RNA–Protein interactions for RNA: ENST00000526881.1

TRIM29-209, Transcript of tripartite motif containing 29, humanhuman

TSL 3

Gene TRIM29, Length 385 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM29-209ENST00000526881 HNRNPUL2Q1KMD3 747 aaKnown RBP11.91□□□□□ -0.5
TRIM29-209ENST00000526881 RICTORQ6R327 1708 aa11.91□□□□□ -0.5
TRIM29-209ENST00000526881 NEO1Q92859 1461 aa11.9□□□□□ -0.5
TRIM29-209ENST00000526881 FKBP8Q14318 412 aa11.88□□□□□ -0.51
TRIM29-209ENST00000526881 FANCAO15360 1455 aa11.88□□□□□ -0.51
TRIM29-209ENST00000526881 FMN1Q68DA7 1419 aa11.87□□□□□ -0.51
TRIM29-209ENST00000526881 AKNAQ7Z591 1439 aa11.86□□□□□ -0.51
TRIM29-209ENST00000526881 ARHGEF40Q8TER5 1519 aa11.86□□□□□ -0.51
TRIM29-209ENST00000526881 RNF216Q9NWF9 866 aaPredicted RBP11.86□□□□□ -0.51
TRIM29-209ENST00000526881 ADAMTSL3P82987 1691 aa11.85□□□□□ -0.51
TRIM29-209ENST00000526881 PLEKHD1A6NEE1 506 aa11.85□□□□□ -0.51
TRIM29-209ENST00000526881 YEATS2Q9ULM3 1422 aa11.85□□□□□ -0.51
TRIM29-209ENST00000526881 HECW2Q9P2P5 1572 aa11.84□□□□□ -0.51
TRIM29-209ENST00000526881 ZMYM4Q5VZL5 1548 aa11.83□□□□□ -0.52
TRIM29-209ENST00000526881 PLCH2O75038 1416 aa11.83□□□□□ -0.52
TRIM29-209ENST00000526881 TROQ12816 1431 aaPredicted RBP11.83□□□□□ -0.52
TRIM29-209ENST00000526881 BCORL1Q5H9F3 1711 aa11.83□□□□□ -0.52
TRIM29-209ENST00000526881 DENND4BO75064 1496 aaPredicted RBP11.83□□□□□ -0.52
TRIM29-209ENST00000526881 PHLDB1Q86UU1 1377 aa11.82□□□□□ -0.52
TRIM29-209ENST00000526881 CASKIN1Q8WXD9 1431 aa11.82□□□□□ -0.52
TRIM29-209ENST00000526881 MYO5CQ9NQX4 1742 aa11.82□□□□□ -0.52
TRIM29-209ENST00000526881 MADDQ8WXG6 1647 aa11.82□□□□□ -0.52
TRIM29-209ENST00000526881 CFAP74Q9C0B2 1584 aa11.81□□□□□ -0.52
TRIM29-209ENST00000526881 POGZQ7Z3K3 1410 aa11.81□□□□□ -0.52
TRIM29-209ENST00000526881 ATP1B4Q9UN42 357 aaPredicted RBP11.81□□□□□ -0.52
TRIM29-209ENST00000526881 CDC42BPBQ9Y5S2 1711 aa11.8□□□□□ -0.52
TRIM29-209ENST00000526881 CLIP1P30622 1438 aa11.79□□□□□ -0.52
TRIM29-209ENST00000526881 ARHGEF12Q9NZN5 1544 aa11.79□□□□□ -0.52
TRIM29-209ENST00000526881 SCAPERQ9BY12 1400 aa11.78□□□□□ -0.52
TRIM29-209ENST00000526881 PTPRMP28827 1452 aa11.78□□□□□ -0.52
TRIM29-209ENST00000526881 ZFYVE16Q7Z3T8 1539 aa11.78□□□□□ -0.52
TRIM29-209ENST00000526881 PREX2Q70Z35 1606 aa11.78□□□□□ -0.52
TRIM29-209ENST00000526881 FYCO1Q9BQS8 1478 aa11.77□□□□□ -0.52
TRIM29-209ENST00000526881 KDM5CP41229 1560 aa11.76□□□□□ -0.53
TRIM29-209ENST00000526881 CDC42BPAQ5VT25 1732 aa11.76□□□□□ -0.53
TRIM29-209ENST00000526881 ARHGAP5Q13017 1502 aa11.76□□□□□ -0.53
TRIM29-209ENST00000526881 RIMS1Q86UR5 1692 aaKnown RBP11.75□□□□□ -0.53
TRIM29-209ENST00000526881 CCDC18Q5T9S5 1454 aa11.75□□□□□ -0.53
TRIM29-209ENST00000526881 ABCC1P33527 1531 aa11.75□□□□□ -0.53
TRIM29-209ENST00000526881 ATXN8OSP0DMR3 200 aa11.74□□□□□ -0.53
TRIM29-209ENST00000526881 TRAPPC8Q9Y2L5 1435 aa11.74□□□□□ -0.53
TRIM29-209ENST00000526881 ABCA6Q8N139 1617 aa11.74□□□□□ -0.53
TRIM29-209ENST00000526881 ITSN2Q9NZM3 1697 aa11.73□□□□□ -0.53
TRIM29-209ENST00000526881 DIP2CQ9Y2E4 1556 aa11.73□□□□□ -0.53
TRIM29-209ENST00000526881 SAMD9LQ8IVG5 1584 aa11.72□□□□□ -0.53
TRIM29-209ENST00000526881 CEP162Q5TB80 1403 aa11.72□□□□□ -0.53
TRIM29-209ENST00000526881 AFAP1Q8N556 730 aa11.72□□□□□ -0.53
TRIM29-209ENST00000526881 MAGI2Q86UL8 1455 aa11.71□□□□□ -0.53
TRIM29-209ENST00000526881 LMTK3Q96Q04 1460 aa11.7□□□□□ -0.54
TRIM29-209ENST00000526881 GPATCH8Q9UKJ3 1502 aaKnown RBP11.7□□□□□ -0.54
TRIM29-209ENST00000526881 ZNF518AQ6AHZ1 1483 aa11.7□□□□□ -0.54
TRIM29-209ENST00000526881 ARID4BQ4LE39 1312 aaPredicted RBP11.69□□□□□ -0.54
TRIM29-209ENST00000526881 SLC4A2P04920 1241 aa11.69□□□□□ -0.54
TRIM29-209ENST00000526881 EFCAB2Q5VUJ9 269 aa11.69□□□□□ -0.54
TRIM29-209ENST00000526881 SYCP2Q9BX26 1530 aa11.69□□□□□ -0.54
TRIM29-209ENST00000526881 FER1L4A9Z1Z3 1794 aa11.69□□□□□ -0.54
TRIM29-209ENST00000526881 KIDINS220Q9ULH0 1771 aa11.69□□□□□ -0.54
TRIM29-209ENST00000526881 ATP10AO60312 1499 aa11.68□□□□□ -0.54
TRIM29-209ENST00000526881 C9orf84Q5VXU9 1444 aa11.68□□□□□ -0.54
TRIM29-209ENST00000526881 TIAM1Q13009 1591 aa11.67□□□□□ -0.54
TRIM29-209ENST00000526881 LOC105371045A0A1W2PR82 267 aa11.67□□□□□ -0.54
TRIM29-209ENST00000526881 MLECQ14165 292 aa11.67□□□□□ -0.54
TRIM29-209ENST00000526881 CDK11AQ9UQ88 783 aaPredicted RBP11.67□□□□□ -0.54
TRIM29-209ENST00000526881 MLH3Q9UHC1 1453 aa11.65□□□□□ -0.54
TRIM29-209ENST00000526881 REREQ9P2R6 1566 aa11.65□□□□□ -0.54
TRIM29-209ENST00000526881 INO80Q9ULG1 1556 aaPredicted RBP11.62□□□□□ -0.55
TRIM29-209ENST00000526881 ZNF644Q9H582 1327 aaPredicted RBP11.62□□□□□ -0.55
TRIM29-209ENST00000526881 EHBP1L1Q8N3D4 1523 aa11.62□□□□□ -0.55
TRIM29-209ENST00000526881 MYCNP04198 464 aaPredicted RBP11.62□□□□□ -0.55
TRIM29-209ENST00000526881 CEBPAP49715 358 aaPredicted RBP11.61□□□□□ -0.55
TRIM29-209ENST00000526881 HSPA2P54652 639 aa11.61□□□□□ -0.55
TRIM29-209ENST00000526881 CACNB1Q02641 598 aaPredicted RBP11.61□□□□□ -0.55
TRIM29-209ENST00000526881 PLXNC1O60486 1568 aa11.6□□□□□ -0.55
TRIM29-209ENST00000526881 MBD5Q9P267 1494 aa11.6□□□□□ -0.55
TRIM29-209ENST00000526881 HNRNPMP52272 730 aaKnown RBP eCLIP11.6□□□□□ -0.55
TRIM29-209ENST00000526881 ILDR1Q86SU0 546 aaPredicted RBP11.6□□□□□ -0.55
TRIM29-209ENST00000526881 ZNF777Q9ULD5 760 aaPredicted RBP11.6□□□□□ -0.55
TRIM29-209ENST00000526881 AGLP35573 1532 aa11.6□□□□□ -0.55
TRIM29-209ENST00000526881 MTUS2Q5JR59 1369 aa11.59□□□□□ -0.55
TRIM29-209ENST00000526881 ATP7AQ04656 1500 aa11.59□□□□□ -0.55
TRIM29-209ENST00000526881 C3P01024 1663 aa11.59□□□□□ -0.55
TRIM29-209ENST00000526881 NCOA2Q15596 1464 aa11.57□□□□□ -0.56
TRIM29-209ENST00000526881 CCNB3Q8WWL7 1395 aa11.57□□□□□ -0.56
TRIM29-209ENST00000526881 VPS8Q8N3P4 1428 aa11.57□□□□□ -0.56
TRIM29-209ENST00000526881 KIAA1107Q9UPP5 1409 aa11.57□□□□□ -0.56
TRIM29-209ENST00000526881 SUPT6HQ7KZ85 1726 aaKnown RBP11.57□□□□□ -0.56
TRIM29-209ENST00000526881 HOXD11P31277 338 aaPredicted RBP11.56□□□□□ -0.56
TRIM29-209ENST00000526881 CFDP1Q9UEE9 299 aaPredicted RBP11.55□□□□□ -0.56
TRIM29-209ENST00000526881 PREX1Q8TCU6 1659 aa11.55□□□□□ -0.56
TRIM29-209ENST00000526881 KANK4Q5T7N3 995 aaPredicted RBP11.54□□□□□ -0.56
TRIM29-209ENST00000526881 CAMSAP2Q08AD1 1489 aa11.54□□□□□ -0.56
TRIM29-209ENST00000526881 ADGBQ8N7X0 1667 aa11.54□□□□□ -0.56
TRIM29-209ENST00000526881 STRCQ7RTU9 1775 aa11.54□□□□□ -0.56
TRIM29-209ENST00000526881 LRRC9Q6ZRR7 1453 aa11.53□□□□□ -0.56
TRIM29-209ENST00000526881 MYT1LQ9UL68 1186 aa11.53□□□□□ -0.56
TRIM29-209ENST00000526881 A2MP01023 1474 aa11.52□□□□□ -0.56
TRIM29-209ENST00000526881 SPAG9O60271 1321 aaKnown RBP11.52□□□□□ -0.57
TRIM29-209ENST00000526881 PLEKHH2Q8IVE3 1493 aa11.51□□□□□ -0.57
TRIM29-209ENST00000526881 CLTCQ00610 1675 aaKnown RBP11.51□□□□□ -0.57
TRIM29-209ENST00000526881 DCAF8L1A6NGE4 600 aa11.5□□□□□ -0.57
Retrieved 100 of 20,778 RNA–protein pairs in 26.5 ms