RNA–Protein interactions for RNA: ENST00000527047.5

PSMD13-206, Transcript of proteasome 26S subunit, non-ATPase 13, humanhuman

TSL 1 (best)

Gene PSMD13, Length 1,284 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PSMD13-206ENST00000527047 WDR7Q9Y4E6 1490 aa18.73■□□□□ 0.59
PSMD13-206ENST00000527047 ATP1B4Q9UN42 357 aaPredicted RBP18.71■□□□□ 0.59
PSMD13-206ENST00000527047 ABCC10Q5T3U5 1492 aa18.71■□□□□ 0.59
PSMD13-206ENST00000527047 ZBTB12Q9Y330 459 aaPredicted RBP18.7■□□□□ 0.58
PSMD13-206ENST00000527047 KIF13AQ9H1H9 1805 aa18.7■□□□□ 0.58
PSMD13-206ENST00000527047 DIP2BQ9P265 1576 aa18.69■□□□□ 0.58
PSMD13-206ENST00000527047 RBM42Q9BTD8 480 aaKnown RBP18.69■□□□□ 0.58
PSMD13-206ENST00000527047 CFAP43Q8NDM7 1665 aa18.66■□□□□ 0.58
PSMD13-206ENST00000527047 GLI2P10070 1586 aa18.66■□□□□ 0.58
PSMD13-206ENST00000527047 MAP3K1Q13233 1512 aa18.65■□□□□ 0.58
PSMD13-206ENST00000527047 MAGI3Q5TCQ9 1506 aa18.65■□□□□ 0.58
PSMD13-206ENST00000527047 TIAM1Q13009 1591 aa18.64■□□□□ 0.58
PSMD13-206ENST00000527047 PLEKHD1A6NEE1 506 aa18.64■□□□□ 0.57
PSMD13-206ENST00000527047 CDK11AQ9UQ88 783 aaPredicted RBP18.63■□□□□ 0.57
PSMD13-206ENST00000527047 TROQ12816 1431 aaPredicted RBP18.63■□□□□ 0.57
PSMD13-206ENST00000527047 ABCA9Q8IUA7 1624 aa18.6■□□□□ 0.57
PSMD13-206ENST00000527047 FAM69CQ0P6D2 419 aa18.59■□□□□ 0.57
PSMD13-206ENST00000527047 MAP3K4Q9Y6R4 1608 aa18.59■□□□□ 0.57
PSMD13-206ENST00000527047 KCNH8Q96L42 1107 aa18.58■□□□□ 0.56
PSMD13-206ENST00000527047 KIF14Q15058 1648 aa18.57■□□□□ 0.56
PSMD13-206ENST00000527047 GEMIN5Q8TEQ6 1508 aaKnown RBP eCLIP18.57■□□□□ 0.569e-11■■■□□ 17.3
PSMD13-206ENST00000527047 EHBP1L1Q8N3D4 1523 aa18.55■□□□□ 0.56
PSMD13-206ENST00000527047 LRRC9Q6ZRR7 1453 aa18.55■□□□□ 0.56
PSMD13-206ENST00000527047 TTC37Q6PGP7 1564 aa18.54■□□□□ 0.56
PSMD13-206ENST00000527047 MTUS2Q5JR59 1369 aa18.54■□□□□ 0.56
PSMD13-206ENST00000527047 PPRC1Q5VV67 1664 aaKnown RBP18.53■□□□□ 0.56
PSMD13-206ENST00000527047 KANK4Q5T7N3 995 aaPredicted RBP18.52■□□□□ 0.56
PSMD13-206ENST00000527047 CD109Q6YHK3 1445 aa18.5■□□□□ 0.55
PSMD13-206ENST00000527047 TSPOAP1O95153 1857 aa18.5■□□□□ 0.55
PSMD13-206ENST00000527047 MKRN4PQ13434 485 aaPredicted RBP18.48■□□□□ 0.55
PSMD13-206ENST00000527047 SUPT6HQ7KZ85 1726 aaKnown RBP18.48■□□□□ 0.55
PSMD13-206ENST00000527047 MYO5CQ9NQX4 1742 aa18.47■□□□□ 0.55
PSMD13-206ENST00000527047 CDC42BPAQ5VT25 1732 aa18.46■□□□□ 0.55
PSMD13-206ENST00000527047 ARAP3Q8WWN8 1544 aa18.45■□□□□ 0.54
PSMD13-206ENST00000527047 PLCH2O75038 1416 aa18.45■□□□□ 0.54
PSMD13-206ENST00000527047 NCOA2Q15596 1464 aa18.45■□□□□ 0.54
PSMD13-206ENST00000527047 PREX2Q70Z35 1606 aa18.44■□□□□ 0.54
PSMD13-206ENST00000527047 CDC42BPBQ9Y5S2 1711 aa18.43■□□□□ 0.54
PSMD13-206ENST00000527047 TEX14Q8IWB6 1497 aa18.42■□□□□ 0.54
PSMD13-206ENST00000527047 POTEHQ6S545 545 aa18.42■□□□□ 0.54
PSMD13-206ENST00000527047 GPATCH8Q9UKJ3 1502 aaKnown RBP18.42■□□□□ 0.54
PSMD13-206ENST00000527047 NEO1Q92859 1461 aa18.39■□□□□ 0.53
PSMD13-206ENST00000527047 ITSN2Q9NZM3 1697 aa18.38■□□□□ 0.53
PSMD13-206ENST00000527047 AKT1S1Q96B36 256 aa18.38■□□□□ 0.53
PSMD13-206ENST00000527047 CCNB3Q8WWL7 1395 aa18.38■□□□□ 0.53
PSMD13-206ENST00000527047 FANCAO15360 1455 aa18.38■□□□□ 0.53
PSMD13-206ENST00000527047 CFAP74Q9C0B2 1584 aa18.38■□□□□ 0.53
PSMD13-206ENST00000527047 PHLDB1Q86UU1 1377 aa18.36■□□□□ 0.53
PSMD13-206ENST00000527047 ARHGAP5Q13017 1502 aa18.35■□□□□ 0.53
PSMD13-206ENST00000527047 EFCAB2Q5VUJ9 269 aa18.33■□□□□ 0.52
PSMD13-206ENST00000527047 MYOM3Q5VTT5 1437 aa18.32■□□□□ 0.52
PSMD13-206ENST00000527047 AKNAQ7Z591 1439 aa18.32■□□□□ 0.52
PSMD13-206ENST00000527047 COL17A1Q9UMD9 1497 aaPredicted RBP18.32■□□□□ 0.52
PSMD13-206ENST00000527047 SAMD9LQ8IVG5 1584 aa18.31■□□□□ 0.52
PSMD13-206ENST00000527047 CFDP1Q9UEE9 299 aaPredicted RBP18.3■□□□□ 0.52
PSMD13-206ENST00000527047 PPARGC1BQ86YN6 1023 aaKnown RBP18.29■□□□□ 0.52
PSMD13-206ENST00000527047 MIA2Q96PC5 1412 aa18.29■□□□□ 0.52
PSMD13-206ENST00000527047 ABCC1P33527 1531 aa18.28■□□□□ 0.52
PSMD13-206ENST00000527047 KDM6BO15054 1643 aa18.27■□□□□ 0.52
PSMD13-206ENST00000527047 ADGRL1O94910 1474 aa18.27■□□□□ 0.52
PSMD13-206ENST00000527047 REM2Q8IYK8 340 aaPredicted RBP18.27■□□□□ 0.52
PSMD13-206ENST00000527047 CHRDL2Q6WN34 429 aa18.26■□□□□ 0.51
PSMD13-206ENST00000527047 ARHGEF12Q9NZN5 1544 aa18.26■□□□□ 0.51
PSMD13-206ENST00000527047 RICTORQ6R327 1708 aa18.26■□□□□ 0.51
PSMD13-206ENST00000527047 FGD6Q6ZV73 1430 aa18.25■□□□□ 0.51
PSMD13-206ENST00000527047 KIAA1107Q9UPP5 1409 aa18.25■□□□□ 0.51
PSMD13-206ENST00000527047 FRMPD1Q5SYB0 1578 aa18.25■□□□□ 0.51
PSMD13-206ENST00000527047 ZNF644Q9H582 1327 aaPredicted RBP18.24■□□□□ 0.51
PSMD13-206ENST00000527047 SCAPERQ9BY12 1400 aa18.24■□□□□ 0.51
PSMD13-206ENST00000527047 CAMSAP2Q08AD1 1489 aa18.24■□□□□ 0.51
PSMD13-206ENST00000527047 PLEKHH2Q8IVE3 1493 aa18.24■□□□□ 0.51
PSMD13-206ENST00000527047 DENND4BO75064 1496 aaPredicted RBP18.23■□□□□ 0.51
PSMD13-206ENST00000527047 PTPN23Q9H3S7 1636 aa18.23■□□□□ 0.51
PSMD13-206ENST00000527047 SYCP2Q9BX26 1530 aa18.23■□□□□ 0.51
PSMD13-206ENST00000527047 TCOF1Q13428 1488 aaKnown RBP18.22■□□□□ 0.51
PSMD13-206ENST00000527047 MBD5Q9P267 1494 aa18.22■□□□□ 0.51
PSMD13-206ENST00000527047 ZNF777Q9ULD5 760 aaPredicted RBP18.22■□□□□ 0.51
PSMD13-206ENST00000527047 POGZQ7Z3K3 1410 aa18.22■□□□□ 0.51
PSMD13-206ENST00000527047 SPDYE2BA6NHP3 402 aa18.21■□□□□ 0.51
PSMD13-206ENST00000527047 SPDYE6P0CI01 402 aa18.21■□□□□ 0.51
PSMD13-206ENST00000527047 SPDYE2Q495Y8 402 aa18.21■□□□□ 0.51
PSMD13-206ENST00000527047 TRAPPC8Q9Y2L5 1435 aa18.2■□□□□ 0.5
PSMD13-206ENST00000527047 KDM5CP41229 1560 aa18.2■□□□□ 0.5
PSMD13-206ENST00000527047 ZMYM4Q5VZL5 1548 aa18.19■□□□□ 0.5
PSMD13-206ENST00000527047 RAPGEF3O95398 923 aa18.19■□□□□ 0.5
PSMD13-206ENST00000527047 ZNF518AQ6AHZ1 1483 aa18.19■□□□□ 0.5
PSMD13-206ENST00000527047 ARHGEF5Q12774 1597 aa18.18■□□□□ 0.5
PSMD13-206ENST00000527047 HNRNPMP52272 730 aaKnown RBP eCLIP18.17■□□□□ 0.5
PSMD13-206ENST00000527047 RRBP1Q9P2E9 1410 aaKnown RBP18.16■□□□□ 0.5
PSMD13-206ENST00000527047 AFAP1Q8N556 730 aa18.15■□□□□ 0.5
PSMD13-206ENST00000527047 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.14■□□□□ 0.495e-6■■■□□ 14.8
PSMD13-206ENST00000527047 RSPH4AQ5TD94 716 aa18.13■□□□□ 0.49
PSMD13-206ENST00000527047 CCDC141Q6ZP82 1450 aa18.13■□□□□ 0.49
PSMD13-206ENST00000527047 MAGI2Q86UL8 1455 aa18.12■□□□□ 0.49
PSMD13-206ENST00000527047 MLH3Q9UHC1 1453 aa18.12■□□□□ 0.49
PSMD13-206ENST00000527047 HECW2Q9P2P5 1572 aa18.12■□□□□ 0.49
PSMD13-206ENST00000527047 DNMT1P26358 1616 aaKnown RBP18.12■□□□□ 0.49
PSMD13-206ENST00000527047 KIDINS220Q9ULH0 1771 aa18.11■□□□□ 0.49
PSMD13-206ENST00000527047 CROCC2H7BZ55 1655 aa18.1■□□□□ 0.49
PSMD13-206ENST00000527047 INO80Q9ULG1 1556 aaPredicted RBP18.1■□□□□ 0.49
Retrieved 100 of 20,778 RNA–protein pairs in 16 ms