.98■■□□□ 1.11
CHRDL2-205ENST00000528471 A2MP01023 1474 aa21.98■■□□□ 1.11
CHRDL2-205ENST00000528471 MBD5Q9P267 1494 aa21.98■■□□□ 1.11
CHRDL2-205ENST00000528471 CCDC141Q6ZP82 1450 aa21.96■■□□□ 1.11
CHRDL2-205ENST00000528471 MROH2AA6NES4 1674 aa21.95■■□□□ 1.1
CHRDL2-205ENST00000528471 CEBPAP49715 358 aaPredicted RBP21.95■■□□□ 1.1
CHRDL2-205ENST00000528471 CNTLNQ9NXG0 1405 aa21.95■■□□□ 1.1
CHRDL2-205ENST00000528471 CLTCQ00610 1675 aaKnown RBP21.92■■□□□ 1.1
CHRDL2-205ENST00000528471 HSPA2P54652 639 aa21.92■■□□□ 1.1
CHRDL2-205ENST00000528471 ARHGEF5Q12774 1597 aa21.91■■□□□ 1.1
CHRDL2-205ENST00000528471 RTEL1-TNFRSF6BF6WH68 1400 aa21.91■■□□□ 1.1
CHRDL2-205ENST00000528471 UHRF1BP1Q6BDS2 1440 aa21.89■■□□□ 1.1
CHRDL2-205ENST00000528471 APLP2Q06481 763 aa21.88■■□□□ 1.09
CHRDL2-205ENST00000528471 KANK4Q5T7N3 995 aaPredicted RBP21.88■■□□□ 1.09
CHRDL2-205ENST00000528471 RSPH4AQ5TD94 716 aa21.86■■□□□ 1.09
CHRDL2-205ENST00000528471 MYOM3Q5VTT5 1437 aa21.85■■□□□ 1.09
CHRDL2-205ENST00000528471 MIA2Q96PC5 1412 aa21.83■■□□□ 1.08
CHRDL2-205ENST00000528471 GGT6Q6P531 493 aa21.82■■□□□ 1.08
CHRDL2-205ENST00000528471 DHX29Q7Z478 1369 aaKnown RBP21.82■■□□□ 1.08
CHRDL2-205ENST00000528471 TSPY4P0CV99 314 aa21.8■■□□□ 1.08
CHRDL2-205ENST00000528471 TSPY10P0CW01 314 aa21.8■■□□□ 1.08
CHRDL2-205ENST00000528471 ILDR1Q86SU0 546 aaPredicted RBP21.8■■□□□ 1.08
CHRDL2-205ENST00000528471 MAST1Q9Y2H9 1570 aa21.8■■□□□ 1.08
CHRDL2-205ENST00000528471 NPATQ14207 1427 aa21.8■■□□□ 1.08
CHRDL2-205ENST00000528471 ZMYM3Q14202 1370 aa21.8■■□□□ 1.08
CHRDL2-205ENST00000528471 STRCQ7RTU9 1775 aa21.79■■□□□ 1.08
CHRDL2-205ENST00000528471 CROCC2H7BZ55 1655 aa21.77■■□□□ 1.08
CHRDL2-205ENST00000528471 MYO3AQ8NEV4 1616 aa21.77■■□□□ 1.08
CHRDL2-205ENST00000528471 PTPN23Q9H3S7 1636 aa21.77■■□□□ 1.08
CHRDL2-205ENST00000528471 PPP6R1Q9UPN7 881 aa21.76■■□□□ 1.07
CHRDL2-205ENST00000528471 KIF3BO15066 747 aa21.75■■□□□ 1.07
CHRDL2-205ENST00000528471 FAM135AQ9P2D6 1515 aa21.75■■□□□ 1.07
CHRDL2-205ENST00000528471 ZNF142P52746 1687 aaPredicted RBP21.74■■□□□ 1.07
CHRDL2-205ENST00000528471 KDM5DQ9BY66 1539 aa21.74■■□□□ 1.07
CHRDL2-205ENST00000528471 EIF2AK4Q9P2K8 1649 aaKnown RBP21.72■■□□□ 1.07
CHRDL2-205ENST00000528471 RNF17Q9BXT8 1623 aaKnown RBP21.71■■□□□ 1.07
Retrieved 100 of 20,778 RNA–protein pairs in 25 ms