RNA–Protein interactions for RNA: ENST00000528227.5

TRIM3-206, Transcript of tripartite motif containing 3, humanhuman

TSL 5

Gene TRIM3, Length 1,117 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM3-206ENST00000528227 MAGI2Q86UL8 1455 aa42.38■■■■■ 4.38
TRIM3-206ENST00000528227 POGZQ7Z3K3 1410 aa42.37■■■■■ 4.37
TRIM3-206ENST00000528227 YEATS2Q9ULM3 1422 aa42.37■■■■■ 4.37
TRIM3-206ENST00000528227 CLIP1P30622 1438 aa42.33■■■■■ 4.37
TRIM3-206ENST00000528227 EFCAB2Q5VUJ9 269 aa42.33■■■■■ 4.37
TRIM3-206ENST00000528227 PCF11O94913 1555 aaKnown RBP42.31■■■■■ 4.36
TRIM3-206ENST00000528227 CASKIN1Q8WXD9 1431 aa42.3■■■■■ 4.36
TRIM3-206ENST00000528227 SIGLEC1Q9BZZ2 1709 aa42.3■■■■■ 4.36
TRIM3-206ENST00000528227 RIMS1Q86UR5 1692 aaKnown RBP42.25■■■■■ 4.35
TRIM3-206ENST00000528227 CCDC18Q5T9S5 1454 aa42.25■■■■■ 4.35
TRIM3-206ENST00000528227 ARHGAP5Q13017 1502 aa42.23■■■■■ 4.35
TRIM3-206ENST00000528227 ILDR1Q86SU0 546 aaPredicted RBP42.17■■■■■ 4.34
TRIM3-206ENST00000528227 CDC42BPBQ9Y5S2 1711 aa42.15■■■■■ 4.34
TRIM3-206ENST00000528227 ZNF518AQ6AHZ1 1483 aa42.15■■■■■ 4.34
TRIM3-206ENST00000528227 ATP10AO60312 1499 aa42.14■■■■■ 4.34
TRIM3-206ENST00000528227 FYCO1Q9BQS8 1478 aa42.14■■■■■ 4.34
TRIM3-206ENST00000528227 KDM5CP41229 1560 aa42.11■■■■■ 4.33
TRIM3-206ENST00000528227 PREX2Q70Z35 1606 aa42.1■■■■■ 4.33
TRIM3-206ENST00000528227 C9orf84Q5VXU9 1444 aa42.1■■■■■ 4.33
TRIM3-206ENST00000528227 LMTK3Q96Q04 1460 aa42.07■■■■■ 4.33
TRIM3-206ENST00000528227 MLECQ14165 292 aa42.06■■■■■ 4.32
TRIM3-206ENST00000528227 AFAP1Q8N556 730 aa42.06■■■■■ 4.32
TRIM3-206ENST00000528227 FER1L4A9Z1Z3 1794 aa42.04■■■■■ 4.32
TRIM3-206ENST00000528227 ARHGEF12Q9NZN5 1544 aa42■■■■■ 4.31
TRIM3-206ENST00000528227 ABCC1P33527 1531 aa41.99■■■■■ 4.31
TRIM3-206ENST00000528227 CDC42BPAQ5VT25 1732 aa41.98■■■■■ 4.31
TRIM3-206ENST00000528227 PLPPR3Q6T4P5 718 aa41.95■■■■■ 4.31
TRIM3-206ENST00000528227 DIP2CQ9Y2E4 1556 aa41.95■■■■■ 4.31
TRIM3-206ENST00000528227 ITSN2Q9NZM3 1697 aa41.94■■■■■ 4.3
TRIM3-206ENST00000528227 MLH3Q9UHC1 1453 aa41.92■■■■■ 4.3
TRIM3-206ENST00000528227 TRAPPC8Q9Y2L5 1435 aa41.92■■■■■ 4.3
TRIM3-206ENST00000528227 MYT1LQ9UL68 1186 aa41.9■■■■■ 4.3
TRIM3-206ENST00000528227 REREQ9P2R6 1566 aa41.89■■■■■ 4.3
TRIM3-206ENST00000528227 ABCA6Q8N139 1617 aa41.89■■■■■ 4.3
TRIM3-206ENST00000528227 GPATCH8Q9UKJ3 1502 aaKnown RBP41.81■■■■■ 4.28
TRIM3-206ENST00000528227 SAMD9LQ8IVG5 1584 aa41.8■■■■■ 4.28
TRIM3-206ENST00000528227 HSPA2P54652 639 aa41.79■■■■■ 4.28
TRIM3-206ENST00000528227 KIDINS220Q9ULH0 1771 aa41.78■■■■■ 4.28
TRIM3-206ENST00000528227 AGLP35573 1532 aa41.74■■■■■ 4.27
TRIM3-206ENST00000528227 ZNF777Q9ULD5 760 aaPredicted RBP41.74■■■■■ 4.27
TRIM3-206ENST00000528227 SYCP2Q9BX26 1530 aa41.72■■■■■ 4.27
TRIM3-206ENST00000528227 CEBPAP49715 358 aaPredicted RBP41.7■■■■■ 4.27
TRIM3-206ENST00000528227 PREX1Q8TCU6 1659 aa41.69■■■■■ 4.26
TRIM3-206ENST00000528227 MTUS2Q5JR59 1369 aa41.69■■■■■ 4.26
TRIM3-206ENST00000528227 CCNB3Q8WWL7 1395 aa41.66■■■■■ 4.26
TRIM3-206ENST00000528227 CEP162Q5TB80 1403 aa41.66■■■■■ 4.26
TRIM3-206ENST00000528227 CFDP1Q9UEE9 299 aaPredicted RBP41.63■■■■■ 4.25
TRIM3-206ENST00000528227 KIAA1107Q9UPP5 1409 aa41.62■■■■■ 4.25
TRIM3-206ENST00000528227 HNRNPMP52272 730 aaKnown RBP eCLIP41.62■■■■■ 4.25
TRIM3-206ENST00000528227 PLEKHH2Q8IVE3 1493 aa41.61■■■■■ 4.25
TRIM3-206ENST00000528227 FBXO41Q8TF61 875 aa41.6■■■■■ 4.25
TRIM3-206ENST00000528227 EHBP1L1Q8N3D4 1523 aa41.59■■■■■ 4.25
TRIM3-206ENST00000528227 SPAG9O60271 1321 aaKnown RBP41.58■■■■■ 4.25
TRIM3-206ENST00000528227 C3P01024 1663 aa41.57■■■■■ 4.25
TRIM3-206ENST00000528227 TIAM1Q13009 1591 aa41.55■■■■■ 4.24
TRIM3-206ENST00000528227 ATP7AQ04656 1500 aa41.54■■■■■ 4.24
TRIM3-206ENST00000528227 INO80Q9ULG1 1556 aaPredicted RBP41.52■■■■■ 4.24
TRIM3-206ENST00000528227 ESF1Q9H501 851 aaKnown RBP41.52■■■■■ 4.24
TRIM3-206ENST00000528227 UHRF1BP1Q6BDS2 1440 aa41.51■■■■■ 4.24
TRIM3-206ENST00000528227 SETD1BQ9UPS6 1966 aaKnown RBP41.5■■■■■ 4.23
TRIM3-206ENST00000528227 CNTLNQ9NXG0 1405 aa41.47■■■■■ 4.23
TRIM3-206ENST00000528227 SUPT6HQ7KZ85 1726 aaKnown RBP41.45■■■■■ 4.23
TRIM3-206ENST00000528227 PLXNC1O60486 1568 aa41.44■■■■■ 4.22
TRIM3-206ENST00000528227 ZNF644Q9H582 1327 aaPredicted RBP41.42■■■■■ 4.22
TRIM3-206ENST00000528227 A2MP01023 1474 aa41.4■■■■■ 4.22
TRIM3-206ENST00000528227 MROH2AA6NES4 1674 aa41.39■■■■■ 4.22
TRIM3-206ENST00000528227 STRCQ7RTU9 1775 aa41.38■■■■■ 4.22
TRIM3-206ENST00000528227 MBD5Q9P267 1494 aa41.38■■■■■ 4.21
TRIM3-206ENST00000528227 ADGBQ8N7X0 1667 aa41.33■■■■■ 4.21
TRIM3-206ENST00000528227 NCOA2Q15596 1464 aa41.32■■■■■ 4.2
TRIM3-206ENST00000528227 ZMYM3Q14202 1370 aa41.28■■■■■ 4.2
TRIM3-206ENST00000528227 DMRT2Q9Y5R5 561 aa41.27■■■■■ 4.2
TRIM3-206ENST00000528227 RTEL1-TNFRSF6BF6WH68 1400 aa41.27■■■■■ 4.2
TRIM3-206ENST00000528227 NPATQ14207 1427 aa41.27■■■■■ 4.2
TRIM3-206ENST00000528227 CLTCQ00610 1675 aaKnown RBP41.26■■■■■ 4.2
TRIM3-206ENST00000528227 LOC105371045A0A1W2PR82 267 aa41.26■■■■■ 4.2
TRIM3-206ENST00000528227 CERKQ8TCT0 537 aa41.25■■■■■ 4.19
TRIM3-206ENST00000528227 VPS8Q8N3P4 1428 aa41.24■■■■■ 4.19
TRIM3-206ENST00000528227 CAMSAP2Q08AD1 1489 aa41.21■■■■■ 4.19
TRIM3-206ENST00000528227 GGT6Q6P531 493 aa41.2■■■■■ 4.19
TRIM3-206ENST00000528227 CCDC141Q6ZP82 1450 aa41.18■■■■■ 4.18
TRIM3-206ENST00000528227 PTPRTO14522 1441 aa41.15■■■■■ 4.18
TRIM3-206ENST00000528227 PPP6R1Q9UPN7 881 aa41.14■■■■■ 4.18
TRIM3-206ENST00000528227 LRRC9Q6ZRR7 1453 aa41.14■■■■■ 4.18
TRIM3-206ENST00000528227 DHX29Q7Z478 1369 aaKnown RBP41.13■■■■■ 4.18
TRIM3-206ENST00000528227 NCOA1Q15788 1441 aa41.11■■■■■ 4.17
TRIM3-206ENST00000528227 RSPH4AQ5TD94 716 aa41.11■■■■■ 4.17
TRIM3-206ENST00000528227 PTPRKQ15262 1439 aa41.1■■■■■ 4.17
TRIM3-206ENST00000528227 ARHGEF5Q12774 1597 aa41.08■■■■■ 4.17
TRIM3-206ENST00000528227 MYO3AQ8NEV4 1616 aa41.07■■■■■ 4.16
TRIM3-206ENST00000528227 CAMSAP1Q5T5Y3 1602 aa41.06■■■■■ 4.16
TRIM3-206ENST00000528227 ZNF142P52746 1687 aaPredicted RBP41.04■■■■■ 4.16
TRIM3-206ENST00000528227 MAP3K1Q13233 1512 aa41.04■■■■■ 4.16
TRIM3-206ENST00000528227 KIF3BO15066 747 aa40.98■■■■■ 4.15
TRIM3-206ENST00000528227 CEP170BQ9Y4F5 1589 aaPredicted RBP40.98■■■■■ 4.15
TRIM3-206ENST00000528227 KANK4Q5T7N3 995 aaPredicted RBP40.97■■■■■ 4.15
TRIM3-206ENST00000528227 FAM135AQ9P2D6 1515 aa40.93■■■■■ 4.14
TRIM3-206ENST00000528227 TSPY4P0CV99 314 aa40.93■■■■■ 4.14
TRIM3-206ENST00000528227 TSPY10P0CW01 314 aa40.93■■■■■ 4.14
TRIM3-206ENST00000528227 KDM5DQ9BY66 1539 aa40.92■■■■■ 4.14
Retrieved 100 of 20,778 RNA–protein pairs in 16.2 ms