RNA–Protein interactions for RNA: ENST00000526141.1

TRAPPC4-207, Transcript of trafficking protein particle complex 4, humanhuman

TSL 3

Gene TRAPPC4, Length 392 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC4-207ENST00000526141 GPR153Q6NV75 609 aa7.42□□□□□ -1.22
TRAPPC4-207ENST00000526141 ZFP91Q96JP5 570 aaPredicted RBP7.42□□□□□ -1.22
TRAPPC4-207ENST00000526141 TMEM92Q6UXU6 159 aa7.41□□□□□ -1.22
TRAPPC4-207ENST00000526141 MYT1LQ9UL68 1186 aa7.41□□□□□ -1.22
TRAPPC4-207ENST00000526141 PHF8Q9UPP1 1060 aa7.4□□□□□ -1.22
TRAPPC4-207ENST00000526141 NLRP6P59044 892 aa7.39□□□□□ -1.23
TRAPPC4-207ENST00000526141 MS4A4AQ96JQ5 239 aa7.39□□□□□ -1.23
TRAPPC4-207ENST00000526141 RNF25Q96BH1 459 aaPredicted RBP7.38□□□□□ -1.23
TRAPPC4-207ENST00000526141 ARSIQ5FYB1 569 aa7.36□□□□□ -1.23
TRAPPC4-207ENST00000526141 ZNF316A6NFI3 1004 aaPredicted RBP7.34□□□□□ -1.23
TRAPPC4-207ENST00000526141 ANKRD13DQ6ZTN6 518 aa7.33□□□□□ -1.24
TRAPPC4-207ENST00000526141 BCL11BQ9C0K0 894 aaPredicted RBP7.33□□□□□ -1.24
TRAPPC4-207ENST00000526141 FBXO22Q8NEZ5 403 aa7.32□□□□□ -1.24
TRAPPC4-207ENST00000526141 STK24Q9Y6E0 443 aa7.31□□□□□ -1.24
TRAPPC4-207ENST00000526141 PBX2P40425 430 aa7.29□□□□□ -1.24
TRAPPC4-207ENST00000526141 LSM11P83369 360 aaKnown RBP eCLIP7.29□□□□□ -1.24
TRAPPC4-207ENST00000526141 KHSRPQ92945 711 aaKnown RBP eCLIP7.28□□□□□ -1.24
TRAPPC4-207ENST00000526141 STK25O00506 426 aa7.27□□□□□ -1.25
TRAPPC4-207ENST00000526141 KIF3CO14782 793 aa7.27□□□□□ -1.25
TRAPPC4-207ENST00000526141 MFRPQ9BY79 579 aa7.27□□□□□ -1.25
TRAPPC4-207ENST00000526141 C2orf72A6NCS6 295 aa7.26□□□□□ -1.25
TRAPPC4-207ENST00000526141 SLC34A2O95436 690 aa7.26□□□□□ -1.25
TRAPPC4-207ENST00000526141 NUDT7P0C024 238 aa7.25□□□□□ -1.25
TRAPPC4-207ENST00000526141 TMC2Q8TDI7 906 aa7.25□□□□□ -1.25
TRAPPC4-207ENST00000526141 PSDA5PKW4 1024 aaPredicted RBP7.23□□□□□ -1.25
TRAPPC4-207ENST00000526141 PCDHGA4Q9Y5G9 962 aa7.23□□□□□ -1.25
TRAPPC4-207ENST00000526141 ECM2O94769 699 aaPredicted RBP7.22□□□□□ -1.25
TRAPPC4-207ENST00000526141 LHX6Q9UPM6 363 aa7.22□□□□□ -1.25
TRAPPC4-207ENST00000526141 HCSTQ9UBK5 93 aa7.2□□□□□ -1.26
TRAPPC4-207ENST00000526141 ARHGAP33O14559 1287 aa7.18□□□□□ -1.26
TRAPPC4-207ENST00000526141 AXIN2Q9Y2T1 843 aa7.18□□□□□ -1.26
TRAPPC4-207ENST00000526141 ADGRD1Q6QNK2 874 aa7.16□□□□□ -1.26
TRAPPC4-207ENST00000526141 POTEEQ6S8J3 1075 aa7.16□□□□□ -1.26
TRAPPC4-207ENST00000526141 PLA2G2EQ9NZK7 142 aa7.16□□□□□ -1.26
TRAPPC4-207ENST00000526141 TK2O00142 265 aa7.15□□□□□ -1.26
TRAPPC4-207ENST00000526141 TBC1D12O60347 775 aa7.14□□□□□ -1.27
TRAPPC4-207ENST00000526141 PTCD2Q8WV60 388 aaKnown RBP7.14□□□□□ -1.27
TRAPPC4-207ENST00000526141 STAC3Q96MF2 364 aa7.13□□□□□ -1.27
TRAPPC4-207ENST00000526141 RGL2O15211 777 aa7.12□□□□□ -1.27
TRAPPC4-207ENST00000526141 KCNH8Q96L42 1107 aa7.12□□□□□ -1.27
TRAPPC4-207ENST00000526141 FOXK1P85037 733 aa7.11□□□□□ -1.27
TRAPPC4-207ENST00000526141 PKD2Q13563 968 aa7.11□□□□□ -1.27
TRAPPC4-207ENST00000526141 PPP4R3BQ5MIZ7 849 aa7.11□□□□□ -1.27
TRAPPC4-207ENST00000526141 KDM4FA0A1W2PPD8 638 aa7.1□□□□□ -1.27
TRAPPC4-207ENST00000526141 PPP1R37O75864 691 aa7.1□□□□□ -1.27
TRAPPC4-207ENST00000526141 HRO43593 1189 aa7.09□□□□□ -1.27
TRAPPC4-207ENST00000526141 PLPP6Q8IY26 295 aa7.09□□□□□ -1.27
TRAPPC4-207ENST00000526141 GPHNQ9NQX3 736 aaPredicted RBP7.09□□□□□ -1.27
TRAPPC4-207ENST00000526141 DMRTA1Q5VZB9 504 aa7.07□□□□□ -1.28
TRAPPC4-207ENST00000526141 PSEN2P49810 448 aa7.06□□□□□ -1.28
TRAPPC4-207ENST00000526141 KCTD12Q96CX2 325 aaKnown RBP7.05□□□□□ -1.28
TRAPPC4-207ENST00000526141 DSG2Q14126 1118 aa7.03□□□□□ -1.28
TRAPPC4-207ENST00000526141 HS6ST3Q8IZP7 471 aa7.03□□□□□ -1.28
TRAPPC4-207ENST00000526141 KCNK17Q96T54 332 aa7.02□□□□□ -1.29
TRAPPC4-207ENST00000526141 RYDENQ9NUL5 291 aaKnown RBP7.02□□□□□ -1.29
TRAPPC4-207ENST00000526141 SLC24A1O60721 1099 aa7□□□□□ -1.29
TRAPPC4-207ENST00000526141 SLC4A5Q9BY07 1137 aa7□□□□□ -1.29
TRAPPC4-207ENST00000526141 VPS9D1Q9Y2B5 631 aa7□□□□□ -1.29
TRAPPC4-207ENST00000526141 RGS20O76081 388 aa6.99□□□□□ -1.29
TRAPPC4-207ENST00000526141 OXER1Q8TDS5 423 aa6.99□□□□□ -1.29
TRAPPC4-207ENST00000526141 PTPN5P54829 565 aa6.98□□□□□ -1.29
TRAPPC4-207ENST00000526141 ZNF454Q8N9F8 522 aa6.98□□□□□ -1.29
TRAPPC4-207ENST00000526141 BCL2L12Q9HB09 334 aa6.98□□□□□ -1.29
TRAPPC4-207ENST00000526141 GOLGA8CPA6NN73 597 aa6.97□□□□□ -1.29
TRAPPC4-207ENST00000526141 IFFO2Q5TF58 517 aa6.97□□□□□ -1.29
TRAPPC4-207ENST00000526141 CHGAP10645 457 aaKnown RBP6.96□□□□□ -1.3
TRAPPC4-207ENST00000526141 PTPREP23469 700 aa6.96□□□□□ -1.3
TRAPPC4-207ENST00000526141 UPF1Q92900 1129 aaKnown RBP eCLIP6.96□□□□□ -1.3
TRAPPC4-207ENST00000526141 PPP1R15BQ5SWA1 713 aa6.94□□□□□ -1.3
TRAPPC4-207ENST00000526141 CRISPLD2Q9H0B8 497 aa6.94□□□□□ -1.3
TRAPPC4-207ENST00000526141 DNAJC5Q9H3Z4 198 aa6.94□□□□□ -1.3
TRAPPC4-207ENST00000526141 BHMG1C9JSJ3 638 aaPredicted RBP6.93□□□□□ -1.3
TRAPPC4-207ENST00000526141 PDE4AP27815 886 aa6.93□□□□□ -1.3
TRAPPC4-207ENST00000526141 FOSBP53539 338 aa6.93□□□□□ -1.3
TRAPPC4-207ENST00000526141 THSD4Q6ZMP0 1018 aa6.93□□□□□ -1.3
TRAPPC4-207ENST00000526141 MRPL50Q8N5N7 158 aaKnown RBP6.93□□□□□ -1.3
TRAPPC4-207ENST00000526141 WNT2BQ93097 391 aa6.92□□□□□ -1.3
TRAPPC4-207ENST00000526141 NBPF3Q9H094 633 aa6.92□□□□□ -1.3
TRAPPC4-207ENST00000526141 ANO8Q9HCE9 1232 aaPredicted RBP6.92□□□□□ -1.3
TRAPPC4-207ENST00000526141 JPH4Q96JJ6 628 aa6.91□□□□□ -1.3
TRAPPC4-207ENST00000526141 ZBED2Q9BTP6 218 aa6.91□□□□□ -1.3
TRAPPC4-207ENST00000526141 ZDHHC16Q969W1 377 aa6.9□□□□□ -1.3
TRAPPC4-207ENST00000526141 IRX2Q9BZI1 471 aaPredicted RBP6.9□□□□□ -1.3
TRAPPC4-207ENST00000526141 EVI5O60447 810 aa6.89□□□□□ -1.31
TRAPPC4-207ENST00000526141 A0A0G2JS52 829 aa6.88□□□□□ -1.31
TRAPPC4-207ENST00000526141 MAP3K9P80192 1104 aa6.87□□□□□ -1.31
TRAPPC4-207ENST00000526141 NKX1-1Q15270 411 aaPredicted RBP6.87□□□□□ -1.31
TRAPPC4-207ENST00000526141 ADAM33Q9BZ11 813 aa6.86□□□□□ -1.31
TRAPPC4-207ENST00000526141 NCKAP5LQ9HCH0 1330 aa6.85□□□□□ -1.31
TRAPPC4-207ENST00000526141 DDX27Q96GQ7 796 aaKnown RBP6.85□□□□□ -1.31
TRAPPC4-207ENST00000526141 PPP1R3GB7ZBB8 358 aa6.84□□□□□ -1.31
TRAPPC4-207ENST00000526141 ANKK1Q8NFD2 765 aa6.84□□□□□ -1.31
TRAPPC4-207ENST00000526141 LARP6Q9BRS8 491 aaKnown RBP6.84□□□□□ -1.31
TRAPPC4-207ENST00000526141 RABGEF1Q9UJ41 708 aa6.84□□□□□ -1.31
TRAPPC4-207ENST00000526141 NYAP1Q6ZVC0 841 aa6.82□□□□□ -1.32
TRAPPC4-207ENST00000526141 LAPTM4BQ86VI4 370 aa6.82□□□□□ -1.32
TRAPPC4-207ENST00000526141 FBXW7Q969H0 707 aa6.82□□□□□ -1.32
TRAPPC4-207ENST00000526141 ITGBL1O95965 494 aaPredicted RBP6.8□□□□□ -1.32
TRAPPC4-207ENST00000526141 MFSD10Q14728 455 aa6.8□□□□□ -1.32
TRAPPC4-207ENST00000526141 TYW1BQ6NUM6 668 aa6.8□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 13.7 ms