RNA–Protein interactions for RNA: ENST00000524877.5

BEST1-203, Transcript of bestrophin 1, humanhuman

TSL 2

Gene BEST1, Length 5,772 nt, Biotype retained intron.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BEST1-203ENST00000524877 HNRNPUQ00839 825 aaKnown RBP eCLIP22.62■■□□□ 1.21
BEST1-203ENST00000524877 NUDCQ9Y266 331 aa22.62■■□□□ 1.21
BEST1-203ENST00000524877 POLA1P09884 1462 aaPredicted RBP22.61■■□□□ 1.21
BEST1-203ENST00000524877 SIN3AQ96ST3 1273 aa22.59■■□□□ 1.21
BEST1-203ENST00000524877 ARXQ96QS3 562 aa22.58■■□□□ 1.2
BEST1-203ENST00000524877 SYNJ2O15056 1496 aa22.57■■□□□ 1.2
BEST1-203ENST00000524877 HDGFL2Q7Z4V5 671 aaPredicted RBP22.56■■□□□ 1.2
BEST1-203ENST00000524877 MAPK8IP3Q9UPT6 1336 aa22.55■■□□□ 1.2
BEST1-203ENST00000524877 MPHOSPH9Q99550 1183 aa22.55■■□□□ 1.2
BEST1-203ENST00000524877 PAK3O75914 559 aaPredicted RBP22.54■■□□□ 1.2
BEST1-203ENST00000524877 EIF3AQ14152 1382 aaKnown RBP22.51■■□□□ 1.19
BEST1-203ENST00000524877 UNC13AQ9UPW8 1703 aa22.51■■□□□ 1.19
BEST1-203ENST00000524877 PNNQ9H307 717 aaKnown RBP22.51■■□□□ 1.19
BEST1-203ENST00000524877 CUX1P39880 1505 aa22.5■■□□□ 1.19
BEST1-203ENST00000524877 TOP2BQ02880 1626 aa22.49■■□□□ 1.19
BEST1-203ENST00000524877 NPHP1O15259 732 aa22.49■■□□□ 1.19
BEST1-203ENST00000524877 MYH16Q9H6N6 1097 aa22.49■■□□□ 1.19
BEST1-203ENST00000524877 FOXD1Q16676 465 aa22.48■■□□□ 1.19
BEST1-203ENST00000524877 SOX12O15370 315 aa22.48■■□□□ 1.19
BEST1-203ENST00000524877 SYNJ1O43426 1573 aa22.47■■□□□ 1.19
BEST1-203ENST00000524877 TNNT2P45379 298 aaPredicted RBP22.47■■□□□ 1.19
BEST1-203ENST00000524877 TIMELESSQ9UNS1 1208 aa22.46■■□□□ 1.19
BEST1-203ENST00000524877 NUTM2DQ5VT03 806 aaPredicted RBP22.46■■□□□ 1.19
BEST1-203ENST00000524877 UACAQ9BZF9 1416 aa22.45■■□□□ 1.19
BEST1-203ENST00000524877 ROCK2O75116 1388 aaKnown RBP22.45■■□□□ 1.18
BEST1-203ENST00000524877 ARHGAP5Q13017 1502 aa22.44■■□□□ 1.18
BEST1-203ENST00000524877 CSB-PGBD3P0DP91 1061 aa22.44■■□□□ 1.18
BEST1-203ENST00000524877 CCDC9Q9Y3X0 531 aaKnown RBP22.43■■□□□ 1.18
BEST1-203ENST00000524877 ANP32EQ9BTT0 268 aa22.41■■□□□ 1.18
BEST1-203ENST00000524877 U2SURPO15042 1029 aaKnown RBP22.4■■□□□ 1.18
BEST1-203ENST00000524877 CC2D1BQ5T0F9 858 aaKnown RBP22.39■■□□□ 1.18
BEST1-203ENST00000524877 RAB3GAP2Q9H2M9 1393 aa22.39■■□□□ 1.17
BEST1-203ENST00000524877 MORC1Q86VD1 984 aa22.39■■□□□ 1.17
BEST1-203ENST00000524877 MYOM3Q5VTT5 1437 aa22.38■■□□□ 1.17
BEST1-203ENST00000524877 ERICH3Q5RHP9 1530 aa22.37■■□□□ 1.17
BEST1-203ENST00000524877 ABCF1Q8NE71 845 aaKnown RBP eCLIP22.37■■□□□ 1.17
BEST1-203ENST00000524877 ANP32AP39687 249 aaKnown RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 NGDNQ8NEJ9 315 aaKnown RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 LAS1LQ9Y4W2 734 aaKnown RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 VGFO15240 615 aaPredicted RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 MAGI1Q96QZ7 1491 aaPredicted RBP22.36■■□□□ 1.17
BEST1-203ENST00000524877 CCDC144AA2RUR9 1427 aa22.35■■□□□ 1.17
BEST1-203ENST00000524877 ABCA10Q8WWZ4 1543 aa22.34■■□□□ 1.17
BEST1-203ENST00000524877 CASKIN1Q8WXD9 1431 aa22.34■■□□□ 1.17
BEST1-203ENST00000524877 EFCAB5A4FU69 1503 aa22.33■■□□□ 1.17
BEST1-203ENST00000524877 TERF2IPQ9NYB0 399 aa22.31■■□□□ 1.16
BEST1-203ENST00000524877 KIAA0586Q9BVV6 1533 aa22.3■■□□□ 1.16
BEST1-203ENST00000524877 PEG3Q9GZU2 1588 aa22.3■■□□□ 1.16
BEST1-203ENST00000524877 KIF21BO75037 1637 aa22.3■■□□□ 1.16
BEST1-203ENST00000524877 NEUROD2Q15784 382 aa22.28■■□□□ 1.16
BEST1-203ENST00000524877 POGZQ7Z3K3 1410 aa22.27■■□□□ 1.16
BEST1-203ENST00000524877 UPF2Q9HAU5 1272 aaKnown RBP22.27■■□□□ 1.16
BEST1-203ENST00000524877 FYCO1Q9BQS8 1478 aa22.26■■□□□ 1.15
BEST1-203ENST00000524877 PLEKHH2Q8IVE3 1493 aa22.26■■□□□ 1.15
BEST1-203ENST00000524877 RTF1Q92541 710 aaKnown RBP22.26■■□□□ 1.15
BEST1-203ENST00000524877 MEX3CQ5U5Q3 659 aaKnown RBP22.24■■□□□ 1.15
BEST1-203ENST00000524877 HECW1Q76N89 1606 aa22.24■■□□□ 1.15
BEST1-203ENST00000524877 KIF15Q9NS87 1388 aa22.23■■□□□ 1.15
BEST1-203ENST00000524877 URB2Q14146 1524 aaKnown RBP22.23■■□□□ 1.15
BEST1-203ENST00000524877 CUL7Q14999 1698 aa22.23■■□□□ 1.15
BEST1-203ENST00000524877 GRIN2AQ12879 1464 aa22.21■■□□□ 1.15
BEST1-203ENST00000524877 HSPA5P11021 654 aaKnown RBP22.2■■□□□ 1.15
BEST1-203ENST00000524877 IQGAP2Q13576 1575 aa22.2■■□□□ 1.14
BEST1-203ENST00000524877 TRAK1Q9UPV9 953 aa22.19■■□□□ 1.14
BEST1-203ENST00000524877 NUTM2FA1L443 756 aa22.18■■□□□ 1.14
BEST1-203ENST00000524877 NCOA2Q15596 1464 aa22.17■■□□□ 1.14
BEST1-203ENST00000524877 AFAP1Q8N556 730 aa22.17■■□□□ 1.14
BEST1-203ENST00000524877 FGD6Q6ZV73 1430 aa22.16■■□□□ 1.14
BEST1-203ENST00000524877 FTSJ3Q8IY81 847 aaKnown RBP22.16■■□□□ 1.14
BEST1-203ENST00000524877 ATF3P18847 181 aa22.16■■□□□ 1.14
BEST1-203ENST00000524877 KTN1Q86UP2 1357 aaKnown RBP22.15■■□□□ 1.14
BEST1-203ENST00000524877 ZNF644Q9H582 1327 aaPredicted RBP22.15■■□□□ 1.14
BEST1-203ENST00000524877 HSP90AA1P07900 732 aaKnown RBP22.15■■□□□ 1.14
BEST1-203ENST00000524877 LRRC9Q6ZRR7 1453 aa22.13■■□□□ 1.13
BEST1-203ENST00000524877 NBR1Q14596 966 aa22.13■■□□□ 1.13
BEST1-203ENST00000524877 FKBP8Q14318 412 aa22.13■■□□□ 1.13
BEST1-203ENST00000524877 EHBP1L1Q8N3D4 1523 aa22.12■■□□□ 1.13
BEST1-203ENST00000524877 AMPHP49418 695 aa22.12■■□□□ 1.13
BEST1-203ENST00000524877 CCDC136Q96JN2 1154 aa22.12■■□□□ 1.13
BEST1-203ENST00000524877 ANP32BQ92688 251 aaKnown RBP22.12■■□□□ 1.13
BEST1-203ENST00000524877 TROQ12816 1431 aaPredicted RBP22.11■■□□□ 1.13
BEST1-203ENST00000524877 EVA1CP58658 441 aa22.11■■□□□ 1.13
BEST1-203ENST00000524877 L3MBTL2Q969R5 705 aa22.1■■□□□ 1.13
BEST1-203ENST00000524877 CHMP4BQ9H444 224 aaKnown RBP22.1■■□□□ 1.13
BEST1-203ENST00000524877 PRXQ9BXM0 1461 aa22.1■■□□□ 1.13
BEST1-203ENST00000524877 EVC2Q86UK5 1308 aa22.09■■□□□ 1.13
BEST1-203ENST00000524877 ZNF608Q9ULD9 1512 aaPredicted RBP22.08■■□□□ 1.12
BEST1-203ENST00000524877 CD109Q6YHK3 1445 aa22.07■■□□□ 1.12
BEST1-203ENST00000524877 SUGP2Q8IX01 1082 aaKnown RBP eCLIP22.07■■□□□ 1.12
BEST1-203ENST00000524877 THEMISQ8N1K5 641 aaPredicted RBP22.06■■□□□ 1.12
BEST1-203ENST00000524877 SCAPERQ9BY12 1400 aa22.06■■□□□ 1.12
BEST1-203ENST00000524877 ANKRD50Q9ULJ7 1429 aa22.06■■□□□ 1.12
BEST1-203ENST00000524877 CALD1Q05682 793 aaKnown RBP22.06■■□□□ 1.12
BEST1-203ENST00000524877 MS4A1P11836 297 aa22.05■■□□□ 1.12
BEST1-203ENST00000524877 MIER1Q8N108 512 aa22.05■■□□□ 1.12
BEST1-203ENST00000524877 PSME1Q06323 249 aa22.04■■□□□ 1.12
BEST1-203ENST00000524877 RAPGEF3O95398 923 aa22.04■■□□□ 1.12
BEST1-203ENST00000524877 GOLGA2Q08379 1002 aa22.03■■□□□ 1.12
BEST1-203ENST00000524877 TMX4Q9H1E5 349 aaPredicted RBP22.02■■□□□ 1.12
BEST1-203ENST00000524877 MINK1Q8N4C8 1332 aaPredicted RBP22.02■■□□□ 1.12
Retrieved 100 of 20,778 RNA–protein pairs in 136.9 ms