RNA–Protein interactions for RNA: ENST00000525375.1

GPATCH4-212, Transcript of G-patch domain containing 4, humanhuman

TSL 3

Gene GPATCH4, Length 513 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPATCH4-212ENST00000525375 KANK4Q5T7N3 995 aaPredicted RBP18.9■□□□□ 0.62
GPATCH4-212ENST00000525375 MAP3K1Q13233 1512 aa18.89■□□□□ 0.61
GPATCH4-212ENST00000525375 GPATCH8Q9UKJ3 1502 aaKnown RBP18.89■□□□□ 0.61
GPATCH4-212ENST00000525375 RICTORQ6R327 1708 aa18.88■□□□□ 0.61
GPATCH4-212ENST00000525375 NCOA2Q15596 1464 aa18.87■□□□□ 0.61
GPATCH4-212ENST00000525375 SUPT6HQ7KZ85 1726 aaKnown RBP18.86■□□□□ 0.61
GPATCH4-212ENST00000525375 ADGRL1O94910 1474 aa18.86■□□□□ 0.61
GPATCH4-212ENST00000525375 RAPGEF3O95398 923 aa18.86■□□□□ 0.61
GPATCH4-212ENST00000525375 SAMD9LQ8IVG5 1584 aa18.85■□□□□ 0.61
GPATCH4-212ENST00000525375 ARHGEF12Q9NZN5 1544 aa18.84■□□□□ 0.61
GPATCH4-212ENST00000525375 ABCC1P33527 1531 aa18.84■□□□□ 0.61
GPATCH4-212ENST00000525375 PHLDB1Q86UU1 1377 aa18.83■□□□□ 0.61
GPATCH4-212ENST00000525375 DENND4BO75064 1496 aaPredicted RBP18.83■□□□□ 0.6
GPATCH4-212ENST00000525375 ITSN2Q9NZM3 1697 aa18.82■□□□□ 0.6
GPATCH4-212ENST00000525375 POGZQ7Z3K3 1410 aa18.82■□□□□ 0.6
GPATCH4-212ENST00000525375 SCAPERQ9BY12 1400 aa18.82■□□□□ 0.6
GPATCH4-212ENST00000525375 CCNB3Q8WWL7 1395 aa18.81■□□□□ 0.6
GPATCH4-212ENST00000525375 EFCAB2Q5VUJ9 269 aa18.8■□□□□ 0.6
GPATCH4-212ENST00000525375 ZMYM4Q5VZL5 1548 aa18.78■□□□□ 0.6
GPATCH4-212ENST00000525375 SYCP2Q9BX26 1530 aa18.78■□□□□ 0.6
GPATCH4-212ENST00000525375 TRAPPC8Q9Y2L5 1435 aa18.76■□□□□ 0.59
GPATCH4-212ENST00000525375 KDM5CP41229 1560 aa18.76■□□□□ 0.59
GPATCH4-212ENST00000525375 ARHGEF40Q8TER5 1519 aa18.75■□□□□ 0.59
GPATCH4-212ENST00000525375 ZNF777Q9ULD5 760 aaPredicted RBP18.75■□□□□ 0.59
GPATCH4-212ENST00000525375 ZNF644Q9H582 1327 aaPredicted RBP18.74■□□□□ 0.59
GPATCH4-212ENST00000525375 YEATS2Q9ULM3 1422 aa18.74■□□□□ 0.59
GPATCH4-212ENST00000525375 SIGLEC1Q9BZZ2 1709 aa18.74■□□□□ 0.59
GPATCH4-212ENST00000525375 CFDP1Q9UEE9 299 aaPredicted RBP18.73■□□□□ 0.59
GPATCH4-212ENST00000525375 CAMSAP2Q08AD1 1489 aa18.71■□□□□ 0.59
GPATCH4-212ENST00000525375 ZNF518AQ6AHZ1 1483 aa18.71■□□□□ 0.59
GPATCH4-212ENST00000525375 ZFYVE16Q7Z3T8 1539 aa18.71■□□□□ 0.59
GPATCH4-212ENST00000525375 AFAP1Q8N556 730 aa18.71■□□□□ 0.59
GPATCH4-212ENST00000525375 HECW2Q9P2P5 1572 aa18.69■□□□□ 0.58
GPATCH4-212ENST00000525375 APLP2Q06481 763 aa18.69■□□□□ 0.58
GPATCH4-212ENST00000525375 MYOM3Q5VTT5 1437 aa18.68■□□□□ 0.58
GPATCH4-212ENST00000525375 ABCA6Q8N139 1617 aa18.68■□□□□ 0.58
GPATCH4-212ENST00000525375 HNRNPMP52272 730 aaKnown RBP eCLIP18.68■□□□□ 0.58
GPATCH4-212ENST00000525375 MBD5Q9P267 1494 aa18.68■□□□□ 0.58
GPATCH4-212ENST00000525375 DIP2CQ9Y2E4 1556 aa18.67■□□□□ 0.58
GPATCH4-212ENST00000525375 KIAA1107Q9UPP5 1409 aa18.66■□□□□ 0.58
GPATCH4-212ENST00000525375 KIDINS220Q9ULH0 1771 aa18.66■□□□□ 0.58
GPATCH4-212ENST00000525375 PPARGC1BQ86YN6 1023 aaKnown RBP18.66■□□□□ 0.58
GPATCH4-212ENST00000525375 PLEKHH2Q8IVE3 1493 aa18.65■□□□□ 0.58
GPATCH4-212ENST00000525375 INO80Q9ULG1 1556 aaPredicted RBP18.64■□□□□ 0.58
GPATCH4-212ENST00000525375 MAGI2Q86UL8 1455 aa18.64■□□□□ 0.57
GPATCH4-212ENST00000525375 KDM4FA0A1W2PPD8 638 aa18.63■□□□□ 0.57
GPATCH4-212ENST00000525375 MLH3Q9UHC1 1453 aa18.63■□□□□ 0.57
GPATCH4-212ENST00000525375 PTPN23Q9H3S7 1636 aa18.62■□□□□ 0.57
GPATCH4-212ENST00000525375 ATP7AQ04656 1500 aa18.6■□□□□ 0.57
GPATCH4-212ENST00000525375 FGD6Q6ZV73 1430 aa18.6■□□□□ 0.57
GPATCH4-212ENST00000525375 MIA2Q96PC5 1412 aa18.6■□□□□ 0.57
GPATCH4-212ENST00000525375 ARHGEF5Q12774 1597 aa18.59■□□□□ 0.57
GPATCH4-212ENST00000525375 CCDC141Q6ZP82 1450 aa18.59■□□□□ 0.57
GPATCH4-212ENST00000525375 ATP10AO60312 1499 aa18.58■□□□□ 0.56
GPATCH4-212ENST00000525375 TCOF1Q13428 1488 aaKnown RBP18.58■□□□□ 0.56
GPATCH4-212ENST00000525375 C9orf84Q5VXU9 1444 aa18.57■□□□□ 0.56
GPATCH4-212ENST00000525375 BCORL1Q5H9F3 1711 aa18.57■□□□□ 0.56
GPATCH4-212ENST00000525375 SPAG9O60271 1321 aaKnown RBP18.55■□□□□ 0.56
GPATCH4-212ENST00000525375 REREQ9P2R6 1566 aa18.55■□□□□ 0.56
GPATCH4-212ENST00000525375 ADAMTSL3P82987 1691 aa18.54■□□□□ 0.56
GPATCH4-212ENST00000525375 CROCC2H7BZ55 1655 aa18.54■□□□□ 0.56
GPATCH4-212ENST00000525375 ADGBQ8N7X0 1667 aa18.54■□□□□ 0.56
GPATCH4-212ENST00000525375 MYT1LQ9UL68 1186 aa18.53■□□□□ 0.56
GPATCH4-212ENST00000525375 MADDQ8WXG6 1647 aa18.52■□□□□ 0.56
GPATCH4-212ENST00000525375 PLXNC1O60486 1568 aa18.52■□□□□ 0.56
GPATCH4-212ENST00000525375 DNMT1P26358 1616 aaKnown RBP18.51■□□□□ 0.55
GPATCH4-212ENST00000525375 MAST1Q9Y2H9 1570 aa18.51■□□□□ 0.55
GPATCH4-212ENST00000525375 ABCC5O15440 1437 aa18.5■□□□□ 0.55
GPATCH4-212ENST00000525375 ARID4BQ4LE39 1312 aaPredicted RBP18.49■□□□□ 0.55
GPATCH4-212ENST00000525375 RTEL1-TNFRSF6BF6WH68 1400 aa18.49■□□□□ 0.55
GPATCH4-212ENST00000525375 DAPK1P53355 1430 aa18.48■□□□□ 0.55
GPATCH4-212ENST00000525375 A2MP01023 1474 aa18.46■□□□□ 0.55
GPATCH4-212ENST00000525375 AGLP35573 1532 aa18.46■□□□□ 0.55
GPATCH4-212ENST00000525375 MLECQ14165 292 aa18.46■□□□□ 0.55
GPATCH4-212ENST00000525375 RIMS1Q86UR5 1692 aaKnown RBP18.46■□□□□ 0.55
GPATCH4-212ENST00000525375 SHANK2Q9UPX8 1470 aa18.45■□□□□ 0.54
GPATCH4-212ENST00000525375 FER1L4A9Z1Z3 1794 aa18.44■□□□□ 0.54
GPATCH4-212ENST00000525375 PTPRKQ15262 1439 aa18.43■□□□□ 0.54
GPATCH4-212ENST00000525375 FAM50AQ14320 339 aaKnown RBP18.42■□□□□ 0.54
GPATCH4-212ENST00000525375 RSPH4AQ5TD94 716 aa18.4■□□□□ 0.54
GPATCH4-212ENST00000525375 PTPRMP28827 1452 aa18.39■□□□□ 0.54
GPATCH4-212ENST00000525375 DHX29Q7Z478 1369 aaKnown RBP18.39■□□□□ 0.53
GPATCH4-212ENST00000525375 RRBP1Q9P2E9 1410 aaKnown RBP18.39■□□□□ 0.53
GPATCH4-212ENST00000525375 TSPY4P0CV99 314 aa18.38■□□□□ 0.53
GPATCH4-212ENST00000525375 TSPY10P0CW01 314 aa18.38■□□□□ 0.53
GPATCH4-212ENST00000525375 CHIC2Q9UKJ5 165 aa18.37■□□□□ 0.53
GPATCH4-212ENST00000525375 ADGRL2O95490 1459 aa18.35■□□□□ 0.53
GPATCH4-212ENST00000525375 KIF15Q9NS87 1388 aa18.34■□□□□ 0.53
GPATCH4-212ENST00000525375 MROH1Q8NDA8 1641 aa18.34■□□□□ 0.53
GPATCH4-212ENST00000525375 DUOX2Q9NRD8 1548 aa18.33■□□□□ 0.52
GPATCH4-212ENST00000525375 CLTCQ00610 1675 aaKnown RBP18.32■□□□□ 0.52
GPATCH4-212ENST00000525375 RNF17Q9BXT8 1623 aaKnown RBP18.32■□□□□ 0.52
GPATCH4-212ENST00000525375 EIF2AK4Q9P2K8 1649 aaKnown RBP18.32■□□□□ 0.52
GPATCH4-212ENST00000525375 NCOA1Q15788 1441 aa18.32■□□□□ 0.52
GPATCH4-212ENST00000525375 PLPPR3Q6T4P5 718 aa18.31■□□□□ 0.52
GPATCH4-212ENST00000525375 RRP7BPQ9NSQ0 103 aa18.31■□□□□ 0.52
GPATCH4-212ENST00000525375 C3P01024 1663 aa18.31■□□□□ 0.52
GPATCH4-212ENST00000525375 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP18.3■□□□□ 0.52
GPATCH4-212ENST00000525375 ITGAEP38570 1179 aa18.3■□□□□ 0.52
GPATCH4-212ENST00000525375 KIF3BO15066 747 aa18.29■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 35.4 ms