RNA–Protein interactions for RNA: ENST00000526258.5

KDM2A-207, Transcript of lysine demethylase 2A, humanhuman

TSL 1 (best)

Gene KDM2A, Length 5,671 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
KDM2A-207ENST00000526258 CFAP44Q96MT7 982 aa16.34■□□□□ 0.21
KDM2A-207ENST00000526258 SKOR2Q2VWA4 1001 aaPredicted RBP16.34■□□□□ 0.21
KDM2A-207ENST00000526258 HTATSF1O43719 755 aaKnown RBP16.33■□□□□ 0.2
KDM2A-207ENST00000526258 OS9Q13438 667 aaPredicted RBP16.32■□□□□ 0.2
KDM2A-207ENST00000526258 MAPK8IP3Q9UPT6 1336 aa16.31■□□□□ 0.2
KDM2A-207ENST00000526258 MFAP1P55081 439 aaKnown RBP16.3■□□□□ 0.2
KDM2A-207ENST00000526258 NCBP3Q53F19 620 aaKnown RBP16.3■□□□□ 0.2
KDM2A-207ENST00000526258 CCDC66A2RUB6 948 aa16.3■□□□□ 0.2
KDM2A-207ENST00000526258 EEA1Q15075 1411 aa16.3■□□□□ 0.2
KDM2A-207ENST00000526258 DDX49Q9Y6V7 483 aaKnown RBP16.3■□□□□ 0.2
KDM2A-207ENST00000526258 R3HCC1Q9Y3T6 440 aaKnown RBP16.3■□□□□ 0.2
KDM2A-207ENST00000526258 TEX35Q5T0J7 233 aa16.29■□□□□ 0.2
KDM2A-207ENST00000526258 FAM161AQ3B820 660 aa16.29■□□□□ 0.2
KDM2A-207ENST00000526258 PHF14O94880 888 aa16.28■□□□□ 0.2
KDM2A-207ENST00000526258 PDE4CQ08493 712 aa16.28■□□□□ 0.2
KDM2A-207ENST00000526258 KCNH8Q96L42 1107 aa16.28■□□□□ 0.2
KDM2A-207ENST00000526258 PLPPR3Q6T4P5 718 aa16.27■□□□□ 0.2
KDM2A-207ENST00000526258 PLEKHG5O94827 1062 aa16.27■□□□□ 0.19
KDM2A-207ENST00000526258 ZMYND15Q9H091 742 aa16.26■□□□□ 0.19
KDM2A-207ENST00000526258 RRP7BPQ9NSQ0 103 aa16.26■□□□□ 0.19
KDM2A-207ENST00000526258 CARD11Q9BXL7 1154 aa16.25■□□□□ 0.19
KDM2A-207ENST00000526258 RWDD1Q9H446 243 aaPredicted RBP16.25■□□□□ 0.19
KDM2A-207ENST00000526258 NOM1Q5C9Z4 860 aaKnown RBP16.25■□□□□ 0.19
KDM2A-207ENST00000526258 TSPY4P0CV99 314 aa16.25■□□□□ 0.19
KDM2A-207ENST00000526258 TSPY10P0CW01 314 aa16.25■□□□□ 0.19
KDM2A-207ENST00000526258 MRE11P49959 708 aa16.25■□□□□ 0.19
KDM2A-207ENST00000526258 FOXD4L1Q9NU39 408 aa16.24■□□□□ 0.19
KDM2A-207ENST00000526258 CLSTN1O94985 981 aa16.24■□□□□ 0.19
KDM2A-207ENST00000526258 RBM10P98175 930 aaKnown RBP16.24■□□□□ 0.19
KDM2A-207ENST00000526258 GPS2Q13227 327 aa16.24■□□□□ 0.19
KDM2A-207ENST00000526258 SENP3Q9H4L4 574 aaPredicted RBP16.23■□□□□ 0.19
KDM2A-207ENST00000526258 CDCA8Q53HL2 280 aa16.23■□□□□ 0.19
KDM2A-207ENST00000526258 GNL2Q13823 731 aaKnown RBP16.22■□□□□ 0.19
KDM2A-207ENST00000526258 RGL3Q3MIN7 710 aa16.22■□□□□ 0.19
KDM2A-207ENST00000526258 C14orf37Q86TY3 774 aa16.22■□□□□ 0.19
KDM2A-207ENST00000526258 TPM4P67936 248 aa16.22■□□□□ 0.19
KDM2A-207ENST00000526258 CC2D1BQ5T0F9 858 aaKnown RBP16.22■□□□□ 0.19
KDM2A-207ENST00000526258 MTUS2Q5JR59 1369 aa16.2■□□□□ 0.18
KDM2A-207ENST00000526258 PAK3O75914 559 aaPredicted RBP16.2■□□□□ 0.18
KDM2A-207ENST00000526258 PMFBP1Q8TBY8 1022 aa16.2■□□□□ 0.18
KDM2A-207ENST00000526258 PATL2C9JE40 543 aaKnown RBP16.2■□□□□ 0.18
KDM2A-207ENST00000526258 HSPA5P11021 654 aaKnown RBP16.19■□□□□ 0.18
KDM2A-207ENST00000526258 CENPQQ7L2Z9 268 aaPredicted RBP16.17■□□□□ 0.18
KDM2A-207ENST00000526258 APBB1O00213 710 aa16.17■□□□□ 0.18
KDM2A-207ENST00000526258 CHMP5Q9NZZ3 219 aa16.16■□□□□ 0.18
KDM2A-207ENST00000526258 ZNF592Q92610 1267 aa16.16■□□□□ 0.18
KDM2A-207ENST00000526258 KIAA1211Q6ZU35 1233 aa16.16■□□□□ 0.18
KDM2A-207ENST00000526258 PABPN1Q86U42 306 aaKnown RBP eCLIP16.15■□□□□ 0.18
KDM2A-207ENST00000526258 GOLGA3Q08378 1498 aa16.15■□□□□ 0.18
KDM2A-207ENST00000526258 TNIKQ9UKE5 1360 aa16.15■□□□□ 0.18
KDM2A-207ENST00000526258 U2SURPO15042 1029 aaKnown RBP16.14■□□□□ 0.18
KDM2A-207ENST00000526258 CCAR2Q8N163 923 aaKnown RBP16.14■□□□□ 0.18
KDM2A-207ENST00000526258 DIAPH3Q9NSV4 1193 aa16.14■□□□□ 0.18
KDM2A-207ENST00000526258 TPM3P06753 285 aa16.13■□□□□ 0.17
KDM2A-207ENST00000526258 CWC15Q9P013 229 aaKnown RBP16.13■□□□□ 0.17
KDM2A-207ENST00000526258 EXOC6Q8TAG9 804 aa16.13■□□□□ 0.17
KDM2A-207ENST00000526258 TAF3Q5VWG9 929 aa16.13■□□□□ 0.17
KDM2A-207ENST00000526258 PDE3BQ13370 1112 aa16.12■□□□□ 0.17
KDM2A-207ENST00000526258 NASPP49321 788 aaPredicted RBP16.11■□□□□ 0.17
KDM2A-207ENST00000526258 FRAT2O75474 233 aaPredicted RBP16.1■□□□□ 0.17
KDM2A-207ENST00000526258 KIF16BQ96L93 1317 aa16.1■□□□□ 0.17
KDM2A-207ENST00000526258 MAPK8IP2Q13387 824 aaPredicted RBP16.1■□□□□ 0.17
KDM2A-207ENST00000526258 HSP90B1P14625 803 aaKnown RBP16.1■□□□□ 0.17
KDM2A-207ENST00000526258 HMGN5P82970 282 aaKnown RBP16.09■□□□□ 0.17
KDM2A-207ENST00000526258 CCDC39Q9UFE4 941 aa16.09■□□□□ 0.17
KDM2A-207ENST00000526258 ST18O60284 1047 aa16.08■□□□□ 0.17
KDM2A-207ENST00000526258 FOXD4L5Q5VV16 416 aaPredicted RBP16.08■□□□□ 0.17
KDM2A-207ENST00000526258 FOXD4L4Q8WXT5 416 aaPredicted RBP16.08■□□□□ 0.17
KDM2A-207ENST00000526258 ZBED9Q6R2W3 1325 aa16.08■□□□□ 0.17
KDM2A-207ENST00000526258 RRP1P56182 461 aaKnown RBP16.08■□□□□ 0.16
KDM2A-207ENST00000526258 MSH5O43196 834 aa16.08■□□□□ 0.16
KDM2A-207ENST00000526258 GOLGA2Q08379 1002 aa16.08■□□□□ 0.16
KDM2A-207ENST00000526258 ARGLU1Q9NWB6 273 aaPredicted RBP16.08■□□□□ 0.16
KDM2A-207ENST00000526258 NOL8Q76FK4 1167 aaKnown RBP16.07■□□□□ 0.16
KDM2A-207ENST00000526258 CREBRFQ8IUR6 639 aa16.07■□□□□ 0.16
KDM2A-207ENST00000526258 CCNB3Q8WWL7 1395 aa16.06■□□□□ 0.16
KDM2A-207ENST00000526258 IPO8O15397 1037 aaKnown RBP16.05■□□□□ 0.16
KDM2A-207ENST00000526258 PDCL3Q9H2J4 239 aa16.05■□□□□ 0.16
KDM2A-207ENST00000526258 KTN1Q86UP2 1357 aaKnown RBP16.05■□□□□ 0.16
KDM2A-207ENST00000526258 RALBP1Q15311 655 aa16.05■□□□□ 0.16
KDM2A-207ENST00000526258 ITPRIPQ8IWB1 547 aa16.05■□□□□ 0.16
KDM2A-207ENST00000526258 ESPNB1AK53 854 aa16.04■□□□□ 0.16
KDM2A-207ENST00000526258 TRAK2O60296 914 aa16.04■□□□□ 0.16
KDM2A-207ENST00000526258 CCDC173Q0VFZ6 552 aa16.04■□□□□ 0.16
KDM2A-207ENST00000526258 GOLGA6L19H0YKK7 550 aa16.03■□□□□ 0.16
KDM2A-207ENST00000526258 CCDC34Q96HJ3 373 aa16.03■□□□□ 0.16
KDM2A-207ENST00000526258 TAF7LQ5H9L4 462 aa16.03■□□□□ 0.16
KDM2A-207ENST00000526258 ZCCHC6Q5VYS8 1495 aaKnown RBP16.03■□□□□ 0.16
KDM2A-207ENST00000526258 PPP1R15AO75807 674 aaPredicted RBP16.03■□□□□ 0.16
KDM2A-207ENST00000526258 UQCRHLA0A096LP55 91 aa16.03■□□□□ 0.16
KDM2A-207ENST00000526258 UQCRHP07919 91 aa16.03■□□□□ 0.16
KDM2A-207ENST00000526258 RDXP35241 583 aaKnown RBP16.01■□□□□ 0.15
KDM2A-207ENST00000526258 BBXQ8WY36 941 aaPredicted RBP16.01■□□□□ 0.15
KDM2A-207ENST00000526258 ISY1Q9ULR0 285 aaKnown RBP16.01■□□□□ 0.15
KDM2A-207ENST00000526258 CRBNQ96SW2 442 aa16.01■□□□□ 0.15
KDM2A-207ENST00000526258 PRM3Q9NNZ6 103 aa16■□□□□ 0.15
KDM2A-207ENST00000526258 IFT57Q9NWB7 429 aa16■□□□□ 0.15
KDM2A-207ENST00000526258 AEBP1Q8IUX7 1158 aa16■□□□□ 0.15
KDM2A-207ENST00000526258 BECN2A8MW95 431 aa16■□□□□ 0.15
KDM2A-207ENST00000526258 PRDM10Q9NQV6 1147 aa15.99■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 15.1 ms