RNA–Protein interactions for RNA: ENST00000526874.5

CTR9-203, Transcript of CTR9 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 4

Gene CTR9, Length 565 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTR9-203ENST00000526874 VSIG10Q8N0Z9 540 aa9.98□□□□□ -0.81
CTR9-203ENST00000526874 LARP6Q9BRS8 491 aaKnown RBP9.98□□□□□ -0.81
CTR9-203ENST00000526874 CRISPLD2Q9H0B8 497 aa9.97□□□□□ -0.81
CTR9-203ENST00000526874 C2orf72A6NCS6 295 aa9.96□□□□□ -0.82
CTR9-203ENST00000526874 TMC2Q8TDI7 906 aa9.95□□□□□ -0.82
CTR9-203ENST00000526874 EIF2AK3Q9NZJ5 1116 aaKnown RBP9.95□□□□□ -0.82
CTR9-203ENST00000526874 PDE4AP27815 886 aa9.93□□□□□ -0.82
CTR9-203ENST00000526874 LHX8Q68G74 356 aa9.93□□□□□ -0.82
CTR9-203ENST00000526874 DSG2Q14126 1118 aa9.92□□□□□ -0.82
CTR9-203ENST00000526874 SCUBE2Q9NQ36 999 aa9.92□□□□□ -0.82
CTR9-203ENST00000526874 GPHNQ9NQX3 736 aaPredicted RBP9.92□□□□□ -0.82
CTR9-203ENST00000526874 WDR70Q9NW82 654 aa9.92□□□□□ -0.82
CTR9-203ENST00000526874 KIF3CO14782 793 aa9.91□□□□□ -0.82
CTR9-203ENST00000526874 DDX27Q96GQ7 796 aaKnown RBP9.91□□□□□ -0.82
CTR9-203ENST00000526874 SLAIN1Q8ND83 568 aa9.9□□□□□ -0.82
CTR9-203ENST00000526874 PPP1R15BQ5SWA1 713 aa9.89□□□□□ -0.83
CTR9-203ENST00000526874 OTUD5Q96G74 571 aa9.89□□□□□ -0.83
CTR9-203ENST00000526874 MFSD10Q14728 455 aa9.88□□□□□ -0.83
CTR9-203ENST00000526874 PLPP6Q8IY26 295 aa9.87□□□□□ -0.83
CTR9-203ENST00000526874 FOXK1P85037 733 aa9.85□□□□□ -0.83
CTR9-203ENST00000526874 MAMSTRQ6ZN01 415 aa9.85□□□□□ -0.83
CTR9-203ENST00000526874 KCNV2Q8TDN2 545 aa9.84□□□□□ -0.83
CTR9-203ENST00000526874 PRKCSHP14314 528 aaPredicted RBP9.83□□□□□ -0.84
CTR9-203ENST00000526874 E2F4Q16254 413 aa9.82□□□□□ -0.84
CTR9-203ENST00000526874 UPF1Q92900 1129 aaKnown RBP eCLIP9.81□□□□□ -0.84
CTR9-203ENST00000526874 EMILIN3Q9NT22 766 aa9.8□□□□□ -0.84
CTR9-203ENST00000526874 CAMK2BQ13554 666 aa9.76□□□□□ -0.85
CTR9-203ENST00000526874 DPYSL4O14531 572 aa9.75□□□□□ -0.85
CTR9-203ENST00000526874 HOXB3P14651 431 aaPredicted RBP9.75□□□□□ -0.85
CTR9-203ENST00000526874 P3H3Q8IVL6 736 aa9.74□□□□□ -0.85
CTR9-203ENST00000526874 KHSRPQ92945 711 aaKnown RBP eCLIP9.72□□□□□ -0.85
CTR9-203ENST00000526874 OXER1Q8TDS5 423 aa9.7□□□□□ -0.86
CTR9-203ENST00000526874 MAP3K9P80192 1104 aa9.69□□□□□ -0.86
CTR9-203ENST00000526874 DOK7Q18PE1 504 aa9.69□□□□□ -0.86
CTR9-203ENST00000526874 ARHGEF1Q92888 912 aaKnown RBP9.68□□□□□ -0.86
CTR9-203ENST00000526874 PCDHGA4Q9Y5G9 962 aa9.68□□□□□ -0.86
CTR9-203ENST00000526874 ARSIQ5FYB1 569 aa9.67□□□□□ -0.86
CTR9-203ENST00000526874 ZNF710Q8N1W2 664 aa9.67□□□□□ -0.86
CTR9-203ENST00000526874 NBR1Q14596 966 aa9.66□□□□□ -0.86
CTR9-203ENST00000526874 PTCD2Q8WV60 388 aaKnown RBP9.66□□□□□ -0.86
CTR9-203ENST00000526874 SEMA3EO15041 775 aa9.65□□□□□ -0.86
CTR9-203ENST00000526874 SLC34A2O95436 690 aa9.65□□□□□ -0.86
CTR9-203ENST00000526874 EVI5O60447 810 aa9.64□□□□□ -0.87
CTR9-203ENST00000526874 NUDT7P0C024 238 aa9.64□□□□□ -0.87
CTR9-203ENST00000526874 RIMBP2O15034 1052 aa9.63□□□□□ -0.87
CTR9-203ENST00000526874 SNPHO15079 494 aa9.63□□□□□ -0.87
CTR9-203ENST00000526874 GPR153Q6NV75 609 aa9.62□□□□□ -0.87
CTR9-203ENST00000526874 FAM163AQ96GL9 167 aaPredicted RBP9.62□□□□□ -0.87
CTR9-203ENST00000526874 ARIH1Q9Y4X5 557 aaPredicted RBP9.62□□□□□ -0.87
CTR9-203ENST00000526874 TBC1D12O60347 775 aa9.61□□□□□ -0.87
CTR9-203ENST00000526874 MLLT3P42568 568 aaPredicted RBP9.61□□□□□ -0.87
CTR9-203ENST00000526874 PDIA6Q15084 440 aa9.61□□□□□ -0.87
CTR9-203ENST00000526874 BCANQ96GW7 911 aa9.61□□□□□ -0.87
CTR9-203ENST00000526874 ST18O60284 1047 aa9.6□□□□□ -0.87
CTR9-203ENST00000526874 DDX12PQ92771 950 aa9.59□□□□□ -0.87
CTR9-203ENST00000526874 DAXXQ9UER7 740 aaPredicted RBP9.58□□□□□ -0.88
CTR9-203ENST00000526874 GRXCR2A6NFK2 248 aa9.57□□□□□ -0.88
CTR9-203ENST00000526874 MARVELD3Q96A59 401 aa9.57□□□□□ -0.88
CTR9-203ENST00000526874 ZSWIM6Q9HCJ5 1215 aa9.57□□□□□ -0.88
CTR9-203ENST00000526874 KDM4FA0A1W2PPD8 638 aa9.56□□□□□ -0.88
CTR9-203ENST00000526874 SPDYE16A6NNV3 312 aaPredicted RBP9.56□□□□□ -0.88
CTR9-203ENST00000526874 HOXB1P14653 301 aaPredicted RBP9.56□□□□□ -0.88
CTR9-203ENST00000526874 ZNF316A6NFI3 1004 aaPredicted RBP9.55□□□□□ -0.88
CTR9-203ENST00000526874 LCE2DQ5TA82 110 aaPredicted RBP9.55□□□□□ -0.88
CTR9-203ENST00000526874 LHX6Q9UPM6 363 aa9.55□□□□□ -0.88
CTR9-203ENST00000526874 TESPA1A2RU30 521 aaPredicted RBP9.54□□□□□ -0.88
CTR9-203ENST00000526874 PRIM1P49642 420 aaKnown RBP9.51□□□□□ -0.89
CTR9-203ENST00000526874 ANO8Q9HCE9 1232 aaPredicted RBP9.51□□□□□ -0.89
CTR9-203ENST00000526874 EMP3P54852 163 aa9.5□□□□□ -0.89
CTR9-203ENST00000526874 ZNF454Q8N9F8 522 aa9.5□□□□□ -0.89
CTR9-203ENST00000526874 RBM26Q5T8P6 1007 aaKnown RBP9.49□□□□□ -0.89
CTR9-203ENST00000526874 PCDHGA10Q9Y5H3 936 aa9.49□□□□□ -0.89
CTR9-203ENST00000526874 FAM205CA6NFA0 338 aa9.48□□□□□ -0.89
CTR9-203ENST00000526874 PTGER2P43116 358 aa9.48□□□□□ -0.89
CTR9-203ENST00000526874 RBM33Q96EV2 1170 aaKnown RBP9.48□□□□□ -0.89
CTR9-203ENST00000526874 ERBB3P21860 1342 aa9.48□□□□□ -0.89
CTR9-203ENST00000526874 VARS2Q5ST30 1063 aaKnown RBP9.47□□□□□ -0.89
CTR9-203ENST00000526874 OSBPP22059 807 aa9.46□□□□□ -0.9
CTR9-203ENST00000526874 FOSBP53539 338 aa9.46□□□□□ -0.9
CTR9-203ENST00000526874 TPRNQ4KMQ1 711 aa9.46□□□□□ -0.9
CTR9-203ENST00000526874 LMOD2Q6P5Q4 547 aa9.46□□□□□ -0.9
CTR9-203ENST00000526874 POTEB3A0JP26 581 aa9.45□□□□□ -0.9
CTR9-203ENST00000526874 PHF14O94880 888 aa9.45□□□□□ -0.9
CTR9-203ENST00000526874 POTEBQ6S5H4 581 aa9.45□□□□□ -0.9
CTR9-203ENST00000526874 JPH4Q96JJ6 628 aa9.45□□□□□ -0.9
CTR9-203ENST00000526874 DHX30Q7L2E3 1194 aaKnown RBP eCLIP9.44□□□□□ -0.9
CTR9-203ENST00000526874 ADAM33Q9BZ11 813 aa9.44□□□□□ -0.9
CTR9-203ENST00000526874 SMYD5Q6GMV2 418 aa9.43□□□□□ -0.9
CTR9-203ENST00000526874 CDHR5Q9HBB8 845 aa9.43□□□□□ -0.9
CTR9-203ENST00000526874 TIMELESSQ9UNS1 1208 aa9.43□□□□□ -0.9
CTR9-203ENST00000526874 TULP1O00294 542 aaPredicted RBP9.42□□□□□ -0.9
CTR9-203ENST00000526874 MAP3K7O43318 606 aa9.42□□□□□ -0.9
CTR9-203ENST00000526874 TSR1Q2NL82 804 aaKnown RBP9.42□□□□□ -0.9
CTR9-203ENST00000526874 PPP4R3BQ5MIZ7 849 aa9.42□□□□□ -0.9
CTR9-203ENST00000526874 TYW1BQ6NUM6 668 aa9.42□□□□□ -0.9
CTR9-203ENST00000526874 ZDHHC16Q969W1 377 aa9.42□□□□□ -0.9
CTR9-203ENST00000526874 HS3ST6Q96QI5 342 aa9.42□□□□□ -0.9
CTR9-203ENST00000526874 EN1Q05925 392 aaPredicted RBP9.41□□□□□ -0.9
CTR9-203ENST00000526874 NUTM2FA1L443 756 aa9.4□□□□□ -0.9
CTR9-203ENST00000526874 EPAS1Q99814 870 aa9.4□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms