RNA–Protein interactions for RNA: ENST00000524654.1

CTSB-207, Transcript of cathepsin B, humanhuman

TSL 5

Gene CTSB, Length 368 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSB-207ENST00000524654 ZMYM4Q5VZL5 1548 aa17.61■□□□□ 0.41
CTSB-207ENST00000524654 ARHGAP5Q13017 1502 aa17.6■□□□□ 0.41
CTSB-207ENST00000524654 MAGI2Q86UL8 1455 aa17.58■□□□□ 0.41
CTSB-207ENST00000524654 ARHGEF40Q8TER5 1519 aa17.57■□□□□ 0.4
CTSB-207ENST00000524654 YEATS2Q9ULM3 1422 aa17.55■□□□□ 0.4
CTSB-207ENST00000524654 PREX2Q70Z35 1606 aa17.55■□□□□ 0.4
CTSB-207ENST00000524654 MTUS2Q5JR59 1369 aa17.54■□□□□ 0.4
CTSB-207ENST00000524654 ZFYVE16Q7Z3T8 1539 aa17.54■□□□□ 0.4
CTSB-207ENST00000524654 GPATCH8Q9UKJ3 1502 aaKnown RBP17.54■□□□□ 0.4
CTSB-207ENST00000524654 ZNF518AQ6AHZ1 1483 aa17.54■□□□□ 0.4
CTSB-207ENST00000524654 CDC42BPBQ9Y5S2 1711 aa17.53■□□□□ 0.4
CTSB-207ENST00000524654 AFAP1Q8N556 730 aa17.53■□□□□ 0.4
CTSB-207ENST00000524654 VPS8Q8N3P4 1428 aa17.53■□□□□ 0.4
CTSB-207ENST00000524654 ARHGEF12Q9NZN5 1544 aa17.52■□□□□ 0.39
CTSB-207ENST00000524654 ARID4BQ4LE39 1312 aaPredicted RBP17.5■□□□□ 0.39
CTSB-207ENST00000524654 KDM5CP41229 1560 aa17.5■□□□□ 0.39
CTSB-207ENST00000524654 ABCC1P33527 1531 aa17.5■□□□□ 0.39
CTSB-207ENST00000524654 EHBP1L1Q8N3D4 1523 aa17.49■□□□□ 0.39
CTSB-207ENST00000524654 CCNB3Q8WWL7 1395 aa17.49■□□□□ 0.39
CTSB-207ENST00000524654 CDC42BPAQ5VT25 1732 aa17.49■□□□□ 0.39
CTSB-207ENST00000524654 TRAPPC8Q9Y2L5 1435 aa17.48■□□□□ 0.39
CTSB-207ENST00000524654 ATP10AO60312 1499 aa17.48■□□□□ 0.39
CTSB-207ENST00000524654 ADAMTSL3P82987 1691 aa17.48■□□□□ 0.39
CTSB-207ENST00000524654 CFDP1Q9UEE9 299 aaPredicted RBP17.47■□□□□ 0.39
CTSB-207ENST00000524654 MLH3Q9UHC1 1453 aa17.46■□□□□ 0.39
CTSB-207ENST00000524654 ZNF777Q9ULD5 760 aaPredicted RBP17.46■□□□□ 0.39
CTSB-207ENST00000524654 BCORL1Q5H9F3 1711 aa17.46■□□□□ 0.39
CTSB-207ENST00000524654 SAMD9LQ8IVG5 1584 aa17.45■□□□□ 0.38
CTSB-207ENST00000524654 C9orf84Q5VXU9 1444 aa17.45■□□□□ 0.38
CTSB-207ENST00000524654 TIAM1Q13009 1591 aa17.45■□□□□ 0.38
CTSB-207ENST00000524654 PTPRMP28827 1452 aa17.44■□□□□ 0.38
CTSB-207ENST00000524654 KIAA1107Q9UPP5 1409 aa17.44■□□□□ 0.38
CTSB-207ENST00000524654 SIGLEC1Q9BZZ2 1709 aa17.44■□□□□ 0.38
CTSB-207ENST00000524654 HECW2Q9P2P5 1572 aa17.43■□□□□ 0.38
CTSB-207ENST00000524654 ITSN2Q9NZM3 1697 aa17.42■□□□□ 0.38
CTSB-207ENST00000524654 SYCP2Q9BX26 1530 aa17.42■□□□□ 0.38
CTSB-207ENST00000524654 HNRNPMP52272 730 aaKnown RBP eCLIP17.41■□□□□ 0.38
CTSB-207ENST00000524654 NCOA2Q15596 1464 aa17.41■□□□□ 0.38
CTSB-207ENST00000524654 PLEKHH2Q8IVE3 1493 aa17.41■□□□□ 0.38
CTSB-207ENST00000524654 MAP3K1Q13233 1512 aa17.41■□□□□ 0.38
CTSB-207ENST00000524654 DIP2CQ9Y2E4 1556 aa17.4■□□□□ 0.38
CTSB-207ENST00000524654 MADDQ8WXG6 1647 aa17.4■□□□□ 0.38
CTSB-207ENST00000524654 LRRC9Q6ZRR7 1453 aa17.4■□□□□ 0.38
CTSB-207ENST00000524654 MYT1LQ9UL68 1186 aa17.39■□□□□ 0.37
CTSB-207ENST00000524654 ZNF644Q9H582 1327 aaPredicted RBP17.39■□□□□ 0.37
CTSB-207ENST00000524654 REREQ9P2R6 1566 aa17.38■□□□□ 0.37
CTSB-207ENST00000524654 KANK4Q5T7N3 995 aaPredicted RBP17.38■□□□□ 0.37
CTSB-207ENST00000524654 ABCA6Q8N139 1617 aa17.37■□□□□ 0.37
CTSB-207ENST00000524654 MLECQ14165 292 aa17.37■□□□□ 0.37
CTSB-207ENST00000524654 MBD5Q9P267 1494 aa17.37■□□□□ 0.37
CTSB-207ENST00000524654 SPAG9O60271 1321 aaKnown RBP17.36■□□□□ 0.37
CTSB-207ENST00000524654 SUPT6HQ7KZ85 1726 aaKnown RBP17.35■□□□□ 0.37
CTSB-207ENST00000524654 KIDINS220Q9ULH0 1771 aa17.34■□□□□ 0.37
CTSB-207ENST00000524654 AGLP35573 1532 aa17.33■□□□□ 0.37
CTSB-207ENST00000524654 RIMS1Q86UR5 1692 aaKnown RBP17.31■□□□□ 0.36
CTSB-207ENST00000524654 INO80Q9ULG1 1556 aaPredicted RBP17.31■□□□□ 0.36
CTSB-207ENST00000524654 ATP7AQ04656 1500 aa17.31■□□□□ 0.36
CTSB-207ENST00000524654 CAMSAP2Q08AD1 1489 aa17.3■□□□□ 0.36
CTSB-207ENST00000524654 RSPH4AQ5TD94 716 aa17.28■□□□□ 0.36
CTSB-207ENST00000524654 RTEL1-TNFRSF6BF6WH68 1400 aa17.28■□□□□ 0.36
CTSB-207ENST00000524654 APLP2Q06481 763 aa17.27■□□□□ 0.36
CTSB-207ENST00000524654 MYOM3Q5VTT5 1437 aa17.26■□□□□ 0.35
CTSB-207ENST00000524654 A2MP01023 1474 aa17.25■□□□□ 0.35
CTSB-207ENST00000524654 CCDC141Q6ZP82 1450 aa17.25■□□□□ 0.35
CTSB-207ENST00000524654 MIA2Q96PC5 1412 aa17.25■□□□□ 0.35
CTSB-207ENST00000524654 FER1L4A9Z1Z3 1794 aa17.25■□□□□ 0.35
CTSB-207ENST00000524654 LMTK3Q96Q04 1460 aa17.24■□□□□ 0.35
CTSB-207ENST00000524654 PLXNC1O60486 1568 aa17.24■□□□□ 0.35
CTSB-207ENST00000524654 PLPPR3Q6T4P5 718 aa17.24■□□□□ 0.35
CTSB-207ENST00000524654 CEBPAP49715 358 aaPredicted RBP17.23■□□□□ 0.35
CTSB-207ENST00000524654 ARHGEF5Q12774 1597 aa17.22■□□□□ 0.35
CTSB-207ENST00000524654 DHX29Q7Z478 1369 aaKnown RBP17.2■□□□□ 0.34
CTSB-207ENST00000524654 ESF1Q9H501 851 aaKnown RBP17.19■□□□□ 0.34
CTSB-207ENST00000524654 CNTLNQ9NXG0 1405 aa17.19■□□□□ 0.34
CTSB-207ENST00000524654 TSPY4P0CV99 314 aa17.18■□□□□ 0.34
CTSB-207ENST00000524654 TSPY10P0CW01 314 aa17.18■□□□□ 0.34
CTSB-207ENST00000524654 ADGBQ8N7X0 1667 aa17.17■□□□□ 0.34
CTSB-207ENST00000524654 GGT6Q6P531 493 aa17.15■□□□□ 0.34
CTSB-207ENST00000524654 PPP6R1Q9UPN7 881 aa17.15■□□□□ 0.34
CTSB-207ENST00000524654 HSPA2P54652 639 aa17.14■□□□□ 0.33
CTSB-207ENST00000524654 ZMYM3Q14202 1370 aa17.14■□□□□ 0.33
CTSB-207ENST00000524654 FGD6Q6ZV73 1430 aa17.13■□□□□ 0.33
CTSB-207ENST00000524654 MAST1Q9Y2H9 1570 aa17.13■□□□□ 0.33
CTSB-207ENST00000524654 TCOF1Q13428 1488 aaKnown RBP17.12■□□□□ 0.33
CTSB-207ENST00000524654 C3P01024 1663 aa17.11■□□□□ 0.33
CTSB-207ENST00000524654 KIF3BO15066 747 aa17.11■□□□□ 0.33
CTSB-207ENST00000524654 ABCC5O15440 1437 aa17.1■□□□□ 0.33
CTSB-207ENST00000524654 NPATQ14207 1427 aa17.1■□□□□ 0.33
CTSB-207ENST00000524654 PTPN23Q9H3S7 1636 aa17.1■□□□□ 0.33
CTSB-207ENST00000524654 UHRF1BP1Q6BDS2 1440 aa17.09■□□□□ 0.33
CTSB-207ENST00000524654 MROH2AA6NES4 1674 aa17.09■□□□□ 0.33
CTSB-207ENST00000524654 PREX1Q8TCU6 1659 aa17.08■□□□□ 0.32
CTSB-207ENST00000524654 SHANK2Q9UPX8 1470 aa17.08■□□□□ 0.32
CTSB-207ENST00000524654 DAPK1P53355 1430 aa17.06■□□□□ 0.32
CTSB-207ENST00000524654 PTPRKQ15262 1439 aa17.05■□□□□ 0.32
CTSB-207ENST00000524654 CLTCQ00610 1675 aaKnown RBP17.05■□□□□ 0.32
CTSB-207ENST00000524654 FAM135AQ9P2D6 1515 aa17.05■□□□□ 0.32
CTSB-207ENST00000524654 DNMT1P26358 1616 aaKnown RBP17.03■□□□□ 0.32
CTSB-207ENST00000524654 KIF15Q9NS87 1388 aa17.02■□□□□ 0.32
CTSB-207ENST00000524654 WASHC2CQ9Y4E1 1318 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 36.5 ms