RNA–Protein interactions for RNA: ENST00000525004.5

UBXN1-205, Transcript of UBX domain protein 1, humanhuman

TSL 3

Gene UBXN1, Length 482 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBXN1-205ENST00000525004 PPARGC1BQ86YN6 1023 aaKnown RBP21.73■■□□□ 1.07
UBXN1-205ENST00000525004 TEX14Q8IWB6 1497 aa21.72■■□□□ 1.07
UBXN1-205ENST00000525004 MIA2Q96PC5 1412 aa21.72■■□□□ 1.07
UBXN1-205ENST00000525004 NEO1Q92859 1461 aa21.71■■□□□ 1.07
UBXN1-205ENST00000525004 EFCAB2Q5VUJ9 269 aa21.7■■□□□ 1.06
UBXN1-205ENST00000525004 FANCAO15360 1455 aa21.7■■□□□ 1.06
UBXN1-205ENST00000525004 CFDP1Q9UEE9 299 aaPredicted RBP21.69■■□□□ 1.06
UBXN1-205ENST00000525004 ARHGAP5Q13017 1502 aa21.69■■□□□ 1.06
UBXN1-205ENST00000525004 CFAP74Q9C0B2 1584 aa21.69■■□□□ 1.06
UBXN1-205ENST00000525004 AKNAQ7Z591 1439 aa21.65■■□□□ 1.06
UBXN1-205ENST00000525004 FGD6Q6ZV73 1430 aa21.64■■□□□ 1.06
UBXN1-205ENST00000525004 SAMD9LQ8IVG5 1584 aa21.64■■□□□ 1.05
UBXN1-205ENST00000525004 KIAA1107Q9UPP5 1409 aa21.63■■□□□ 1.05
UBXN1-205ENST00000525004 TCOF1Q13428 1488 aaKnown RBP21.61■■□□□ 1.05
UBXN1-205ENST00000525004 PLEKHH2Q8IVE3 1493 aa21.6■■□□□ 1.05
UBXN1-205ENST00000525004 PTPN23Q9H3S7 1636 aa21.6■■□□□ 1.05
UBXN1-205ENST00000525004 RRBP1Q9P2E9 1410 aaKnown RBP21.6■■□□□ 1.05
UBXN1-205ENST00000525004 ABCC1P33527 1531 aa21.6■■□□□ 1.05
UBXN1-205ENST00000525004 ZNF644Q9H582 1327 aaPredicted RBP21.59■■□□□ 1.05
UBXN1-205ENST00000525004 ARHGEF12Q9NZN5 1544 aa21.58■■□□□ 1.04
UBXN1-205ENST00000525004 DROSHAQ9NRR4 1374 aaKnown RBP eCLIP21.58■■□□□ 1.04
UBXN1-205ENST00000525004 ADGRL1O94910 1474 aa21.58■■□□□ 1.04
UBXN1-205ENST00000525004 CAMSAP2Q08AD1 1489 aa21.58■■□□□ 1.04
UBXN1-205ENST00000525004 MBD5Q9P267 1494 aa21.57■■□□□ 1.04
UBXN1-205ENST00000525004 COL17A1Q9UMD9 1497 aaPredicted RBP21.57■■□□□ 1.04
UBXN1-205ENST00000525004 SCAPERQ9BY12 1400 aa21.56■■□□□ 1.04
UBXN1-205ENST00000525004 ZNF777Q9ULD5 760 aaPredicted RBP21.56■■□□□ 1.04
UBXN1-205ENST00000525004 RSPH4AQ5TD94 716 aa21.54■■□□□ 1.04
UBXN1-205ENST00000525004 RICTORQ6R327 1708 aa21.53■■□□□ 1.04
UBXN1-205ENST00000525004 ARHGEF5Q12774 1597 aa21.53■■□□□ 1.04
UBXN1-205ENST00000525004 DENND4BO75064 1496 aaPredicted RBP21.52■■□□□ 1.04
UBXN1-205ENST00000525004 SYCP2Q9BX26 1530 aa21.52■■□□□ 1.04
UBXN1-205ENST00000525004 HNRNPMP52272 730 aaKnown RBP eCLIP21.51■■□□□ 1.03
UBXN1-205ENST00000525004 POGZQ7Z3K3 1410 aa21.5■■□□□ 1.03
UBXN1-205ENST00000525004 TRAPPC8Q9Y2L5 1435 aa21.5■■□□□ 1.03
UBXN1-205ENST00000525004 KDM6BO15054 1643 aa21.49■■□□□ 1.03
UBXN1-205ENST00000525004 KDM5CP41229 1560 aa21.48■■□□□ 1.03
UBXN1-205ENST00000525004 FRMPD1Q5SYB0 1578 aa21.48■■□□□ 1.03
UBXN1-205ENST00000525004 ZNF518AQ6AHZ1 1483 aa21.48■■□□□ 1.03
UBXN1-205ENST00000525004 DNMT1P26358 1616 aaKnown RBP21.47■■□□□ 1.03
UBXN1-205ENST00000525004 RAPGEF3O95398 923 aa21.46■■□□□ 1.03
UBXN1-205ENST00000525004 AFAP1Q8N556 730 aa21.46■■□□□ 1.03
UBXN1-205ENST00000525004 CCDC141Q6ZP82 1450 aa21.45■■□□□ 1.03
UBXN1-205ENST00000525004 ZMYM4Q5VZL5 1548 aa21.45■■□□□ 1.02
UBXN1-205ENST00000525004 ABCC5O15440 1437 aa21.45■■□□□ 1.02
UBXN1-205ENST00000525004 FAM50AQ14320 339 aaKnown RBP21.44■■□□□ 1.02
UBXN1-205ENST00000525004 MLH3Q9UHC1 1453 aa21.43■■□□□ 1.02
UBXN1-205ENST00000525004 CROCC2H7BZ55 1655 aa21.42■■□□□ 1.02
UBXN1-205ENST00000525004 DAPK1P53355 1430 aa21.42■■□□□ 1.02
UBXN1-205ENST00000525004 MAST1Q9Y2H9 1570 aa21.41■■□□□ 1.02
UBXN1-205ENST00000525004 MAGI2Q86UL8 1455 aa21.41■■□□□ 1.02
UBXN1-205ENST00000525004 RTEL1-TNFRSF6BF6WH68 1400 aa21.41■■□□□ 1.02
UBXN1-205ENST00000525004 SHANK2Q9UPX8 1470 aa21.4■■□□□ 1.02
UBXN1-205ENST00000525004 KIDINS220Q9ULH0 1771 aa21.39■■□□□ 1.01
UBXN1-205ENST00000525004 TSPY4P0CV99 314 aa21.38■■□□□ 1.01
UBXN1-205ENST00000525004 TSPY10P0CW01 314 aa21.38■■□□□ 1.01
UBXN1-205ENST00000525004 INO80Q9ULG1 1556 aaPredicted RBP21.38■■□□□ 1.01
UBXN1-205ENST00000525004 PTPRKQ15262 1439 aa21.38■■□□□ 1.01
UBXN1-205ENST00000525004 HECW2Q9P2P5 1572 aa21.37■■□□□ 1.01
UBXN1-205ENST00000525004 SPAG9O60271 1321 aaKnown RBP21.36■■□□□ 1.01
UBXN1-205ENST00000525004 ZFYVE16Q7Z3T8 1539 aa21.35■■□□□ 1.01
UBXN1-205ENST00000525004 ATP7AQ04656 1500 aa21.34■■□□□ 1.01
UBXN1-205ENST00000525004 C9orf84Q5VXU9 1444 aa21.34■■□□□ 1.01
UBXN1-205ENST00000525004 ADGRL2O95490 1459 aa21.33■■□□□ 1.01
UBXN1-205ENST00000525004 PLXNC1O60486 1568 aa21.31■■□□□ 1
UBXN1-205ENST00000525004 ADGBQ8N7X0 1667 aa21.31■■□□□ 1
UBXN1-205ENST00000525004 NCOA1Q15788 1441 aa21.3■■□□□ 1
UBXN1-205ENST00000525004 YEATS2Q9ULM3 1422 aa21.3■■□□□ 1
UBXN1-205ENST00000525004 ROCK1Q13464 1354 aa21.3■■□□□ 1
UBXN1-205ENST00000525004 ABCA6Q8N139 1617 aa21.29■■□□□ 1
UBXN1-205ENST00000525004 DIP2CQ9Y2E4 1556 aa21.28■■□□□ 1
UBXN1-205ENST00000525004 TRIM26Q12899 539 aaPredicted RBP21.28■■□□□ 1
UBXN1-205ENST00000525004 ARHGEF40Q8TER5 1519 aa21.28■■□□□ 1
UBXN1-205ENST00000525004 REREQ9P2R6 1566 aa21.27■□□□□ 0.99
UBXN1-205ENST00000525004 ATP10AO60312 1499 aa21.26■□□□□ 0.99
UBXN1-205ENST00000525004 ANKRD30AQ9BXX3 1397 aa21.26■□□□□ 0.99
UBXN1-205ENST00000525004 CHIC2Q9UKJ5 165 aa21.26■□□□□ 0.99
UBXN1-205ENST00000525004 ITGAEP38570 1179 aa21.25■□□□□ 0.99
UBXN1-205ENST00000525004 DHX29Q7Z478 1369 aaKnown RBP21.22■□□□□ 0.99
UBXN1-205ENST00000525004 MYT1LQ9UL68 1186 aa21.21■□□□□ 0.99
UBXN1-205ENST00000525004 KIF15Q9NS87 1388 aa21.21■□□□□ 0.99
UBXN1-205ENST00000525004 A2MP01023 1474 aa21.2■□□□□ 0.98
UBXN1-205ENST00000525004 DUOX2Q9NRD8 1548 aa21.2■□□□□ 0.98
UBXN1-205ENST00000525004 RRP7BPQ9NSQ0 103 aa21.19■□□□□ 0.98
UBXN1-205ENST00000525004 AGLP35573 1532 aa21.19■□□□□ 0.98
UBXN1-205ENST00000525004 BCORL1Q5H9F3 1711 aa21.18■□□□□ 0.98
UBXN1-205ENST00000525004 HFM1A2PYH4 1435 aa21.18■□□□□ 0.98
UBXN1-205ENST00000525004 SIGLEC1Q9BZZ2 1709 aa21.18■□□□□ 0.98
UBXN1-205ENST00000525004 NAIPQ13075 1403 aa21.17■□□□□ 0.98
UBXN1-205ENST00000525004 GCC2Q8IWJ2 1684 aa21.15■□□□□ 0.98
UBXN1-205ENST00000525004 ERBINQ96RT1 1412 aa21.15■□□□□ 0.98
UBXN1-205ENST00000525004 EIF2AK4Q9P2K8 1649 aaKnown RBP21.15■□□□□ 0.98
UBXN1-205ENST00000525004 ANKRD50Q9ULJ7 1429 aa21.13■□□□□ 0.97
UBXN1-205ENST00000525004 SETD5Q9C0A6 1442 aa21.08■□□□□ 0.97
UBXN1-205ENST00000525004 RNF17Q9BXT8 1623 aaKnown RBP21.07■□□□□ 0.96
UBXN1-205ENST00000525004 DEPDC5O75140 1603 aa21.07■□□□□ 0.96
UBXN1-205ENST00000525004 KIF3BO15066 747 aa21.06■□□□□ 0.96
UBXN1-205ENST00000525004 HRCP23327 699 aa21.06■□□□□ 0.96
UBXN1-205ENST00000525004 PPP6R1Q9UPN7 881 aa21.04■□□□□ 0.96
UBXN1-205ENST00000525004 MROH1Q8NDA8 1641 aa21.04■□□□□ 0.96
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms