RNA–Protein interactions for RNA: ENST00000525725.5

PACSIN3-203, Transcript of protein kinase C and casein kinase substrate in neurons 3, humanhuman

TSL 2

Gene PACSIN3, Length 683 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PACSIN3-203ENST00000525725 PTPRMP28827 1452 aa34.85■■■■□ 3.17
PACSIN3-203ENST00000525725 CCDC18Q5T9S5 1454 aa34.84■■■■□ 3.17
PACSIN3-203ENST00000525725 PREX2Q70Z35 1606 aa34.81■■■■□ 3.16
PACSIN3-203ENST00000525725 CDC42BPBQ9Y5S2 1711 aa34.81■■■■□ 3.16
PACSIN3-203ENST00000525725 FYCO1Q9BQS8 1478 aa34.81■■■■□ 3.16
PACSIN3-203ENST00000525725 CLIP1P30622 1438 aa34.8■■■■□ 3.16
PACSIN3-203ENST00000525725 YEATS2Q9ULM3 1422 aa34.8■■■■□ 3.16
PACSIN3-203ENST00000525725 KDM5CP41229 1560 aa34.79■■■■□ 3.16
PACSIN3-203ENST00000525725 CDK11AQ9UQ88 783 aaPredicted RBP34.77■■■■□ 3.16
PACSIN3-203ENST00000525725 RIMS1Q86UR5 1692 aaKnown RBP34.76■■■■□ 3.16
PACSIN3-203ENST00000525725 SCAPERQ9BY12 1400 aa34.76■■■■□ 3.16
PACSIN3-203ENST00000525725 ARHGAP5Q13017 1502 aa34.73■■■■□ 3.15
PACSIN3-203ENST00000525725 CDC42BPAQ5VT25 1732 aa34.71■■■■□ 3.15
PACSIN3-203ENST00000525725 ATP1B4Q9UN42 357 aaPredicted RBP34.7■■■■□ 3.15
PACSIN3-203ENST00000525725 ZNF518AQ6AHZ1 1483 aa34.7■■■■□ 3.15
PACSIN3-203ENST00000525725 FER1L4A9Z1Z3 1794 aa34.67■■■■□ 3.14
PACSIN3-203ENST00000525725 ABCC1P33527 1531 aa34.67■■■■□ 3.14
PACSIN3-203ENST00000525725 ITSN2Q9NZM3 1697 aa34.66■■■■□ 3.14
PACSIN3-203ENST00000525725 EFCAB2Q5VUJ9 269 aa34.64■■■■□ 3.14
PACSIN3-203ENST00000525725 C9orf84Q5VXU9 1444 aa34.61■■■■□ 3.13
PACSIN3-203ENST00000525725 REREQ9P2R6 1566 aa34.61■■■■□ 3.13
PACSIN3-203ENST00000525725 DIP2CQ9Y2E4 1556 aa34.6■■■■□ 3.13
PACSIN3-203ENST00000525725 ARHGEF12Q9NZN5 1544 aa34.6■■■■□ 3.13
PACSIN3-203ENST00000525725 ARID4BQ4LE39 1312 aaPredicted RBP34.59■■■■□ 3.13
PACSIN3-203ENST00000525725 ATP10AO60312 1499 aa34.58■■■■□ 3.13
PACSIN3-203ENST00000525725 LMTK3Q96Q04 1460 aa34.58■■■■□ 3.13
PACSIN3-203ENST00000525725 ABCA6Q8N139 1617 aa34.57■■■■□ 3.12
PACSIN3-203ENST00000525725 MLH3Q9UHC1 1453 aa34.52■■■■□ 3.12
PACSIN3-203ENST00000525725 SAMD9LQ8IVG5 1584 aa34.49■■■■□ 3.11
PACSIN3-203ENST00000525725 KIDINS220Q9ULH0 1771 aa34.47■■■■□ 3.11
PACSIN3-203ENST00000525725 TRAPPC8Q9Y2L5 1435 aa34.45■■■■□ 3.11
PACSIN3-203ENST00000525725 GPATCH8Q9UKJ3 1502 aaKnown RBP34.41■■■■□ 3.1
PACSIN3-203ENST00000525725 AGLP35573 1532 aa34.4■■■■□ 3.1
PACSIN3-203ENST00000525725 AFAP1Q8N556 730 aa34.4■■■■□ 3.1
PACSIN3-203ENST00000525725 SYCP2Q9BX26 1530 aa34.39■■■■□ 3.1
PACSIN3-203ENST00000525725 CEP162Q5TB80 1403 aa34.38■■■■□ 3.09
PACSIN3-203ENST00000525725 EHBP1L1Q8N3D4 1523 aa34.36■■■■□ 3.09
PACSIN3-203ENST00000525725 PREX1Q8TCU6 1659 aa34.36■■■■□ 3.09
PACSIN3-203ENST00000525725 TIAM1Q13009 1591 aa34.34■■■■□ 3.09
PACSIN3-203ENST00000525725 INO80Q9ULG1 1556 aaPredicted RBP34.33■■■■□ 3.09
PACSIN3-203ENST00000525725 ILDR1Q86SU0 546 aaPredicted RBP34.28■■■■□ 3.08
PACSIN3-203ENST00000525725 KIAA1107Q9UPP5 1409 aa34.27■■■■□ 3.08
PACSIN3-203ENST00000525725 PLEKHH2Q8IVE3 1493 aa34.27■■■■□ 3.08
PACSIN3-203ENST00000525725 C3P01024 1663 aa34.26■■■■□ 3.08
PACSIN3-203ENST00000525725 MLECQ14165 292 aa34.26■■■■□ 3.08
PACSIN3-203ENST00000525725 PLXNC1O60486 1568 aa34.25■■■■□ 3.07
PACSIN3-203ENST00000525725 ATP7AQ04656 1500 aa34.24■■■■□ 3.07
PACSIN3-203ENST00000525725 MTUS2Q5JR59 1369 aa34.23■■■■□ 3.07
PACSIN3-203ENST00000525725 SETD1BQ9UPS6 1966 aaKnown RBP34.2■■■■□ 3.07
PACSIN3-203ENST00000525725 CCNB3Q8WWL7 1395 aa34.19■■■■□ 3.06
PACSIN3-203ENST00000525725 MROH2AA6NES4 1674 aa34.19■■■■□ 3.06
PACSIN3-203ENST00000525725 SUPT6HQ7KZ85 1726 aaKnown RBP34.15■■■■□ 3.06
PACSIN3-203ENST00000525725 ADGBQ8N7X0 1667 aa34.13■■■■□ 3.05
PACSIN3-203ENST00000525725 MBD5Q9P267 1494 aa34.09■■■■□ 3.05
PACSIN3-203ENST00000525725 HSPA2P54652 639 aa34.09■■■■□ 3.05
PACSIN3-203ENST00000525725 CFDP1Q9UEE9 299 aaPredicted RBP34.09■■■■□ 3.05
PACSIN3-203ENST00000525725 CNTLNQ9NXG0 1405 aa34.08■■■■□ 3.05
PACSIN3-203ENST00000525725 MYT1LQ9UL68 1186 aa34.08■■■■□ 3.05
PACSIN3-203ENST00000525725 ZNF777Q9ULD5 760 aaPredicted RBP34.08■■■■□ 3.05
PACSIN3-203ENST00000525725 STRCQ7RTU9 1775 aa34.08■■■■□ 3.05
PACSIN3-203ENST00000525725 SPAG9O60271 1321 aaKnown RBP34.06■■■■□ 3.04
PACSIN3-203ENST00000525725 PLPPR3Q6T4P5 718 aa34.05■■■■□ 3.04
PACSIN3-203ENST00000525725 NCOA2Q15596 1464 aa34.05■■■■□ 3.04
PACSIN3-203ENST00000525725 VPS8Q8N3P4 1428 aa34.04■■■■□ 3.04
PACSIN3-203ENST00000525725 A2MP01023 1474 aa34.03■■■■□ 3.04
PACSIN3-203ENST00000525725 CEBPAP49715 358 aaPredicted RBP34.03■■■■□ 3.04
PACSIN3-203ENST00000525725 HNRNPMP52272 730 aaKnown RBP eCLIP34.03■■■■□ 3.04
PACSIN3-203ENST00000525725 UHRF1BP1Q6BDS2 1440 aa34.03■■■■□ 3.04
PACSIN3-203ENST00000525725 CLTCQ00610 1675 aaKnown RBP33.99■■■■□ 3.03
PACSIN3-203ENST00000525725 CAMSAP2Q08AD1 1489 aa33.98■■■■□ 3.03
PACSIN3-203ENST00000525725 RTEL1-TNFRSF6BF6WH68 1400 aa33.96■■■■□ 3.03
PACSIN3-203ENST00000525725 ZNF644Q9H582 1327 aaPredicted RBP33.95■■■■□ 3.03
PACSIN3-203ENST00000525725 MAP3K1Q13233 1512 aa33.94■■■■□ 3.02
PACSIN3-203ENST00000525725 NPATQ14207 1427 aa33.94■■■■□ 3.02
PACSIN3-203ENST00000525725 CCDC141Q6ZP82 1450 aa33.94■■■■□ 3.02
PACSIN3-203ENST00000525725 ARHGEF5Q12774 1597 aa33.94■■■■□ 3.02
PACSIN3-203ENST00000525725 ZNF142P52746 1687 aaPredicted RBP33.93■■■■□ 3.02
PACSIN3-203ENST00000525725 LRRC9Q6ZRR7 1453 aa33.93■■■■□ 3.02
PACSIN3-203ENST00000525725 FBXO41Q8TF61 875 aa33.9■■■■□ 3.02
PACSIN3-203ENST00000525725 MYO3AQ8NEV4 1616 aa33.88■■■■□ 3.01
PACSIN3-203ENST00000525725 FAM135AQ9P2D6 1515 aa33.84■■■■□ 3.01
PACSIN3-203ENST00000525725 ESF1Q9H501 851 aaKnown RBP33.82■■■■□ 3
PACSIN3-203ENST00000525725 LOC105371045A0A1W2PR82 267 aa33.8■■■■□ 3
PACSIN3-203ENST00000525725 ZMYM3Q14202 1370 aa33.8■■■■□ 3
PACSIN3-203ENST00000525725 MAST1Q9Y2H9 1570 aa33.8■■■■□ 3
PACSIN3-203ENST00000525725 NCOA1Q15788 1441 aa33.79■■■■□ 3
PACSIN3-203ENST00000525725 PTPRKQ15262 1439 aa33.77■■■■□ 3
PACSIN3-203ENST00000525725 DHX29Q7Z478 1369 aaKnown RBP33.76■■■■□ 3
PACSIN3-203ENST00000525725 PTPRTO14522 1441 aa33.75■■■□□ 2.99
PACSIN3-203ENST00000525725 CEP170BQ9Y4F5 1589 aaPredicted RBP33.75■■■□□ 2.99
PACSIN3-203ENST00000525725 KDM5DQ9BY66 1539 aa33.73■■■□□ 2.99
PACSIN3-203ENST00000525725 CAMSAP1Q5T5Y3 1602 aa33.72■■■□□ 2.99
PACSIN3-203ENST00000525725 RNF17Q9BXT8 1623 aaKnown RBP33.72■■■□□ 2.99
PACSIN3-203ENST00000525725 PPP6R1Q9UPN7 881 aa33.7■■■□□ 2.99
PACSIN3-203ENST00000525725 MYOM3Q5VTT5 1437 aa33.69■■■□□ 2.98
PACSIN3-203ENST00000525725 RSPH4AQ5TD94 716 aa33.68■■■□□ 2.98
PACSIN3-203ENST00000525725 EIF2AK4Q9P2K8 1649 aaKnown RBP33.68■■■□□ 2.98
PACSIN3-203ENST00000525725 CROCC2H7BZ55 1655 aa33.68■■■□□ 2.98
PACSIN3-203ENST00000525725 MIA2Q96PC5 1412 aa33.67■■■□□ 2.98
PACSIN3-203ENST00000525725 PLA2R1Q13018 1463 aa33.66■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 26.1 ms