RNA–Protein interactions for RNA: ENST00000527421.5

UBXN1-208, Transcript of UBX domain protein 1, humanhuman

TSL 5

Gene UBXN1, Length 1,085 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-208ENST00000527421 CDC42BPBQ9Y5S2 1711 aa29.82■■■□□ 2.36
UBXN1-208ENST00000527421 ZMYM4Q5VZL5 1548 aa29.79■■■□□ 2.36
UBXN1-208ENST00000527421 CDC42BPAQ5VT25 1732 aa29.79■■■□□ 2.36
UBXN1-208ENST00000527421 SCAPERQ9BY12 1400 aa29.79■■■□□ 2.36
UBXN1-208ENST00000527421 ILDR1Q86SU0 546 aaPredicted RBP29.78■■■□□ 2.36
UBXN1-208ENST00000527421 POGZQ7Z3K3 1410 aa29.78■■■□□ 2.36
UBXN1-208ENST00000527421 ARHGEF40Q8TER5 1519 aa29.77■■■□□ 2.36
UBXN1-208ENST00000527421 VPS8Q8N3P4 1428 aa29.77■■■□□ 2.36
UBXN1-208ENST00000527421 MTUS2Q5JR59 1369 aa29.77■■■□□ 2.36
UBXN1-208ENST00000527421 EHBP1L1Q8N3D4 1523 aa29.76■■■□□ 2.35
UBXN1-208ENST00000527421 ZFYVE16Q7Z3T8 1539 aa29.7■■■□□ 2.34
UBXN1-208ENST00000527421 MAGI2Q86UL8 1455 aa29.69■■■□□ 2.34
UBXN1-208ENST00000527421 ABCC1P33527 1531 aa29.68■■■□□ 2.34
UBXN1-208ENST00000527421 TIAM1Q13009 1591 aa29.68■■■□□ 2.34
UBXN1-208ENST00000527421 ZNF518AQ6AHZ1 1483 aa29.68■■■□□ 2.34
UBXN1-208ENST00000527421 GPATCH8Q9UKJ3 1502 aaKnown RBP29.66■■■□□ 2.34
UBXN1-208ENST00000527421 ITSN2Q9NZM3 1697 aa29.65■■■□□ 2.34
UBXN1-208ENST00000527421 KDM5CP41229 1560 aa29.64■■■□□ 2.33
UBXN1-208ENST00000527421 CCNB3Q8WWL7 1395 aa29.64■■■□□ 2.33
UBXN1-208ENST00000527421 YEATS2Q9ULM3 1422 aa29.63■■■□□ 2.33
UBXN1-208ENST00000527421 HECW2Q9P2P5 1572 aa29.61■■■□□ 2.33
UBXN1-208ENST00000527421 SAMD9LQ8IVG5 1584 aa29.6■■■□□ 2.33
UBXN1-208ENST00000527421 SUPT6HQ7KZ85 1726 aaKnown RBP29.59■■■□□ 2.33
UBXN1-208ENST00000527421 ARHGEF12Q9NZN5 1544 aa29.57■■■□□ 2.32
UBXN1-208ENST00000527421 BCORL1Q5H9F3 1711 aa29.57■■■□□ 2.32
UBXN1-208ENST00000527421 ARID4BQ4LE39 1312 aaPredicted RBP29.56■■■□□ 2.32
UBXN1-208ENST00000527421 AFAP1Q8N556 730 aa29.55■■■□□ 2.32
UBXN1-208ENST00000527421 CFDP1Q9UEE9 299 aaPredicted RBP29.55■■■□□ 2.32
UBXN1-208ENST00000527421 ZNF777Q9ULD5 760 aaPredicted RBP29.55■■■□□ 2.32
UBXN1-208ENST00000527421 ADAMTSL3P82987 1691 aa29.55■■■□□ 2.32
UBXN1-208ENST00000527421 TRAPPC8Q9Y2L5 1435 aa29.54■■■□□ 2.32
UBXN1-208ENST00000527421 MAP3K1Q13233 1512 aa29.54■■■□□ 2.32
UBXN1-208ENST00000527421 SYCP2Q9BX26 1530 aa29.54■■■□□ 2.32
UBXN1-208ENST00000527421 NCOA2Q15596 1464 aa29.53■■■□□ 2.32
UBXN1-208ENST00000527421 LRRC9Q6ZRR7 1453 aa29.52■■■□□ 2.32
UBXN1-208ENST00000527421 PLEKHH2Q8IVE3 1493 aa29.52■■■□□ 2.32
UBXN1-208ENST00000527421 SIGLEC1Q9BZZ2 1709 aa29.51■■■□□ 2.32
UBXN1-208ENST00000527421 C9orf84Q5VXU9 1444 aa29.51■■■□□ 2.31
UBXN1-208ENST00000527421 ATP10AO60312 1499 aa29.5■■■□□ 2.31
UBXN1-208ENST00000527421 MLH3Q9UHC1 1453 aa29.49■■■□□ 2.31
UBXN1-208ENST00000527421 MYT1LQ9UL68 1186 aa29.48■■■□□ 2.31
UBXN1-208ENST00000527421 DIP2CQ9Y2E4 1556 aa29.47■■■□□ 2.31
UBXN1-208ENST00000527421 KIAA1107Q9UPP5 1409 aa29.47■■■□□ 2.31
UBXN1-208ENST00000527421 ABCA6Q8N139 1617 aa29.46■■■□□ 2.31
UBXN1-208ENST00000527421 MADDQ8WXG6 1647 aa29.46■■■□□ 2.31
UBXN1-208ENST00000527421 KIDINS220Q9ULH0 1771 aa29.43■■■□□ 2.3
UBXN1-208ENST00000527421 REREQ9P2R6 1566 aa29.42■■■□□ 2.3
UBXN1-208ENST00000527421 HNRNPMP52272 730 aaKnown RBP eCLIP29.4■■■□□ 2.3
UBXN1-208ENST00000527421 PTPRMP28827 1452 aa29.39■■■□□ 2.3
UBXN1-208ENST00000527421 RIMS1Q86UR5 1692 aaKnown RBP29.38■■■□□ 2.29
UBXN1-208ENST00000527421 APLP2Q06481 763 aa29.38■■■□□ 2.29
UBXN1-208ENST00000527421 KANK4Q5T7N3 995 aaPredicted RBP29.38■■■□□ 2.29
UBXN1-208ENST00000527421 INO80Q9ULG1 1556 aaPredicted RBP29.36■■■□□ 2.29
UBXN1-208ENST00000527421 SPAG9O60271 1321 aaKnown RBP29.36■■■□□ 2.29
UBXN1-208ENST00000527421 ZNF644Q9H582 1327 aaPredicted RBP29.36■■■□□ 2.29
UBXN1-208ENST00000527421 ATP7AQ04656 1500 aa29.35■■■□□ 2.29
UBXN1-208ENST00000527421 FER1L4A9Z1Z3 1794 aa29.35■■■□□ 2.29
UBXN1-208ENST00000527421 CAMSAP2Q08AD1 1489 aa29.35■■■□□ 2.29
UBXN1-208ENST00000527421 MBD5Q9P267 1494 aa29.32■■■□□ 2.28
UBXN1-208ENST00000527421 MLECQ14165 292 aa29.32■■■□□ 2.28
UBXN1-208ENST00000527421 AGLP35573 1532 aa29.3■■■□□ 2.28
UBXN1-208ENST00000527421 MYOM3Q5VTT5 1437 aa29.27■■■□□ 2.28
UBXN1-208ENST00000527421 CCDC141Q6ZP82 1450 aa29.26■■■□□ 2.27
UBXN1-208ENST00000527421 ARHGEF5Q12774 1597 aa29.23■■■□□ 2.27
UBXN1-208ENST00000527421 ADGBQ8N7X0 1667 aa29.22■■■□□ 2.27
UBXN1-208ENST00000527421 MIA2Q96PC5 1412 aa29.22■■■□□ 2.27
UBXN1-208ENST00000527421 PLXNC1O60486 1568 aa29.2■■■□□ 2.26
UBXN1-208ENST00000527421 RTEL1-TNFRSF6BF6WH68 1400 aa29.2■■■□□ 2.26
UBXN1-208ENST00000527421 A2MP01023 1474 aa29.19■■■□□ 2.26
UBXN1-208ENST00000527421 RSPH4AQ5TD94 716 aa29.19■■■□□ 2.26
UBXN1-208ENST00000527421 PLPPR3Q6T4P5 718 aa29.13■■■□□ 2.25
UBXN1-208ENST00000527421 PTPN23Q9H3S7 1636 aa29.1■■■□□ 2.25
UBXN1-208ENST00000527421 MAST1Q9Y2H9 1570 aa29.09■■■□□ 2.25
UBXN1-208ENST00000527421 ESF1Q9H501 851 aaKnown RBP29.08■■■□□ 2.25
UBXN1-208ENST00000527421 TSPY4P0CV99 314 aa29.07■■■□□ 2.24
UBXN1-208ENST00000527421 TSPY10P0CW01 314 aa29.07■■■□□ 2.24
UBXN1-208ENST00000527421 FGD6Q6ZV73 1430 aa29.07■■■□□ 2.24
UBXN1-208ENST00000527421 FBXO41Q8TF61 875 aa29.07■■■□□ 2.24
UBXN1-208ENST00000527421 CNTLNQ9NXG0 1405 aa29.06■■■□□ 2.24
UBXN1-208ENST00000527421 DHX29Q7Z478 1369 aaKnown RBP29.04■■■□□ 2.24
UBXN1-208ENST00000527421 C3P01024 1663 aa29.04■■■□□ 2.24
UBXN1-208ENST00000527421 LMTK3Q96Q04 1460 aa29.04■■■□□ 2.24
UBXN1-208ENST00000527421 CROCC2H7BZ55 1655 aa29.02■■■□□ 2.24
UBXN1-208ENST00000527421 TCOF1Q13428 1488 aaKnown RBP29.02■■■□□ 2.24
UBXN1-208ENST00000527421 MROH2AA6NES4 1674 aa29.02■■■□□ 2.24
UBXN1-208ENST00000527421 CEBPAP49715 358 aaPredicted RBP29■■■□□ 2.23
UBXN1-208ENST00000527421 PREX1Q8TCU6 1659 aa28.99■■■□□ 2.23
UBXN1-208ENST00000527421 CLTCQ00610 1675 aaKnown RBP28.98■■■□□ 2.23
UBXN1-208ENST00000527421 DNMT1P26358 1616 aaKnown RBP28.98■■■□□ 2.23
UBXN1-208ENST00000527421 SHANK2Q9UPX8 1470 aa28.97■■■□□ 2.23
UBXN1-208ENST00000527421 GGT6Q6P531 493 aa28.96■■■□□ 2.23
UBXN1-208ENST00000527421 ABCC5O15440 1437 aa28.94■■■□□ 2.22
UBXN1-208ENST00000527421 SETD1BQ9UPS6 1966 aaKnown RBP28.93■■■□□ 2.22
UBXN1-208ENST00000527421 DAPK1P53355 1430 aa28.93■■■□□ 2.22
UBXN1-208ENST00000527421 KIF3BO15066 747 aa28.91■■■□□ 2.22
UBXN1-208ENST00000527421 PPP6R1Q9UPN7 881 aa28.91■■■□□ 2.22
UBXN1-208ENST00000527421 EIF2AK4Q9P2K8 1649 aaKnown RBP28.9■■■□□ 2.22
UBXN1-208ENST00000527421 FAM135AQ9P2D6 1515 aa28.89■■■□□ 2.21
UBXN1-208ENST00000527421 ZMYM3Q14202 1370 aa28.88■■■□□ 2.21
UBXN1-208ENST00000527421 UHRF1BP1Q6BDS2 1440 aa28.87■■■□□ 2.21
Retrieved 100 of 20,778 RNA–protein pairs in 7.7 ms