RNA–Protein interactions for RNA: ENST00000525576.1

NXF1-202, Transcript of nuclear RNA export factor 1, humanhuman

TSL 4

Gene NXF1, Length 572 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NXF1-202ENST00000525576 ARHGAP5Q13017 1502 aa17.96■□□□□ 0.47
NXF1-202ENST00000525576 CDC42BPBQ9Y5S2 1711 aa17.95■□□□□ 0.46
NXF1-202ENST00000525576 DENND4BO75064 1496 aaPredicted RBP17.95■□□□□ 0.46
NXF1-202ENST00000525576 CDC42BPAQ5VT25 1732 aa17.94■□□□□ 0.46
NXF1-202ENST00000525576 ADGRL1O94910 1474 aa17.94■□□□□ 0.46
NXF1-202ENST00000525576 CCNB3Q8WWL7 1395 aa17.93■□□□□ 0.46
NXF1-202ENST00000525576 LRRC9Q6ZRR7 1453 aa17.93■□□□□ 0.46
NXF1-202ENST00000525576 GPATCH8Q9UKJ3 1502 aaKnown RBP17.93■□□□□ 0.46
NXF1-202ENST00000525576 SUPT6HQ7KZ85 1726 aaKnown RBP17.92■□□□□ 0.46
NXF1-202ENST00000525576 RAPGEF3O95398 923 aa17.92■□□□□ 0.46
NXF1-202ENST00000525576 SCAPERQ9BY12 1400 aa17.91■□□□□ 0.46
NXF1-202ENST00000525576 RICTORQ6R327 1708 aa17.9■□□□□ 0.46
NXF1-202ENST00000525576 CFDP1Q9UEE9 299 aaPredicted RBP17.89■□□□□ 0.45
NXF1-202ENST00000525576 FRMPD1Q5SYB0 1578 aa17.88■□□□□ 0.45
NXF1-202ENST00000525576 ITSN2Q9NZM3 1697 aa17.88■□□□□ 0.45
NXF1-202ENST00000525576 NCOA2Q15596 1464 aa17.88■□□□□ 0.45
NXF1-202ENST00000525576 KANK4Q5T7N3 995 aaPredicted RBP17.87■□□□□ 0.45
NXF1-202ENST00000525576 POGZQ7Z3K3 1410 aa17.87■□□□□ 0.45
NXF1-202ENST00000525576 ZMYM4Q5VZL5 1548 aa17.86■□□□□ 0.45
NXF1-202ENST00000525576 ZNF518AQ6AHZ1 1483 aa17.85■□□□□ 0.45
NXF1-202ENST00000525576 MAGI2Q86UL8 1455 aa17.85■□□□□ 0.45
NXF1-202ENST00000525576 PLEKHH2Q8IVE3 1493 aa17.85■□□□□ 0.45
NXF1-202ENST00000525576 ABCC1P33527 1531 aa17.84■□□□□ 0.45
NXF1-202ENST00000525576 KIAA1107Q9UPP5 1409 aa17.83■□□□□ 0.45
NXF1-202ENST00000525576 ILDR1Q86SU0 546 aaPredicted RBP17.83■□□□□ 0.44
NXF1-202ENST00000525576 ZNF777Q9ULD5 760 aaPredicted RBP17.83■□□□□ 0.44
NXF1-202ENST00000525576 SAMD9LQ8IVG5 1584 aa17.82■□□□□ 0.44
NXF1-202ENST00000525576 KDM5CP41229 1560 aa17.8■□□□□ 0.44
NXF1-202ENST00000525576 ARHGEF12Q9NZN5 1544 aa17.79■□□□□ 0.44
NXF1-202ENST00000525576 AFAP1Q8N556 730 aa17.79■□□□□ 0.44
NXF1-202ENST00000525576 ZFYVE16Q7Z3T8 1539 aa17.77■□□□□ 0.44
NXF1-202ENST00000525576 ARHGEF40Q8TER5 1519 aa17.77■□□□□ 0.44
NXF1-202ENST00000525576 TRAPPC8Q9Y2L5 1435 aa17.77■□□□□ 0.44
NXF1-202ENST00000525576 SYCP2Q9BX26 1530 aa17.77■□□□□ 0.43
NXF1-202ENST00000525576 MLH3Q9UHC1 1453 aa17.76■□□□□ 0.43
NXF1-202ENST00000525576 MYOM3Q5VTT5 1437 aa17.76■□□□□ 0.43
NXF1-202ENST00000525576 MIA2Q96PC5 1412 aa17.76■□□□□ 0.43
NXF1-202ENST00000525576 HNRNPMP52272 730 aaKnown RBP eCLIP17.76■□□□□ 0.432e-7■□□□□ 9.4
NXF1-202ENST00000525576 RSPH4AQ5TD94 716 aa17.76■□□□□ 0.43
NXF1-202ENST00000525576 HECW2Q9P2P5 1572 aa17.74■□□□□ 0.43
NXF1-202ENST00000525576 ZNF644Q9H582 1327 aaPredicted RBP17.74■□□□□ 0.43
NXF1-202ENST00000525576 YEATS2Q9ULM3 1422 aa17.73■□□□□ 0.43
NXF1-202ENST00000525576 MYT1LQ9UL68 1186 aa17.73■□□□□ 0.43
NXF1-202ENST00000525576 ATP10AO60312 1499 aa17.73■□□□□ 0.43
NXF1-202ENST00000525576 CAMSAP2Q08AD1 1489 aa17.72■□□□□ 0.43
NXF1-202ENST00000525576 MBD5Q9P267 1494 aa17.72■□□□□ 0.43
NXF1-202ENST00000525576 SPAG9O60271 1321 aaKnown RBP17.71■□□□□ 0.42
NXF1-202ENST00000525576 C9orf84Q5VXU9 1444 aa17.69■□□□□ 0.42
NXF1-202ENST00000525576 ARID4BQ4LE39 1312 aaPredicted RBP17.69■□□□□ 0.42
NXF1-202ENST00000525576 KIDINS220Q9ULH0 1771 aa17.68■□□□□ 0.42
NXF1-202ENST00000525576 ARHGEF5Q12774 1597 aa17.68■□□□□ 0.42
NXF1-202ENST00000525576 RTEL1-TNFRSF6BF6WH68 1400 aa17.67■□□□□ 0.42
NXF1-202ENST00000525576 CCDC141Q6ZP82 1450 aa17.67■□□□□ 0.42
NXF1-202ENST00000525576 REREQ9P2R6 1566 aa17.66■□□□□ 0.42
NXF1-202ENST00000525576 DIP2CQ9Y2E4 1556 aa17.66■□□□□ 0.42
NXF1-202ENST00000525576 ATP7AQ04656 1500 aa17.66■□□□□ 0.42
NXF1-202ENST00000525576 FGD6Q6ZV73 1430 aa17.65■□□□□ 0.42
NXF1-202ENST00000525576 INO80Q9ULG1 1556 aaPredicted RBP17.65■□□□□ 0.42
NXF1-202ENST00000525576 ABCA6Q8N139 1617 aa17.65■□□□□ 0.42
NXF1-202ENST00000525576 TSPY4P0CV99 314 aa17.64■□□□□ 0.41
NXF1-202ENST00000525576 TSPY10P0CW01 314 aa17.64■□□□□ 0.41
NXF1-202ENST00000525576 BCORL1Q5H9F3 1711 aa17.64■□□□□ 0.41
NXF1-202ENST00000525576 PTPN23Q9H3S7 1636 aa17.63■□□□□ 0.41
NXF1-202ENST00000525576 TCOF1Q13428 1488 aaKnown RBP17.63■□□□□ 0.41
NXF1-202ENST00000525576 AGLP35573 1532 aa17.62■□□□□ 0.41
NXF1-202ENST00000525576 ADAMTSL3P82987 1691 aa17.61■□□□□ 0.41
NXF1-202ENST00000525576 SIGLEC1Q9BZZ2 1709 aa17.6■□□□□ 0.41
NXF1-202ENST00000525576 ADGBQ8N7X0 1667 aa17.59■□□□□ 0.41
NXF1-202ENST00000525576 MAST1Q9Y2H9 1570 aa17.57■□□□□ 0.4
NXF1-202ENST00000525576 A2MP01023 1474 aa17.57■□□□□ 0.4
NXF1-202ENST00000525576 PLXNC1O60486 1568 aa17.55■□□□□ 0.4
NXF1-202ENST00000525576 SHANK2Q9UPX8 1470 aa17.55■□□□□ 0.4
NXF1-202ENST00000525576 DNMT1P26358 1616 aaKnown RBP17.54■□□□□ 0.4
NXF1-202ENST00000525576 MLECQ14165 292 aa17.54■□□□□ 0.4
NXF1-202ENST00000525576 ABCC5O15440 1437 aa17.54■□□□□ 0.4
NXF1-202ENST00000525576 DHX29Q7Z478 1369 aaKnown RBP17.53■□□□□ 0.4
NXF1-202ENST00000525576 PPARGC1BQ86YN6 1023 aaKnown RBP17.53■□□□□ 0.4
NXF1-202ENST00000525576 MADDQ8WXG6 1647 aa17.53■□□□□ 0.4
NXF1-202ENST00000525576 DAPK1P53355 1430 aa17.53■□□□□ 0.4
NXF1-202ENST00000525576 CROCC2H7BZ55 1655 aa17.52■□□□□ 0.4
NXF1-202ENST00000525576 FAM50AQ14320 339 aaKnown RBP17.52■□□□□ 0.4
NXF1-202ENST00000525576 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP17.51■□□□□ 0.39
NXF1-202ENST00000525576 FER1L4A9Z1Z3 1794 aa17.51■□□□□ 0.39
NXF1-202ENST00000525576 PTPRMP28827 1452 aa17.5■□□□□ 0.39
NXF1-202ENST00000525576 PPP6R1Q9UPN7 881 aa17.5■□□□□ 0.39
NXF1-202ENST00000525576 RIMS1Q86UR5 1692 aaKnown RBP17.48■□□□□ 0.39
NXF1-202ENST00000525576 ESF1Q9H501 851 aaKnown RBP17.48■□□□□ 0.39
NXF1-202ENST00000525576 CNTLNQ9NXG0 1405 aa17.47■□□□□ 0.39
NXF1-202ENST00000525576 ANKRD30AQ9BXX3 1397 aa17.46■□□□□ 0.39
NXF1-202ENST00000525576 DUOX2Q9NRD8 1548 aa17.46■□□□□ 0.39
NXF1-202ENST00000525576 KIF3BO15066 747 aa17.44■□□□□ 0.38
NXF1-202ENST00000525576 RRBP1Q9P2E9 1410 aaKnown RBP17.44■□□□□ 0.38
NXF1-202ENST00000525576 KIF15Q9NS87 1388 aa17.43■□□□□ 0.38
NXF1-202ENST00000525576 GGT6Q6P531 493 aa17.43■□□□□ 0.38
NXF1-202ENST00000525576 NCOA1Q15788 1441 aa17.43■□□□□ 0.38
NXF1-202ENST00000525576 ADGRL2O95490 1459 aa17.43■□□□□ 0.38
NXF1-202ENST00000525576 EIF2AK4Q9P2K8 1649 aaKnown RBP17.43■□□□□ 0.38
NXF1-202ENST00000525576 RRP7BPQ9NSQ0 103 aa17.42■□□□□ 0.38
NXF1-202ENST00000525576 CHIC2Q9UKJ5 165 aa17.42■□□□□ 0.38
NXF1-202ENST00000525576 FAM135AQ9P2D6 1515 aa17.42■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 130.9 ms