RNA–Protein interactions for RNA: ENST00000525495.6

CDC27-202, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 1,459 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-202ENST00000525495 AKNAQ7Z591 1439 aa19.03■□□□□ 0.64
CDC27-202ENST00000525495 RAPGEF3O95398 923 aa19.03■□□□□ 0.64
CDC27-202ENST00000525495 RICTORQ6R327 1708 aa18.99■□□□□ 0.63
CDC27-202ENST00000525495 CDC42BPBQ9Y5S2 1711 aa18.98■□□□□ 0.63
CDC27-202ENST00000525495 DENND4BO75064 1496 aaPredicted RBP18.97■□□□□ 0.63
CDC27-202ENST00000525495 KDM4FA0A1W2PPD8 638 aa18.97■□□□□ 0.63
CDC27-202ENST00000525495 PREX2Q70Z35 1606 aa18.96■□□□□ 0.63
CDC27-202ENST00000525495 ADGRL1O94910 1474 aa18.96■□□□□ 0.63
CDC27-202ENST00000525495 ARHGAP5Q13017 1502 aa18.96■□□□□ 0.63
CDC27-202ENST00000525495 CDC42BPAQ5VT25 1732 aa18.96■□□□□ 0.63
CDC27-202ENST00000525495 VPS8Q8N3P4 1428 aa18.96■□□□□ 0.63
CDC27-202ENST00000525495 EFCAB2Q5VUJ9 269 aa18.94■□□□□ 0.62
CDC27-202ENST00000525495 SCAPERQ9BY12 1400 aa18.93■□□□□ 0.62
CDC27-202ENST00000525495 MTUS2Q5JR59 1369 aa18.92■□□□□ 0.62
CDC27-202ENST00000525495 ZMYM4Q5VZL5 1548 aa18.91■□□□□ 0.62
CDC27-202ENST00000525495 POGZQ7Z3K3 1410 aa18.9■□□□□ 0.62
CDC27-202ENST00000525495 EHBP1L1Q8N3D4 1523 aa18.9■□□□□ 0.62
CDC27-202ENST00000525495 TIAM1Q13009 1591 aa18.89■□□□□ 0.61
CDC27-202ENST00000525495 ARHGEF40Q8TER5 1519 aa18.88■□□□□ 0.61
CDC27-202ENST00000525495 GPATCH8Q9UKJ3 1502 aaKnown RBP18.88■□□□□ 0.61
CDC27-202ENST00000525495 ABCC1P33527 1531 aa18.86■□□□□ 0.61
CDC27-202ENST00000525495 ARHGEF12Q9NZN5 1544 aa18.86■□□□□ 0.61
CDC27-202ENST00000525495 YEATS2Q9ULM3 1422 aa18.85■□□□□ 0.61
CDC27-202ENST00000525495 ZFYVE16Q7Z3T8 1539 aa18.84■□□□□ 0.61
CDC27-202ENST00000525495 ITSN2Q9NZM3 1697 aa18.84■□□□□ 0.61
CDC27-202ENST00000525495 SAMD9LQ8IVG5 1584 aa18.84■□□□□ 0.61
CDC27-202ENST00000525495 ZNF518AQ6AHZ1 1483 aa18.83■□□□□ 0.6
CDC27-202ENST00000525495 CCNB3Q8WWL7 1395 aa18.83■□□□□ 0.6
CDC27-202ENST00000525495 KDM5CP41229 1560 aa18.82■□□□□ 0.6
CDC27-202ENST00000525495 MAGI2Q86UL8 1455 aa18.82■□□□□ 0.6
CDC27-202ENST00000525495 AFAP1Q8N556 730 aa18.82■□□□□ 0.6
CDC27-202ENST00000525495 SIGLEC1Q9BZZ2 1709 aa18.82■□□□□ 0.6
CDC27-202ENST00000525495 SUPT6HQ7KZ85 1726 aaKnown RBP18.81■□□□□ 0.6
CDC27-202ENST00000525495 TRAPPC8Q9Y2L5 1435 aa18.8■□□□□ 0.6
CDC27-202ENST00000525495 LRRC9Q6ZRR7 1453 aa18.8■□□□□ 0.6
CDC27-202ENST00000525495 MAP3K1Q13233 1512 aa18.8■□□□□ 0.6
CDC27-202ENST00000525495 ZNF777Q9ULD5 760 aaPredicted RBP18.79■□□□□ 0.6
CDC27-202ENST00000525495 NCOA2Q15596 1464 aa18.79■□□□□ 0.6
CDC27-202ENST00000525495 CFDP1Q9UEE9 299 aaPredicted RBP18.78■□□□□ 0.6
CDC27-202ENST00000525495 SYCP2Q9BX26 1530 aa18.78■□□□□ 0.6
CDC27-202ENST00000525495 KANK4Q5T7N3 995 aaPredicted RBP18.77■□□□□ 0.6
CDC27-202ENST00000525495 HECW2Q9P2P5 1572 aa18.77■□□□□ 0.59
CDC27-202ENST00000525495 BCORL1Q5H9F3 1711 aa18.76■□□□□ 0.59
CDC27-202ENST00000525495 ADAMTSL3P82987 1691 aa18.76■□□□□ 0.59
CDC27-202ENST00000525495 ARID4BQ4LE39 1312 aaPredicted RBP18.74■□□□□ 0.59
CDC27-202ENST00000525495 ABCA6Q8N139 1617 aa18.73■□□□□ 0.59
CDC27-202ENST00000525495 DIP2CQ9Y2E4 1556 aa18.73■□□□□ 0.59
CDC27-202ENST00000525495 ATP10AO60312 1499 aa18.73■□□□□ 0.59
CDC27-202ENST00000525495 MLH3Q9UHC1 1453 aa18.73■□□□□ 0.59
CDC27-202ENST00000525495 ZNF644Q9H582 1327 aaPredicted RBP18.73■□□□□ 0.59
CDC27-202ENST00000525495 HNRNPMP52272 730 aaKnown RBP eCLIP18.73■□□□□ 0.599e-6■■■■□ 20.2
CDC27-202ENST00000525495 KIDINS220Q9ULH0 1771 aa18.73■□□□□ 0.59
CDC27-202ENST00000525495 KIAA1107Q9UPP5 1409 aa18.72■□□□□ 0.59
CDC27-202ENST00000525495 PLEKHH2Q8IVE3 1493 aa18.71■□□□□ 0.59
CDC27-202ENST00000525495 C9orf84Q5VXU9 1444 aa18.71■□□□□ 0.59
CDC27-202ENST00000525495 MADDQ8WXG6 1647 aa18.7■□□□□ 0.58
CDC27-202ENST00000525495 MYT1LQ9UL68 1186 aa18.69■□□□□ 0.58
CDC27-202ENST00000525495 MBD5Q9P267 1494 aa18.68■□□□□ 0.58
CDC27-202ENST00000525495 CAMSAP2Q08AD1 1489 aa18.67■□□□□ 0.58
CDC27-202ENST00000525495 REREQ9P2R6 1566 aa18.66■□□□□ 0.58
CDC27-202ENST00000525495 INO80Q9ULG1 1556 aaPredicted RBP18.66■□□□□ 0.58
CDC27-202ENST00000525495 APLP2Q06481 763 aa18.65■□□□□ 0.58
CDC27-202ENST00000525495 ATP7AQ04656 1500 aa18.65■□□□□ 0.58
CDC27-202ENST00000525495 PTPRMP28827 1452 aa18.64■□□□□ 0.57
CDC27-202ENST00000525495 RIMS1Q86UR5 1692 aaKnown RBP18.64■□□□□ 0.57
CDC27-202ENST00000525495 SPAG9O60271 1321 aaKnown RBP18.64■□□□□ 0.57
CDC27-202ENST00000525495 MLECQ14165 292 aa18.63■□□□□ 0.57
CDC27-202ENST00000525495 MYOM3Q5VTT5 1437 aa18.62■□□□□ 0.57
CDC27-202ENST00000525495 FER1L4A9Z1Z3 1794 aa18.61■□□□□ 0.57
CDC27-202ENST00000525495 AGLP35573 1532 aa18.6■□□□□ 0.57
CDC27-202ENST00000525495 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
CDC27-202ENST00000525495 MIA2Q96PC5 1412 aa18.58■□□□□ 0.56
CDC27-202ENST00000525495 ARHGEF5Q12774 1597 aa18.57■□□□□ 0.56
CDC27-202ENST00000525495 PLXNC1O60486 1568 aa18.56■□□□□ 0.56
CDC27-202ENST00000525495 ADGBQ8N7X0 1667 aa18.55■□□□□ 0.56
CDC27-202ENST00000525495 RTEL1-TNFRSF6BF6WH68 1400 aa18.55■□□□□ 0.56
CDC27-202ENST00000525495 A2MP01023 1474 aa18.55■□□□□ 0.56
CDC27-202ENST00000525495 RSPH4AQ5TD94 716 aa18.52■□□□□ 0.56
CDC27-202ENST00000525495 PTPN23Q9H3S7 1636 aa18.52■□□□□ 0.56
CDC27-202ENST00000525495 FGD6Q6ZV73 1430 aa18.5■□□□□ 0.55
CDC27-202ENST00000525495 MAST1Q9Y2H9 1570 aa18.49■□□□□ 0.55
CDC27-202ENST00000525495 TSPY4P0CV99 314 aa18.47■□□□□ 0.55
CDC27-202ENST00000525495 TSPY10P0CW01 314 aa18.47■□□□□ 0.55
CDC27-202ENST00000525495 TCOF1Q13428 1488 aaKnown RBP18.47■□□□□ 0.55
CDC27-202ENST00000525495 CEBPAP49715 358 aaPredicted RBP18.46■□□□□ 0.55
CDC27-202ENST00000525495 DHX29Q7Z478 1369 aaKnown RBP18.46■□□□□ 0.55
CDC27-202ENST00000525495 CROCC2H7BZ55 1655 aa18.46■□□□□ 0.55
CDC27-202ENST00000525495 C3P01024 1663 aa18.45■□□□□ 0.54
CDC27-202ENST00000525495 ABCC5O15440 1437 aa18.44■□□□□ 0.54
CDC27-202ENST00000525495 DNMT1P26358 1616 aaKnown RBP18.43■□□□□ 0.54
CDC27-202ENST00000525495 LMTK3Q96Q04 1460 aa18.43■□□□□ 0.54
CDC27-202ENST00000525495 PPARGC1BQ86YN6 1023 aaKnown RBP18.42■□□□□ 0.54
CDC27-202ENST00000525495 CLTCQ00610 1675 aaKnown RBP18.42■□□□□ 0.54
CDC27-202ENST00000525495 DAPK1P53355 1430 aa18.42■□□□□ 0.54
CDC27-202ENST00000525495 GGT6Q6P531 493 aa18.41■□□□□ 0.54
CDC27-202ENST00000525495 MROH2AA6NES4 1674 aa18.4■□□□□ 0.54
CDC27-202ENST00000525495 SHANK2Q9UPX8 1470 aa18.4■□□□□ 0.54
CDC27-202ENST00000525495 CNTLNQ9NXG0 1405 aa18.4■□□□□ 0.54
CDC27-202ENST00000525495 ESF1Q9H501 851 aaKnown RBP18.39■□□□□ 0.54
CDC27-202ENST00000525495 KIF3BO15066 747 aa18.39■□□□□ 0.53
Retrieved 100 of 20,778 RNA–protein pairs in 26.3 ms