RNA–Protein interactions for RNA: ENST00000526971.1

PKP3-204, Transcript of plakophilin 3, humanhuman

TSL 2

Gene PKP3, Length 532 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PKP3-204ENST00000526971 LRRIQ1Q96JM4 1722 aa31.16■■■□□ 2.58
PKP3-204ENST00000526971 POGZQ7Z3K3 1410 aa31.15■■■□□ 2.58
PKP3-204ENST00000526971 FMN1Q68DA7 1419 aa31.14■■■□□ 2.58
PKP3-204ENST00000526971 MAGI2Q86UL8 1455 aa31.14■■■□□ 2.57
PKP3-204ENST00000526971 SCAPERQ9BY12 1400 aa31.13■■■□□ 2.57
PKP3-204ENST00000526971 FER1L4A9Z1Z3 1794 aa31.12■■■□□ 2.57
PKP3-204ENST00000526971 ATP1B4Q9UN42 357 aaPredicted RBP31.06■■■□□ 2.56
PKP3-204ENST00000526971 TROQ12816 1431 aaPredicted RBP31.01■■■□□ 2.55
PKP3-204ENST00000526971 PLPPR3Q6T4P5 718 aa31.01■■■□□ 2.55
PKP3-204ENST00000526971 FBXO41Q8TF61 875 aa31.01■■■□□ 2.55
PKP3-204ENST00000526971 MLECQ14165 292 aa31■■■□□ 2.55
PKP3-204ENST00000526971 ARHGEF12Q9NZN5 1544 aa30.99■■■□□ 2.55
PKP3-204ENST00000526971 ATP10AO60312 1499 aa30.98■■■□□ 2.55
PKP3-204ENST00000526971 HSPA2P54652 639 aa30.98■■■□□ 2.55
PKP3-204ENST00000526971 C9orf84Q5VXU9 1444 aa30.98■■■□□ 2.55
PKP3-204ENST00000526971 EFCAB2Q5VUJ9 269 aa30.97■■■□□ 2.55
PKP3-204ENST00000526971 CDC42BPBQ9Y5S2 1711 aa30.97■■■□□ 2.55
PKP3-204ENST00000526971 ARHGAP5Q13017 1502 aa30.97■■■□□ 2.55
PKP3-204ENST00000526971 KDM5CP41229 1560 aa30.96■■■□□ 2.55
PKP3-204ENST00000526971 CDK11AQ9UQ88 783 aaPredicted RBP30.93■■■□□ 2.54
PKP3-204ENST00000526971 ZNF518AQ6AHZ1 1483 aa30.93■■■□□ 2.54
PKP3-204ENST00000526971 CLIP1P30622 1438 aa30.9■■■□□ 2.54
PKP3-204ENST00000526971 DIP2CQ9Y2E4 1556 aa30.89■■■□□ 2.54
PKP3-204ENST00000526971 PREX2Q70Z35 1606 aa30.89■■■□□ 2.54
PKP3-204ENST00000526971 ABCA6Q8N139 1617 aa30.87■■■□□ 2.53
PKP3-204ENST00000526971 PREX1Q8TCU6 1659 aa30.87■■■□□ 2.53
PKP3-204ENST00000526971 AFAP1Q8N556 730 aa30.86■■■□□ 2.53
PKP3-204ENST00000526971 ITSN2Q9NZM3 1697 aa30.84■■■□□ 2.53
PKP3-204ENST00000526971 ABCC1P33527 1531 aa30.83■■■□□ 2.53
PKP3-204ENST00000526971 CASKIN1Q8WXD9 1431 aa30.82■■■□□ 2.52
PKP3-204ENST00000526971 REREQ9P2R6 1566 aa30.82■■■□□ 2.52
PKP3-204ENST00000526971 CDC42BPAQ5VT25 1732 aa30.81■■■□□ 2.52
PKP3-204ENST00000526971 CCDC18Q5T9S5 1454 aa30.8■■■□□ 2.52
PKP3-204ENST00000526971 CEBPAP49715 358 aaPredicted RBP30.78■■■□□ 2.52
PKP3-204ENST00000526971 TRAPPC8Q9Y2L5 1435 aa30.78■■■□□ 2.52
PKP3-204ENST00000526971 MLH3Q9UHC1 1453 aa30.76■■■□□ 2.52
PKP3-204ENST00000526971 KIDINS220Q9ULH0 1771 aa30.74■■■□□ 2.51
PKP3-204ENST00000526971 C3P01024 1663 aa30.73■■■□□ 2.51
PKP3-204ENST00000526971 STRCQ7RTU9 1775 aa30.73■■■□□ 2.51
PKP3-204ENST00000526971 LOC105371045A0A1W2PR82 267 aa30.72■■■□□ 2.51
PKP3-204ENST00000526971 FYCO1Q9BQS8 1478 aa30.7■■■□□ 2.51
PKP3-204ENST00000526971 SETD1BQ9UPS6 1966 aaKnown RBP30.7■■■□□ 2.51
PKP3-204ENST00000526971 AGLP35573 1532 aa30.69■■■□□ 2.5
PKP3-204ENST00000526971 MYT1LQ9UL68 1186 aa30.69■■■□□ 2.5
PKP3-204ENST00000526971 SAMD9LQ8IVG5 1584 aa30.66■■■□□ 2.5
PKP3-204ENST00000526971 CERKQ8TCT0 537 aa30.63■■■□□ 2.49
PKP3-204ENST00000526971 CEP162Q5TB80 1403 aa30.63■■■□□ 2.49
PKP3-204ENST00000526971 UHRF1BP1Q6BDS2 1440 aa30.63■■■□□ 2.49
PKP3-204ENST00000526971 SYCP2Q9BX26 1530 aa30.6■■■□□ 2.49
PKP3-204ENST00000526971 GPATCH8Q9UKJ3 1502 aaKnown RBP30.57■■■□□ 2.49
PKP3-204ENST00000526971 SUPT6HQ7KZ85 1726 aaKnown RBP30.52■■■□□ 2.48
PKP3-204ENST00000526971 ZNF777Q9ULD5 760 aaPredicted RBP30.51■■■□□ 2.47
PKP3-204ENST00000526971 INO80Q9ULG1 1556 aaPredicted RBP30.5■■■□□ 2.47
PKP3-204ENST00000526971 MROH2AA6NES4 1674 aa30.5■■■□□ 2.47
PKP3-204ENST00000526971 CNTLNQ9NXG0 1405 aa30.47■■■□□ 2.47
PKP3-204ENST00000526971 ATP7AQ04656 1500 aa30.47■■■□□ 2.47
PKP3-204ENST00000526971 PLXNC1O60486 1568 aa30.46■■■□□ 2.47
PKP3-204ENST00000526971 HNRNPMP52272 730 aaKnown RBP eCLIP30.45■■■□□ 2.47
PKP3-204ENST00000526971 ESF1Q9H501 851 aaKnown RBP30.44■■■□□ 2.46
PKP3-204ENST00000526971 SPAG9O60271 1321 aaKnown RBP30.43■■■□□ 2.46
PKP3-204ENST00000526971 PTPRTO14522 1441 aa30.42■■■□□ 2.46
PKP3-204ENST00000526971 KIAA1107Q9UPP5 1409 aa30.42■■■□□ 2.46
PKP3-204ENST00000526971 DMRT2Q9Y5R5 561 aa30.42■■■□□ 2.46
PKP3-204ENST00000526971 CLTCQ00610 1675 aaKnown RBP30.42■■■□□ 2.46
PKP3-204ENST00000526971 TIAM1Q13009 1591 aa30.4■■■□□ 2.46
PKP3-204ENST00000526971 NCOA1Q15788 1441 aa30.39■■■□□ 2.46
PKP3-204ENST00000526971 PLEKHH2Q8IVE3 1493 aa30.39■■■□□ 2.46
PKP3-204ENST00000526971 CCNB3Q8WWL7 1395 aa30.39■■■□□ 2.45
PKP3-204ENST00000526971 CFDP1Q9UEE9 299 aaPredicted RBP30.37■■■□□ 2.45
PKP3-204ENST00000526971 NPATQ14207 1427 aa30.37■■■□□ 2.45
PKP3-204ENST00000526971 A2MP01023 1474 aa30.37■■■□□ 2.45
PKP3-204ENST00000526971 LTBP4Q8N2S1 1624 aa30.36■■■□□ 2.45
PKP3-204ENST00000526971 MTUS2Q5JR59 1369 aa30.35■■■□□ 2.45
PKP3-204ENST00000526971 ADGBQ8N7X0 1667 aa30.34■■■□□ 2.45
PKP3-204ENST00000526971 CAMSAP1Q5T5Y3 1602 aa30.34■■■□□ 2.45
PKP3-204ENST00000526971 ZMYM3Q14202 1370 aa30.34■■■□□ 2.45
PKP3-204ENST00000526971 MYO3AQ8NEV4 1616 aa30.33■■■□□ 2.45
PKP3-204ENST00000526971 ZNF142P52746 1687 aaPredicted RBP30.33■■■□□ 2.45
PKP3-204ENST00000526971 EHBP1L1Q8N3D4 1523 aa30.32■■■□□ 2.44
PKP3-204ENST00000526971 ZNF644Q9H582 1327 aaPredicted RBP30.29■■■□□ 2.44
PKP3-204ENST00000526971 MBD5Q9P267 1494 aa30.28■■■□□ 2.44
PKP3-204ENST00000526971 VPS8Q8N3P4 1428 aa30.26■■■□□ 2.43
PKP3-204ENST00000526971 PTPRKQ15262 1439 aa30.25■■■□□ 2.43
PKP3-204ENST00000526971 CEP170BQ9Y4F5 1589 aaPredicted RBP30.24■■■□□ 2.43
PKP3-204ENST00000526971 GGT6Q6P531 493 aa30.2■■■□□ 2.43
PKP3-204ENST00000526971 NCKAP5LQ9HCH0 1330 aa30.18■■■□□ 2.42
PKP3-204ENST00000526971 IQSEC2Q5JU85 1478 aa30.18■■■□□ 2.42
PKP3-204ENST00000526971 PLA2R1Q13018 1463 aa30.16■■■□□ 2.42
PKP3-204ENST00000526971 RTEL1-TNFRSF6BF6WH68 1400 aa30.15■■■□□ 2.42
PKP3-204ENST00000526971 TCOF1Q13428 1488 aaKnown RBP30.15■■■□□ 2.42
PKP3-204ENST00000526971 NCOA2Q15596 1464 aa30.13■■■□□ 2.41
PKP3-204ENST00000526971 CAMSAP2Q08AD1 1489 aa30.12■■■□□ 2.41
PKP3-204ENST00000526971 CCDC141Q6ZP82 1450 aa30.11■■■□□ 2.41
PKP3-204ENST00000526971 ZNF335Q9H4Z2 1342 aaPredicted RBP30.1■■■□□ 2.41
PKP3-204ENST00000526971 DHX29Q7Z478 1369 aaKnown RBP30.1■■■□□ 2.41
PKP3-204ENST00000526971 DNMT1P26358 1616 aaKnown RBP30.09■■■□□ 2.41
PKP3-204ENST00000526971 DISP3Q9P2K9 1392 aa30.08■■■□□ 2.41
PKP3-204ENST00000526971 PPP6R1Q9UPN7 881 aa30.08■■■□□ 2.41
PKP3-204ENST00000526971 A2ML1A8K2U0 1454 aa30.06■■■□□ 2.4
PKP3-204ENST00000526971 SPATA31D1Q6ZQQ2 1576 aa30.06■■■□□ 2.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.4 ms