RNA–Protein interactions for RNA: ENST00000527599.1

CTNND1-217, Transcript of catenin delta 1, humanhuman

TSL 2

Gene CTNND1, Length 572 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTNND1-217ENST00000527599 SNPHO15079 494 aa20.77■□□□□ 0.92
CTNND1-217ENST00000527599 ST18O60284 1047 aa20.77■□□□□ 0.92
CTNND1-217ENST00000527599 ZBTB4Q9P1Z0 1013 aaPredicted RBP20.76■□□□□ 0.91
CTNND1-217ENST00000527599 SPRYD3Q8NCJ5 442 aa20.73■□□□□ 0.91
CTNND1-217ENST00000527599 TMC2Q8TDI7 906 aa20.71■□□□□ 0.91
CTNND1-217ENST00000527599 PAXIP1Q6ZW49 1069 aaPredicted RBP20.7■□□□□ 0.9
CTNND1-217ENST00000527599 CADPS2Q86UW7 1296 aa20.67■□□□□ 0.9
CTNND1-217ENST00000527599 CFAP44Q96MT7 982 aa20.66■□□□□ 0.9
CTNND1-217ENST00000527599 GPHNQ9NQX3 736 aaPredicted RBP20.66■□□□□ 0.9
CTNND1-217ENST00000527599 NCKAP5LQ9HCH0 1330 aa20.65■□□□□ 0.9
CTNND1-217ENST00000527599 CRISPLD2Q9H0B8 497 aa20.64■□□□□ 0.89
CTNND1-217ENST00000527599 DOK7Q18PE1 504 aa20.61■□□□□ 0.89
CTNND1-217ENST00000527599 DSG2Q14126 1118 aa20.59■□□□□ 0.89
CTNND1-217ENST00000527599 POTEMA6NI47 508 aa20.58■□□□□ 0.89
CTNND1-217ENST00000527599 FOXK1P85037 733 aa20.58■□□□□ 0.89
CTNND1-217ENST00000527599 POTEGQ6S5H5 508 aa20.58■□□□□ 0.89
CTNND1-217ENST00000527599 PLPP6Q8IY26 295 aa20.53■□□□□ 0.88
CTNND1-217ENST00000527599 MARVELD3Q96A59 401 aa20.53■□□□□ 0.88
CTNND1-217ENST00000527599 ZNF710Q8N1W2 664 aa20.52■□□□□ 0.88
CTNND1-217ENST00000527599 PDE4AP27815 886 aa20.5■□□□□ 0.87
CTNND1-217ENST00000527599 GPR153Q6NV75 609 aa20.49■□□□□ 0.87
CTNND1-217ENST00000527599 HOXB1P14653 301 aaPredicted RBP20.48■□□□□ 0.87
CTNND1-217ENST00000527599 LARP6Q9BRS8 491 aaKnown RBP20.47■□□□□ 0.87
CTNND1-217ENST00000527599 RIMBP2O15034 1052 aa20.45■□□□□ 0.86
CTNND1-217ENST00000527599 SLC34A2O95436 690 aa20.45■□□□□ 0.86
CTNND1-217ENST00000527599 ZSWIM6Q9HCJ5 1215 aa20.45■□□□□ 0.86
CTNND1-217ENST00000527599 PPP1R15BQ5SWA1 713 aa20.44■□□□□ 0.86
CTNND1-217ENST00000527599 ARSIQ5FYB1 569 aa20.43■□□□□ 0.86
CTNND1-217ENST00000527599 KHSRPQ92945 711 aaKnown RBP eCLIP20.43■□□□□ 0.86
CTNND1-217ENST00000527599 MFSD10Q14728 455 aa20.42■□□□□ 0.86
CTNND1-217ENST00000527599 EMP3P54852 163 aa20.39■□□□□ 0.85
CTNND1-217ENST00000527599 DDX27Q96GQ7 796 aaKnown RBP20.38■□□□□ 0.85
CTNND1-217ENST00000527599 PCDHGA4Q9Y5G9 962 aa20.37■□□□□ 0.85
CTNND1-217ENST00000527599 POTEB3A0JP26 581 aa20.35■□□□□ 0.85
CTNND1-217ENST00000527599 POTEBQ6S5H4 581 aa20.35■□□□□ 0.85
CTNND1-217ENST00000527599 PTCD2Q8WV60 388 aaKnown RBP20.34■□□□□ 0.85
CTNND1-217ENST00000527599 TSHZ2Q9NRE2 1034 aa20.34■□□□□ 0.85
CTNND1-217ENST00000527599 FAM205CA6NFA0 338 aa20.29■□□□□ 0.84
CTNND1-217ENST00000527599 PLCB2Q00722 1185 aa20.29■□□□□ 0.84
CTNND1-217ENST00000527599 NUDT7P0C024 238 aa20.27■□□□□ 0.84
CTNND1-217ENST00000527599 OXER1Q8TDS5 423 aa20.27■□□□□ 0.84
CTNND1-217ENST00000527599 KDM4FA0A1W2PPD8 638 aa20.25■□□□□ 0.83
CTNND1-217ENST00000527599 HS3ST6Q96QI5 342 aa20.25■□□□□ 0.83
CTNND1-217ENST00000527599 UPF1Q92900 1129 aaKnown RBP eCLIP20.24■□□□□ 0.83
CTNND1-217ENST00000527599 EMILIN3Q9NT22 766 aa20.22■□□□□ 0.83
CTNND1-217ENST00000527599 ERBB3P21860 1342 aa20.21■□□□□ 0.83
CTNND1-217ENST00000527599 CDAN1Q8IWY9 1227 aa20.2■□□□□ 0.82
CTNND1-217ENST00000527599 CAMK2BQ13554 666 aa20.17■□□□□ 0.82
CTNND1-217ENST00000527599 VARS2Q5ST30 1063 aaKnown RBP20.17■□□□□ 0.82
CTNND1-217ENST00000527599 ZNF316A6NFI3 1004 aaPredicted RBP20.16■□□□□ 0.82
CTNND1-217ENST00000527599 LHX6Q9UPM6 363 aa20.15■□□□□ 0.82
CTNND1-217ENST00000527599 TBC1D12O60347 775 aa20.13■□□□□ 0.81
CTNND1-217ENST00000527599 PCDH10Q9P2E7 1040 aa20.11■□□□□ 0.81
CTNND1-217ENST00000527599 WDR70Q9NW82 654 aa20.03■□□□□ 0.8
CTNND1-217ENST00000527599 MAP3K9P80192 1104 aa20.02■□□□□ 0.8
CTNND1-217ENST00000527599 KRTAP3-3Q9BYR6 98 aa20.01■□□□□ 0.79
CTNND1-217ENST00000527599 KRTAP3-2Q9BYR7 98 aa20.01■□□□□ 0.79
CTNND1-217ENST00000527599 EVI5O60447 810 aa20■□□□□ 0.79
CTNND1-217ENST00000527599 E2F4Q16254 413 aa20■□□□□ 0.79
CTNND1-217ENST00000527599 ZNF687Q8N1G0 1237 aa20■□□□□ 0.79
CTNND1-217ENST00000527599 ANO8Q9HCE9 1232 aaPredicted RBP19.99■□□□□ 0.79
CTNND1-217ENST00000527599 DPYSL4O14531 572 aa19.98■□□□□ 0.79
CTNND1-217ENST00000527599 HAP1P54257 671 aaPredicted RBP19.95■□□□□ 0.78
CTNND1-217ENST00000527599 POTEEQ6S8J3 1075 aa19.91■□□□□ 0.78
CTNND1-217ENST00000527599 PSDA5PKW4 1024 aaPredicted RBP19.86■□□□□ 0.77
CTNND1-217ENST00000527599 ARIH1Q9Y4X5 557 aaPredicted RBP19.86■□□□□ 0.77
CTNND1-217ENST00000527599 FOSBP53539 338 aa19.84■□□□□ 0.77
CTNND1-217ENST00000527599 ZNF454Q8N9F8 522 aa19.83■□□□□ 0.77
CTNND1-217ENST00000527599 KDM2AQ9Y2K7 1162 aa19.82■□□□□ 0.76
CTNND1-217ENST00000527599 PPP4R3BQ5MIZ7 849 aa19.81■□□□□ 0.76
CTNND1-217ENST00000527599 AXIN2Q9Y2T1 843 aa19.81■□□□□ 0.76
CTNND1-217ENST00000527599 KCNV2Q8TDN2 545 aa19.8■□□□□ 0.76
CTNND1-217ENST00000527599 PDIA6Q15084 440 aa19.79■□□□□ 0.76
CTNND1-217ENST00000527599 JPH4Q96JJ6 628 aa19.79■□□□□ 0.76
CTNND1-217ENST00000527599 PCDHGA10Q9Y5H3 936 aa19.76■□□□□ 0.75
CTNND1-217ENST00000527599 PBX2P40425 430 aa19.74■□□□□ 0.75
CTNND1-217ENST00000527599 SPDYE16A6NNV3 312 aaPredicted RBP19.72■□□□□ 0.75
CTNND1-217ENST00000527599 PTGER2P43116 358 aa19.72■□□□□ 0.75
CTNND1-217ENST00000527599 PSEN2P49810 448 aa19.71■□□□□ 0.75
CTNND1-217ENST00000527599 SPNS2Q8IVW8 549 aa19.71■□□□□ 0.75
CTNND1-217ENST00000527599 ARHGAP33O14559 1287 aa19.7■□□□□ 0.74
CTNND1-217ENST00000527599 ADAM33Q9BZ11 813 aa19.7■□□□□ 0.74
CTNND1-217ENST00000527599 LSM11P83369 360 aaKnown RBP eCLIP19.69■□□□□ 0.74
CTNND1-217ENST00000527599 DDX12PQ92771 950 aa19.69■□□□□ 0.74
CTNND1-217ENST00000527599 ZDHHC16Q969W1 377 aa19.69■□□□□ 0.74
CTNND1-217ENST00000527599 PLSCR2Q9NRY7 297 aa19.69■□□□□ 0.74
CTNND1-217ENST00000527599 ARHGEF1Q92888 912 aaKnown RBP19.68■□□□□ 0.74
CTNND1-217ENST00000527599 BCL2L12Q9HB09 334 aa19.68■□□□□ 0.74
CTNND1-217ENST00000527599 PHF14O94880 888 aa19.67■□□□□ 0.74
CTNND1-217ENST00000527599 DMRTA1Q5VZB9 504 aa19.66■□□□□ 0.74
CTNND1-217ENST00000527599 ANKRD13DQ6ZTN6 518 aa19.64■□□□□ 0.73
CTNND1-217ENST00000527599 KCNK17Q96T54 332 aa19.64■□□□□ 0.73
CTNND1-217ENST00000527599 TYW1BQ6NUM6 668 aa19.62■□□□□ 0.73
CTNND1-217ENST00000527599 VSIG10Q8N0Z9 540 aa19.62■□□□□ 0.73
CTNND1-217ENST00000527599 EPAS1Q99814 870 aa19.58■□□□□ 0.72
CTNND1-217ENST00000527599 PRIM1P49642 420 aaKnown RBP19.57■□□□□ 0.72
CTNND1-217ENST00000527599 P3H3Q8IVL6 736 aa19.57■□□□□ 0.72
CTNND1-217ENST00000527599 FBXW7Q969H0 707 aa19.56■□□□□ 0.72
CTNND1-217ENST00000527599 PTPREP23469 700 aa19.55■□□□□ 0.72
CTNND1-217ENST00000527599 GRXCR2A6NFK2 248 aa19.54■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 58.6 ms