RNA–Protein interactions for RNA: ENST00000525558.1

ARHGAP42-204, Transcript of Rho GTPase activating protein 42, humanhuman

TSL 4

Gene ARHGAP42, Length 439 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARHGAP42-204ENST00000525558 FAM163AQ96GL9 167 aaPredicted RBP12.39□□□□□ -0.43
ARHGAP42-204ENST00000525558 SNPHO15079 494 aa12.36□□□□□ -0.43
ARHGAP42-204ENST00000525558 CRISPLD2Q9H0B8 497 aa12.34□□□□□ -0.43
ARHGAP42-204ENST00000525558 NCKAP5LQ9HCH0 1330 aa12.34□□□□□ -0.43
ARHGAP42-204ENST00000525558 CADPS2Q86UW7 1296 aa12.33□□□□□ -0.44
ARHGAP42-204ENST00000525558 GPHNQ9NQX3 736 aaPredicted RBP12.33□□□□□ -0.44
ARHGAP42-204ENST00000525558 SPRYD3Q8NCJ5 442 aa12.3□□□□□ -0.44
ARHGAP42-204ENST00000525558 TMC2Q8TDI7 906 aa12.3□□□□□ -0.44
ARHGAP42-204ENST00000525558 ZBTB4Q9P1Z0 1013 aaPredicted RBP12.29□□□□□ -0.44
ARHGAP42-204ENST00000525558 POTEMA6NI47 508 aa12.28□□□□□ -0.44
ARHGAP42-204ENST00000525558 FOXK1P85037 733 aa12.28□□□□□ -0.44
ARHGAP42-204ENST00000525558 POTEGQ6S5H5 508 aa12.28□□□□□ -0.44
ARHGAP42-204ENST00000525558 DOK7Q18PE1 504 aa12.27□□□□□ -0.45
ARHGAP42-204ENST00000525558 DSG2Q14126 1118 aa12.26□□□□□ -0.45
ARHGAP42-204ENST00000525558 PAXIP1Q6ZW49 1069 aaPredicted RBP12.25□□□□□ -0.45
ARHGAP42-204ENST00000525558 GPR153Q6NV75 609 aa12.24□□□□□ -0.45
ARHGAP42-204ENST00000525558 SLC34A2O95436 690 aa12.23□□□□□ -0.45
ARHGAP42-204ENST00000525558 HOXB1P14653 301 aaPredicted RBP12.23□□□□□ -0.45
ARHGAP42-204ENST00000525558 MFSD10Q14728 455 aa12.22□□□□□ -0.45
ARHGAP42-204ENST00000525558 MARVELD3Q96A59 401 aa12.22□□□□□ -0.45
ARHGAP42-204ENST00000525558 ZSWIM6Q9HCJ5 1215 aa12.22□□□□□ -0.45
ARHGAP42-204ENST00000525558 PLPP6Q8IY26 295 aa12.21□□□□□ -0.45
ARHGAP42-204ENST00000525558 CFAP44Q96MT7 982 aa12.21□□□□□ -0.45
ARHGAP42-204ENST00000525558 PDE4AP27815 886 aa12.18□□□□□ -0.46
ARHGAP42-204ENST00000525558 ZNF710Q8N1W2 664 aa12.18□□□□□ -0.46
ARHGAP42-204ENST00000525558 POTEB3A0JP26 581 aa12.17□□□□□ -0.46
ARHGAP42-204ENST00000525558 PPP1R15BQ5SWA1 713 aa12.17□□□□□ -0.46
ARHGAP42-204ENST00000525558 POTEBQ6S5H4 581 aa12.17□□□□□ -0.46
ARHGAP42-204ENST00000525558 RIMBP2O15034 1052 aa12.16□□□□□ -0.46
ARHGAP42-204ENST00000525558 KHSRPQ92945 711 aaKnown RBP eCLIP12.16□□□□□ -0.46
ARHGAP42-204ENST00000525558 KDM4FA0A1W2PPD8 638 aa12.15□□□□□ -0.46
ARHGAP42-204ENST00000525558 ARSIQ5FYB1 569 aa12.15□□□□□ -0.46
ARHGAP42-204ENST00000525558 PTCD2Q8WV60 388 aaKnown RBP12.15□□□□□ -0.46
ARHGAP42-204ENST00000525558 LARP6Q9BRS8 491 aaKnown RBP12.15□□□□□ -0.46
ARHGAP42-204ENST00000525558 PCDHGA4Q9Y5G9 962 aa12.14□□□□□ -0.47
ARHGAP42-204ENST00000525558 EMP3P54852 163 aa12.13□□□□□ -0.47
ARHGAP42-204ENST00000525558 DDX27Q96GQ7 796 aaKnown RBP12.13□□□□□ -0.47
ARHGAP42-204ENST00000525558 OXER1Q8TDS5 423 aa12.11□□□□□ -0.47
ARHGAP42-204ENST00000525558 HS3ST6Q96QI5 342 aa12.08□□□□□ -0.48
ARHGAP42-204ENST00000525558 TSHZ2Q9NRE2 1034 aa12.08□□□□□ -0.48
ARHGAP42-204ENST00000525558 FAM205CA6NFA0 338 aa12.07□□□□□ -0.48
ARHGAP42-204ENST00000525558 PLCB2Q00722 1185 aa12.07□□□□□ -0.48
ARHGAP42-204ENST00000525558 CAMK2BQ13554 666 aa12.07□□□□□ -0.48
ARHGAP42-204ENST00000525558 NUDT7P0C024 238 aa12.06□□□□□ -0.48
ARHGAP42-204ENST00000525558 EMILIN3Q9NT22 766 aa12.06□□□□□ -0.48
ARHGAP42-204ENST00000525558 CDAN1Q8IWY9 1227 aa12.04□□□□□ -0.48
ARHGAP42-204ENST00000525558 PCDH10Q9P2E7 1040 aa12.03□□□□□ -0.48
ARHGAP42-204ENST00000525558 ZNF316A6NFI3 1004 aaPredicted RBP12.01□□□□□ -0.49
ARHGAP42-204ENST00000525558 UPF1Q92900 1129 aaKnown RBP eCLIP12.01□□□□□ -0.49
ARHGAP42-204ENST00000525558 VARS2Q5ST30 1063 aaKnown RBP12□□□□□ -0.49
ARHGAP42-204ENST00000525558 LHX6Q9UPM6 363 aa12□□□□□ -0.49
ARHGAP42-204ENST00000525558 ERBB3P21860 1342 aa12□□□□□ -0.49
ARHGAP42-204ENST00000525558 KRTAP3-3Q9BYR6 98 aa11.98□□□□□ -0.49
ARHGAP42-204ENST00000525558 KRTAP3-2Q9BYR7 98 aa11.98□□□□□ -0.49
ARHGAP42-204ENST00000525558 TBC1D12O60347 775 aa11.94□□□□□ -0.5
ARHGAP42-204ENST00000525558 ANO8Q9HCE9 1232 aaPredicted RBP11.94□□□□□ -0.5
ARHGAP42-204ENST00000525558 ZNF687Q8N1G0 1237 aa11.93□□□□□ -0.5
ARHGAP42-204ENST00000525558 POTEEQ6S8J3 1075 aa11.91□□□□□ -0.5
ARHGAP42-204ENST00000525558 EVI5O60447 810 aa11.9□□□□□ -0.5
ARHGAP42-204ENST00000525558 ARIH1Q9Y4X5 557 aaPredicted RBP11.9□□□□□ -0.5
ARHGAP42-204ENST00000525558 DPYSL4O14531 572 aa11.89□□□□□ -0.51
ARHGAP42-204ENST00000525558 E2F4Q16254 413 aa11.89□□□□□ -0.51
ARHGAP42-204ENST00000525558 MAP3K9P80192 1104 aa11.86□□□□□ -0.51
ARHGAP42-204ENST00000525558 PSDA5PKW4 1024 aaPredicted RBP11.85□□□□□ -0.51
ARHGAP42-204ENST00000525558 FOSBP53539 338 aa11.84□□□□□ -0.51
ARHGAP42-204ENST00000525558 PDIA6Q15084 440 aa11.83□□□□□ -0.52
ARHGAP42-204ENST00000525558 WDR70Q9NW82 654 aa11.83□□□□□ -0.52
ARHGAP42-204ENST00000525558 JPH4Q96JJ6 628 aa11.82□□□□□ -0.52
ARHGAP42-204ENST00000525558 KCNV2Q8TDN2 545 aa11.8□□□□□ -0.52
ARHGAP42-204ENST00000525558 PBX2P40425 430 aa11.79□□□□□ -0.52
ARHGAP42-204ENST00000525558 KDM2AQ9Y2K7 1162 aa11.79□□□□□ -0.52
ARHGAP42-204ENST00000525558 PTGER2P43116 358 aa11.78□□□□□ -0.52
ARHGAP42-204ENST00000525558 HAP1P54257 671 aaPredicted RBP11.78□□□□□ -0.52
ARHGAP42-204ENST00000525558 PPP4R3BQ5MIZ7 849 aa11.78□□□□□ -0.52
ARHGAP42-204ENST00000525558 ZNF454Q8N9F8 522 aa11.78□□□□□ -0.52
ARHGAP42-204ENST00000525558 AXIN2Q9Y2T1 843 aa11.78□□□□□ -0.52
ARHGAP42-204ENST00000525558 PCDHGA10Q9Y5H3 936 aa11.78□□□□□ -0.52
ARHGAP42-204ENST00000525558 SPNS2Q8IVW8 549 aa11.77□□□□□ -0.53
ARHGAP42-204ENST00000525558 SPDYE16A6NNV3 312 aaPredicted RBP11.74□□□□□ -0.53
ARHGAP42-204ENST00000525558 LSM11P83369 360 aaKnown RBP eCLIP11.74□□□□□ -0.53
ARHGAP42-204ENST00000525558 ADAM33Q9BZ11 813 aa11.74□□□□□ -0.53
ARHGAP42-204ENST00000525558 BCL2L12Q9HB09 334 aa11.74□□□□□ -0.53
ARHGAP42-204ENST00000525558 ARHGAP33O14559 1287 aa11.73□□□□□ -0.53
ARHGAP42-204ENST00000525558 PHF14O94880 888 aa11.73□□□□□ -0.53
ARHGAP42-204ENST00000525558 PSEN2P49810 448 aa11.72□□□□□ -0.53
ARHGAP42-204ENST00000525558 DMRTA1Q5VZB9 504 aa11.72□□□□□ -0.53
ARHGAP42-204ENST00000525558 ARHGEF1Q92888 912 aaKnown RBP11.72□□□□□ -0.53
ARHGAP42-204ENST00000525558 ZDHHC16Q969W1 377 aa11.72□□□□□ -0.53
ARHGAP42-204ENST00000525558 PRIM1P49642 420 aaKnown RBP11.69□□□□□ -0.54
ARHGAP42-204ENST00000525558 DDX12PQ92771 950 aa11.69□□□□□ -0.54
ARHGAP42-204ENST00000525558 TYW1BQ6NUM6 668 aa11.68□□□□□ -0.54
ARHGAP42-204ENST00000525558 KCNK17Q96T54 332 aa11.68□□□□□ -0.54
ARHGAP42-204ENST00000525558 PLSCR2Q9NRY7 297 aa11.68□□□□□ -0.54
ARHGAP42-204ENST00000525558 MMRN1Q13201 1228 aa11.67□□□□□ -0.54
ARHGAP42-204ENST00000525558 FBXW7Q969H0 707 aa11.66□□□□□ -0.54
ARHGAP42-204ENST00000525558 EPAS1Q99814 870 aa11.66□□□□□ -0.54
ARHGAP42-204ENST00000525558 ANKRD13DQ6ZTN6 518 aa11.65□□□□□ -0.54
ARHGAP42-204ENST00000525558 VSIG10Q8N0Z9 540 aa11.65□□□□□ -0.54
ARHGAP42-204ENST00000525558 P3H3Q8IVL6 736 aa11.64□□□□□ -0.55
ARHGAP42-204ENST00000525558 PTPREP23469 700 aa11.63□□□□□ -0.55
Retrieved 100 of 20,778 RNA–protein pairs in 65.8 ms