RNA–Protein interactions for RNA: ENST00000526191.1

COPB1-204, Transcript of coatomer protein complex subunit beta 1, humanhuman

TSL 2

Gene COPB1, Length 697 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPB1-204ENST00000526191 ST18O60284 1047 aa15.27■□□□□ 0.04
COPB1-204ENST00000526191 HOXB3P14651 431 aaPredicted RBP15.27■□□□□ 0.04
COPB1-204ENST00000526191 ZBTB4Q9P1Z0 1013 aaPredicted RBP15.27■□□□□ 0.04
COPB1-204ENST00000526191 TMC2Q8TDI7 906 aa15.24■□□□□ 0.03
COPB1-204ENST00000526191 SPRYD3Q8NCJ5 442 aa15.22■□□□□ 0.03
COPB1-204ENST00000526191 PAXIP1Q6ZW49 1069 aaPredicted RBP15.21■□□□□ 0.03
COPB1-204ENST00000526191 CFAP44Q96MT7 982 aa15.2■□□□□ 0.02
COPB1-204ENST00000526191 DOK7Q18PE1 504 aa15.18■□□□□ 0.02
COPB1-204ENST00000526191 POTEMA6NI47 508 aa15.17■□□□□ 0.02
COPB1-204ENST00000526191 POTEGQ6S5H5 508 aa15.16■□□□□ 0.02
COPB1-204ENST00000526191 CADPS2Q86UW7 1296 aa15.16■□□□□ 0.02
COPB1-204ENST00000526191 GPHNQ9NQX3 736 aaPredicted RBP15.16■□□□□ 0.02
COPB1-204ENST00000526191 CRISPLD2Q9H0B8 497 aa15.15■□□□□ 0.02
COPB1-204ENST00000526191 NCKAP5LQ9HCH0 1330 aa15.14■□□□□ 0.01
COPB1-204ENST00000526191 ZNF710Q8N1W2 664 aa15.13■□□□□ 0.01
COPB1-204ENST00000526191 DSG2Q14126 1118 aa15.12■□□□□ 0.01
COPB1-204ENST00000526191 MARVELD3Q96A59 401 aa15.12■□□□□ 0.01
COPB1-204ENST00000526191 FOXK1P85037 733 aa15.11■□□□□ 0.01
COPB1-204ENST00000526191 PLPP6Q8IY26 295 aa15.09■□□□□ 0.01
COPB1-204ENST00000526191 RIMBP2O15034 1052 aa15.08■□□□□ 0
COPB1-204ENST00000526191 HOXB1P14653 301 aaPredicted RBP15.06■□□□□ 0
COPB1-204ENST00000526191 PDE4AP27815 886 aa15.06■□□□□ 0
COPB1-204ENST00000526191 LARP6Q9BRS8 491 aaKnown RBP15.05■□□□□ -0
COPB1-204ENST00000526191 GPR153Q6NV75 609 aa15.04■□□□□ -0
COPB1-204ENST00000526191 EMP3P54852 163 aa15.03■□□□□ -0
COPB1-204ENST00000526191 PPP1R15BQ5SWA1 713 aa15.03■□□□□ -0
COPB1-204ENST00000526191 ZSWIM6Q9HCJ5 1215 aa15.03■□□□□ -0
COPB1-204ENST00000526191 ARSIQ5FYB1 569 aa15.02■□□□□ -0
COPB1-204ENST00000526191 KHSRPQ92945 711 aaKnown RBP eCLIP15.02■□□□□ -02e-9■■■□□ 16.3
COPB1-204ENST00000526191 SLC34A2O95436 690 aa15.01□□□□□ -0.01
COPB1-204ENST00000526191 MFSD10Q14728 455 aa14.98□□□□□ -0.01
COPB1-204ENST00000526191 DDX27Q96GQ7 796 aaKnown RBP14.98□□□□□ -0.01
COPB1-204ENST00000526191 PCDHGA4Q9Y5G9 962 aa14.98□□□□□ -0.01
COPB1-204ENST00000526191 POTEB3A0JP26 581 aa14.95□□□□□ -0.02
COPB1-204ENST00000526191 FAM205CA6NFA0 338 aa14.95□□□□□ -0.02
COPB1-204ENST00000526191 POTEBQ6S5H4 581 aa14.95□□□□□ -0.02
COPB1-204ENST00000526191 PTCD2Q8WV60 388 aaKnown RBP14.93□□□□□ -0.02
COPB1-204ENST00000526191 NUDT7P0C024 238 aa14.92□□□□□ -0.02
COPB1-204ENST00000526191 UPF1Q92900 1129 aaKnown RBP eCLIP14.92□□□□□ -0.02
COPB1-204ENST00000526191 TSHZ2Q9NRE2 1034 aa14.92□□□□□ -0.02
COPB1-204ENST00000526191 HS3ST6Q96QI5 342 aa14.91□□□□□ -0.02
COPB1-204ENST00000526191 ERBB3P21860 1342 aa14.89□□□□□ -0.03
COPB1-204ENST00000526191 CDAN1Q8IWY9 1227 aa14.88□□□□□ -0.03
COPB1-204ENST00000526191 OXER1Q8TDS5 423 aa14.88□□□□□ -0.03
COPB1-204ENST00000526191 PLCB2Q00722 1185 aa14.87□□□□□ -0.03
COPB1-204ENST00000526191 VARS2Q5ST30 1063 aaKnown RBP14.84□□□□□ -0.03
COPB1-204ENST00000526191 EMILIN3Q9NT22 766 aa14.84□□□□□ -0.03
COPB1-204ENST00000526191 KDM4FA0A1W2PPD8 638 aa14.83□□□□□ -0.04
COPB1-204ENST00000526191 ZNF316A6NFI3 1004 aaPredicted RBP14.83□□□□□ -0.04
COPB1-204ENST00000526191 TBC1D12O60347 775 aa14.81□□□□□ -0.04
COPB1-204ENST00000526191 LHX6Q9UPM6 363 aa14.81□□□□□ -0.04
COPB1-204ENST00000526191 CAMK2BQ13554 666 aa14.79□□□□□ -0.04
COPB1-204ENST00000526191 PCDH10Q9P2E7 1040 aa14.79□□□□□ -0.04
COPB1-204ENST00000526191 WDR70Q9NW82 654 aa14.74□□□□□ -0.05
COPB1-204ENST00000526191 MAP3K9P80192 1104 aa14.73□□□□□ -0.05
COPB1-204ENST00000526191 KRTAP3-3Q9BYR6 98 aa14.71□□□□□ -0.05
COPB1-204ENST00000526191 KRTAP3-2Q9BYR7 98 aa14.71□□□□□ -0.05
COPB1-204ENST00000526191 DPYSL4O14531 572 aa14.7□□□□□ -0.06
COPB1-204ENST00000526191 EVI5O60447 810 aa14.7□□□□□ -0.06
COPB1-204ENST00000526191 ZNF687Q8N1G0 1237 aa14.7□□□□□ -0.06
COPB1-204ENST00000526191 E2F4Q16254 413 aa14.69□□□□□ -0.06
COPB1-204ENST00000526191 HAP1P54257 671 aaPredicted RBP14.68□□□□□ -0.06
COPB1-204ENST00000526191 ANO8Q9HCE9 1232 aaPredicted RBP14.65□□□□□ -0.06
COPB1-204ENST00000526191 PSDA5PKW4 1024 aaPredicted RBP14.62□□□□□ -0.07
COPB1-204ENST00000526191 POTEEQ6S8J3 1075 aa14.62□□□□□ -0.07
COPB1-204ENST00000526191 PPP4R3BQ5MIZ7 849 aa14.59□□□□□ -0.07
COPB1-204ENST00000526191 ZNF454Q8N9F8 522 aa14.59□□□□□ -0.07
COPB1-204ENST00000526191 FOSBP53539 338 aa14.58□□□□□ -0.08
COPB1-204ENST00000526191 AXIN2Q9Y2T1 843 aa14.58□□□□□ -0.08
COPB1-204ENST00000526191 PLSCR2Q9NRY7 297 aa14.56□□□□□ -0.08
COPB1-204ENST00000526191 PDIA6Q15084 440 aa14.54□□□□□ -0.08
COPB1-204ENST00000526191 KCNV2Q8TDN2 545 aa14.54□□□□□ -0.08
COPB1-204ENST00000526191 JPH4Q96JJ6 628 aa14.54□□□□□ -0.08
COPB1-204ENST00000526191 ARIH1Q9Y4X5 557 aaPredicted RBP14.54□□□□□ -0.08
COPB1-204ENST00000526191 PBX2P40425 430 aa14.51□□□□□ -0.09
COPB1-204ENST00000526191 PCDHGA10Q9Y5H3 936 aa14.51□□□□□ -0.09
COPB1-204ENST00000526191 PSEN2P49810 448 aa14.5□□□□□ -0.09
COPB1-204ENST00000526191 SPNS2Q8IVW8 549 aa14.5□□□□□ -0.09
COPB1-204ENST00000526191 KDM2AQ9Y2K7 1162 aa14.5□□□□□ -0.09
COPB1-204ENST00000526191 SPDYE16A6NNV3 312 aaPredicted RBP14.49□□□□□ -0.09
COPB1-204ENST00000526191 LSM11P83369 360 aaKnown RBP eCLIP14.49□□□□□ -0.09
COPB1-204ENST00000526191 ARHGAP33O14559 1287 aa14.48□□□□□ -0.09
COPB1-204ENST00000526191 DDX12PQ92771 950 aa14.48□□□□□ -0.09
COPB1-204ENST00000526191 ZDHHC16Q969W1 377 aa14.48□□□□□ -0.09
COPB1-204ENST00000526191 ADAM33Q9BZ11 813 aa14.48□□□□□ -0.09
COPB1-204ENST00000526191 ANKRD13DQ6ZTN6 518 aa14.47□□□□□ -0.09
COPB1-204ENST00000526191 PHF14O94880 888 aa14.46□□□□□ -0.09
COPB1-204ENST00000526191 PTGER2P43116 358 aa14.46□□□□□ -0.09
COPB1-204ENST00000526191 DMRTA1Q5VZB9 504 aa14.46□□□□□ -0.09
COPB1-204ENST00000526191 KCNK17Q96T54 332 aa14.46□□□□□ -0.09
COPB1-204ENST00000526191 BCL2L12Q9HB09 334 aa14.46□□□□□ -0.09
COPB1-204ENST00000526191 ARHGEF1Q92888 912 aaKnown RBP14.44□□□□□ -0.1
COPB1-204ENST00000526191 TYW1BQ6NUM6 668 aa14.43□□□□□ -0.1
COPB1-204ENST00000526191 P3H3Q8IVL6 736 aa14.4□□□□□ -0.1
COPB1-204ENST00000526191 PTPREP23469 700 aa14.39□□□□□ -0.11
COPB1-204ENST00000526191 FBXW7Q969H0 707 aa14.39□□□□□ -0.11
COPB1-204ENST00000526191 EPAS1Q99814 870 aa14.39□□□□□ -0.11
COPB1-204ENST00000526191 GRXCR2A6NFK2 248 aa14.38□□□□□ -0.11
COPB1-204ENST00000526191 MMRN1Q13201 1228 aa14.38□□□□□ -0.11
COPB1-204ENST00000526191 NBR1Q14596 966 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 8.3 ms