RNA–Protein interactions for RNA: ENST00000525530.1

PPFIA1-203, Transcript of PTPRF interacting protein alpha 1, humanhuman

TSL 2

Gene PPFIA1, Length 514 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PPFIA1-203ENST00000525530 NLRP6P59044 892 aa13.68□□□□□ -0.22
PPFIA1-203ENST00000525530 SPNS2Q8IVW8 549 aa13.68□□□□□ -0.22
PPFIA1-203ENST00000525530 TAOK2Q9UL54 1235 aa13.66□□□□□ -0.22
PPFIA1-203ENST00000525530 STK25O00506 426 aa13.65□□□□□ -0.22
PPFIA1-203ENST00000525530 DOK7Q18PE1 504 aa13.65□□□□□ -0.22
PPFIA1-203ENST00000525530 MMRN1Q13201 1228 aa13.62□□□□□ -0.23
PPFIA1-203ENST00000525530 ZNF710Q8N1W2 664 aa13.6□□□□□ -0.23
PPFIA1-203ENST00000525530 GPR153Q6NV75 609 aa13.59□□□□□ -0.23
PPFIA1-203ENST00000525530 KIF3CO14782 793 aa13.56□□□□□ -0.24
PPFIA1-203ENST00000525530 ZSWIM6Q9HCJ5 1215 aa13.55□□□□□ -0.24
PPFIA1-203ENST00000525530 RIMBP2O15034 1052 aa13.51□□□□□ -0.25
PPFIA1-203ENST00000525530 ERBB3P21860 1342 aa13.5□□□□□ -0.25
PPFIA1-203ENST00000525530 PPP1R37O75864 691 aa13.5□□□□□ -0.25
PPFIA1-203ENST00000525530 C2orf72A6NCS6 295 aa13.49□□□□□ -0.25
PPFIA1-203ENST00000525530 VARS2Q5ST30 1063 aaKnown RBP13.47□□□□□ -0.25
PPFIA1-203ENST00000525530 ARSIQ5FYB1 569 aa13.46□□□□□ -0.25
PPFIA1-203ENST00000525530 KHSRPQ92945 711 aaKnown RBP eCLIP13.45□□□□□ -0.26
PPFIA1-203ENST00000525530 HS6ST3Q8IZP7 471 aa13.42□□□□□ -0.26
PPFIA1-203ENST00000525530 ZNF687Q8N1G0 1237 aa13.4□□□□□ -0.26
PPFIA1-203ENST00000525530 SLC34A2O95436 690 aa13.35□□□□□ -0.27
PPFIA1-203ENST00000525530 ZNF316A6NFI3 1004 aaPredicted RBP13.34□□□□□ -0.27
PPFIA1-203ENST00000525530 NKX1-1Q15270 411 aaPredicted RBP13.33□□□□□ -0.28
PPFIA1-203ENST00000525530 DNAJC5Q9H3Z4 198 aa13.32□□□□□ -0.28
PPFIA1-203ENST00000525530 TMC2Q8TDI7 906 aa13.3□□□□□ -0.28
PPFIA1-203ENST00000525530 PCDHGA4Q9Y5G9 962 aa13.3□□□□□ -0.28
PPFIA1-203ENST00000525530 NUDT7P0C024 238 aa13.29□□□□□ -0.28
PPFIA1-203ENST00000525530 KDM4FA0A1W2PPD8 638 aa13.28□□□□□ -0.28
PPFIA1-203ENST00000525530 CHGAP10645 457 aaKnown RBP13.28□□□□□ -0.28
PPFIA1-203ENST00000525530 POTEEQ6S8J3 1075 aa13.27□□□□□ -0.29
PPFIA1-203ENST00000525530 LHX6Q9UPM6 363 aa13.25□□□□□ -0.29
PPFIA1-203ENST00000525530 FOXK1P85037 733 aa13.23□□□□□ -0.29
PPFIA1-203ENST00000525530 GPHNQ9NQX3 736 aaPredicted RBP13.22□□□□□ -0.29
PPFIA1-203ENST00000525530 PTCD2Q8WV60 388 aaKnown RBP13.21□□□□□ -0.29
PPFIA1-203ENST00000525530 DSG2Q14126 1118 aa13.19□□□□□ -0.3
PPFIA1-203ENST00000525530 PLPP6Q8IY26 295 aa13.18□□□□□ -0.3
PPFIA1-203ENST00000525530 RNF166Q96A37 237 aaPredicted RBP13.17□□□□□ -0.3
PPFIA1-203ENST00000525530 LSM11P83369 360 aaKnown RBP eCLIP13.16□□□□□ -0.3
PPFIA1-203ENST00000525530 MYT1LQ9UL68 1186 aa13.16□□□□□ -0.3
PPFIA1-203ENST00000525530 ANKRD13DQ6ZTN6 518 aa13.13□□□□□ -0.31
PPFIA1-203ENST00000525530 AXIN2Q9Y2T1 843 aa13.13□□□□□ -0.31
PPFIA1-203ENST00000525530 PBX2P40425 430 aa13.12□□□□□ -0.31
PPFIA1-203ENST00000525530 CRISPLD2Q9H0B8 497 aa13.12□□□□□ -0.31
PPFIA1-203ENST00000525530 PTGER2P43116 358 aa13.09□□□□□ -0.31
PPFIA1-203ENST00000525530 GTPBP6O43824 516 aaPredicted RBP13.08□□□□□ -0.32
PPFIA1-203ENST00000525530 NCKAP5LQ9HCH0 1330 aa13.07□□□□□ -0.32
PPFIA1-203ENST00000525530 OXER1Q8TDS5 423 aa13.05□□□□□ -0.32
PPFIA1-203ENST00000525530 RYDENQ9NUL5 291 aaKnown RBP13.03□□□□□ -0.32
PPFIA1-203ENST00000525530 PSDA5PKW4 1024 aaPredicted RBP13.02□□□□□ -0.33
PPFIA1-203ENST00000525530 ARHGAP33O14559 1287 aa13.01□□□□□ -0.33
PPFIA1-203ENST00000525530 DMRTA1Q5VZB9 504 aa13□□□□□ -0.33
PPFIA1-203ENST00000525530 PPP1R15BQ5SWA1 713 aa12.98□□□□□ -0.33
PPFIA1-203ENST00000525530 PSEN2P49810 448 aa12.97□□□□□ -0.33
PPFIA1-203ENST00000525530 ADGRD1Q6QNK2 874 aa12.97□□□□□ -0.33
PPFIA1-203ENST00000525530 HRO43593 1189 aa12.95□□□□□ -0.34
PPFIA1-203ENST00000525530 TBC1D12O60347 775 aa12.95□□□□□ -0.34
PPFIA1-203ENST00000525530 UPF1Q92900 1129 aaKnown RBP eCLIP12.95□□□□□ -0.34
PPFIA1-203ENST00000525530 TK2O00142 265 aa12.92□□□□□ -0.34
PPFIA1-203ENST00000525530 PDE4AP27815 886 aa12.92□□□□□ -0.34
PPFIA1-203ENST00000525530 PPP4R3BQ5MIZ7 849 aa12.92□□□□□ -0.34
PPFIA1-203ENST00000525530 MFSD10Q14728 455 aa12.91□□□□□ -0.34
PPFIA1-203ENST00000525530 CADPS2Q86UW7 1296 aa12.89□□□□□ -0.35
PPFIA1-203ENST00000525530 ANO8Q9HCE9 1232 aaPredicted RBP12.89□□□□□ -0.35
PPFIA1-203ENST00000525530 LARP6Q9BRS8 491 aaKnown RBP12.87□□□□□ -0.35
PPFIA1-203ENST00000525530 AMER1Q5JTC6 1135 aaPredicted RBP12.86□□□□□ -0.35
PPFIA1-203ENST00000525530 FOSBP53539 338 aa12.85□□□□□ -0.35
PPFIA1-203ENST00000525530 DDX27Q96GQ7 796 aaKnown RBP12.84□□□□□ -0.35
PPFIA1-203ENST00000525530 KCNK17Q96T54 332 aa12.84□□□□□ -0.35
PPFIA1-203ENST00000525530 EMILIN3Q9NT22 766 aa12.84□□□□□ -0.35
PPFIA1-203ENST00000525530 ZNF454Q8N9F8 522 aa12.83□□□□□ -0.36
PPFIA1-203ENST00000525530 BCL2L12Q9HB09 334 aa12.83□□□□□ -0.36
PPFIA1-203ENST00000525530 EVI5O60447 810 aa12.8□□□□□ -0.36
PPFIA1-203ENST00000525530 DCAF8L2P0C7V8 631 aa12.8□□□□□ -0.36
PPFIA1-203ENST00000525530 VPS9D1Q9Y2B5 631 aa12.8□□□□□ -0.36
PPFIA1-203ENST00000525530 RTN4Q9NQC3 1192 aaKnown RBP12.79□□□□□ -0.36
PPFIA1-203ENST00000525530 JPH4Q96JJ6 628 aa12.78□□□□□ -0.36
PPFIA1-203ENST00000525530 SLC4A5Q9BY07 1137 aa12.77□□□□□ -0.37
PPFIA1-203ENST00000525530 HCSTQ9UBK5 93 aa12.76□□□□□ -0.37
PPFIA1-203ENST00000525530 ADAM33Q9BZ11 813 aa12.75□□□□□ -0.37
PPFIA1-203ENST00000525530 BHMG1C9JSJ3 638 aaPredicted RBP12.74□□□□□ -0.37
PPFIA1-203ENST00000525530 ZBED2Q9BTP6 218 aa12.73□□□□□ -0.37
PPFIA1-203ENST00000525530 MAP3K9P80192 1104 aa12.71□□□□□ -0.37
PPFIA1-203ENST00000525530 CAMK2BQ13554 666 aa12.71□□□□□ -0.37
PPFIA1-203ENST00000525530 ZDHHC16Q969W1 377 aa12.71□□□□□ -0.37
PPFIA1-203ENST00000525530 PTPREP23469 700 aa12.7□□□□□ -0.38
PPFIA1-203ENST00000525530 KCTD12Q96CX2 325 aaKnown RBP12.7□□□□□ -0.38
PPFIA1-203ENST00000525530 PCDHGA10Q9Y5H3 936 aa12.7□□□□□ -0.38
PPFIA1-203ENST00000525530 KCNH8Q96L42 1107 aa12.68□□□□□ -0.38
PPFIA1-203ENST00000525530 PLA2G2EQ9NZK7 142 aa12.68□□□□□ -0.38
PPFIA1-203ENST00000525530 BBXQ8WY36 941 aaPredicted RBP12.65□□□□□ -0.38
PPFIA1-203ENST00000525530 COL9A1P20849 921 aa12.62□□□□□ -0.39
PPFIA1-203ENST00000525530 PPP1R3GB7ZBB8 358 aa12.59□□□□□ -0.39
PPFIA1-203ENST00000525530 DPYSL4O14531 572 aa12.59□□□□□ -0.39
PPFIA1-203ENST00000525530 PHF14O94880 888 aa12.59□□□□□ -0.39
PPFIA1-203ENST00000525530 STAC3Q96MF2 364 aa12.59□□□□□ -0.39
PPFIA1-203ENST00000525530 THSD4Q6ZMP0 1018 aa12.58□□□□□ -0.4
PPFIA1-203ENST00000525530 PROX2Q3B8N5 592 aa12.57□□□□□ -0.4
PPFIA1-203ENST00000525530 TYW1BQ6NUM6 668 aa12.57□□□□□ -0.4
PPFIA1-203ENST00000525530 PTPN5P54829 565 aa12.55□□□□□ -0.4
PPFIA1-203ENST00000525530 MRPL50Q8N5N7 158 aaKnown RBP12.54□□□□□ -0.4
PPFIA1-203ENST00000525530 FBXW7Q969H0 707 aa12.54□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 42.7 ms