RNA–Protein interactions for RNA: ENST00000524028.1

PTP4A3-206, Transcript of protein tyrosine phosphatase type IVA, member 3, humanhuman

TSL 5 BASIC

Gene PTP4A3, Length 963 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTP4A3-206ENST00000524028 ZFYVE16Q7Z3T8 1539 aa30.75■■■□□ 2.51
PTP4A3-206ENST00000524028 MADDQ8WXG6 1647 aa30.75■■■□□ 2.51
PTP4A3-206ENST00000524028 MAGI2Q86UL8 1455 aa30.74■■■□□ 2.51
PTP4A3-206ENST00000524028 CASKIN1Q8WXD9 1431 aa30.72■■■□□ 2.51
PTP4A3-206ENST00000524028 MYO5CQ9NQX4 1742 aa30.71■■■□□ 2.51
PTP4A3-206ENST00000524028 CLIP1P30622 1438 aa30.71■■■□□ 2.51
PTP4A3-206ENST00000524028 SIGLEC1Q9BZZ2 1709 aa30.7■■■□□ 2.5
PTP4A3-206ENST00000524028 PCF11O94913 1555 aaKnown RBP30.69■■■□□ 2.5
PTP4A3-206ENST00000524028 ILDR1Q86SU0 546 aaPredicted RBP30.68■■■□□ 2.5
PTP4A3-206ENST00000524028 ARHGAP5Q13017 1502 aa30.65■■■□□ 2.5
PTP4A3-206ENST00000524028 CCDC18Q5T9S5 1454 aa30.63■■■□□ 2.49
PTP4A3-206ENST00000524028 RIMS1Q86UR5 1692 aaKnown RBP30.62■■■□□ 2.49
PTP4A3-206ENST00000524028 MLECQ14165 292 aa30.61■■■□□ 2.49
PTP4A3-206ENST00000524028 AFAP1Q8N556 730 aa30.61■■■□□ 2.49
PTP4A3-206ENST00000524028 ATP10AO60312 1499 aa30.6■■■□□ 2.49
PTP4A3-206ENST00000524028 ZNF518AQ6AHZ1 1483 aa30.57■■■□□ 2.48
PTP4A3-206ENST00000524028 FYCO1Q9BQS8 1478 aa30.57■■■□□ 2.48
PTP4A3-206ENST00000524028 LMTK3Q96Q04 1460 aa30.55■■■□□ 2.48
PTP4A3-206ENST00000524028 C9orf84Q5VXU9 1444 aa30.55■■■□□ 2.48
PTP4A3-206ENST00000524028 CDC42BPBQ9Y5S2 1711 aa30.54■■■□□ 2.48
PTP4A3-206ENST00000524028 PLPPR3Q6T4P5 718 aa30.54■■■□□ 2.48
PTP4A3-206ENST00000524028 KDM5CP41229 1560 aa30.54■■■□□ 2.48
PTP4A3-206ENST00000524028 ARHGEF12Q9NZN5 1544 aa30.51■■■□□ 2.47
PTP4A3-206ENST00000524028 PREX2Q70Z35 1606 aa30.5■■■□□ 2.47
PTP4A3-206ENST00000524028 TRAPPC8Q9Y2L5 1435 aa30.47■■■□□ 2.47
PTP4A3-206ENST00000524028 MYT1LQ9UL68 1186 aa30.46■■■□□ 2.47
PTP4A3-206ENST00000524028 ABCC1P33527 1531 aa30.45■■■□□ 2.47
PTP4A3-206ENST00000524028 MLH3Q9UHC1 1453 aa30.44■■■□□ 2.46
PTP4A3-206ENST00000524028 DIP2CQ9Y2E4 1556 aa30.43■■■□□ 2.46
PTP4A3-206ENST00000524028 FER1L4A9Z1Z3 1794 aa30.43■■■□□ 2.46
PTP4A3-206ENST00000524028 HSPA2P54652 639 aa30.42■■■□□ 2.46
PTP4A3-206ENST00000524028 CDC42BPAQ5VT25 1732 aa30.4■■■□□ 2.46
PTP4A3-206ENST00000524028 GPATCH8Q9UKJ3 1502 aaKnown RBP30.38■■■□□ 2.45
PTP4A3-206ENST00000524028 ABCA6Q8N139 1617 aa30.38■■■□□ 2.45
PTP4A3-206ENST00000524028 ITSN2Q9NZM3 1697 aa30.37■■■□□ 2.45
PTP4A3-206ENST00000524028 CEBPAP49715 358 aaPredicted RBP30.37■■■□□ 2.45
PTP4A3-206ENST00000524028 ZNF777Q9ULD5 760 aaPredicted RBP30.37■■■□□ 2.45
PTP4A3-206ENST00000524028 REREQ9P2R6 1566 aa30.35■■■□□ 2.45
PTP4A3-206ENST00000524028 SAMD9LQ8IVG5 1584 aa30.32■■■□□ 2.44
PTP4A3-206ENST00000524028 HNRNPMP52272 730 aaKnown RBP eCLIP30.3■■■□□ 2.444e-8■■■■■ 28.3
PTP4A3-206ENST00000524028 KIDINS220Q9ULH0 1771 aa30.29■■■□□ 2.44
PTP4A3-206ENST00000524028 AGLP35573 1532 aa30.28■■■□□ 2.44
PTP4A3-206ENST00000524028 MTUS2Q5JR59 1369 aa30.28■■■□□ 2.44
PTP4A3-206ENST00000524028 SYCP2Q9BX26 1530 aa30.27■■■□□ 2.44
PTP4A3-206ENST00000524028 CFDP1Q9UEE9 299 aaPredicted RBP30.27■■■□□ 2.44
PTP4A3-206ENST00000524028 CEP162Q5TB80 1403 aa30.27■■■□□ 2.44
PTP4A3-206ENST00000524028 CCNB3Q8WWL7 1395 aa30.27■■■□□ 2.44
PTP4A3-206ENST00000524028 FBXO41Q8TF61 875 aa30.23■■■□□ 2.43
PTP4A3-206ENST00000524028 SPAG9O60271 1321 aaKnown RBP30.22■■■□□ 2.43
PTP4A3-206ENST00000524028 KIAA1107Q9UPP5 1409 aa30.22■■■□□ 2.43
PTP4A3-206ENST00000524028 PLEKHH2Q8IVE3 1493 aa30.18■■■□□ 2.42
PTP4A3-206ENST00000524028 PREX1Q8TCU6 1659 aa30.17■■■□□ 2.42
PTP4A3-206ENST00000524028 ZNF644Q9H582 1327 aaPredicted RBP30.17■■■□□ 2.42
PTP4A3-206ENST00000524028 ESF1Q9H501 851 aaKnown RBP30.15■■■□□ 2.42
PTP4A3-206ENST00000524028 TIAM1Q13009 1591 aa30.15■■■□□ 2.42
PTP4A3-206ENST00000524028 EHBP1L1Q8N3D4 1523 aa30.14■■■□□ 2.42
PTP4A3-206ENST00000524028 ATP7AQ04656 1500 aa30.12■■■□□ 2.41
PTP4A3-206ENST00000524028 C3P01024 1663 aa30.12■■■□□ 2.41
PTP4A3-206ENST00000524028 UHRF1BP1Q6BDS2 1440 aa30.12■■■□□ 2.41
PTP4A3-206ENST00000524028 LOC105371045A0A1W2PR82 267 aa30.11■■■□□ 2.41
PTP4A3-206ENST00000524028 INO80Q9ULG1 1556 aaPredicted RBP30.1■■■□□ 2.41
PTP4A3-206ENST00000524028 CNTLNQ9NXG0 1405 aa30.08■■■□□ 2.41
PTP4A3-206ENST00000524028 MBD5Q9P267 1494 aa30.07■■■□□ 2.4
PTP4A3-206ENST00000524028 A2MP01023 1474 aa30.06■■■□□ 2.4
PTP4A3-206ENST00000524028 SUPT6HQ7KZ85 1726 aaKnown RBP30.05■■■□□ 2.4
PTP4A3-206ENST00000524028 PLXNC1O60486 1568 aa30.04■■■□□ 2.4
PTP4A3-206ENST00000524028 SETD1BQ9UPS6 1966 aaKnown RBP30.04■■■□□ 2.4
PTP4A3-206ENST00000524028 NCOA2Q15596 1464 aa30.01■■■□□ 2.4
PTP4A3-206ENST00000524028 ZMYM3Q14202 1370 aa30.01■■■□□ 2.39
PTP4A3-206ENST00000524028 STRCQ7RTU9 1775 aa30■■■□□ 2.39
PTP4A3-206ENST00000524028 CERKQ8TCT0 537 aa30■■■□□ 2.39
PTP4A3-206ENST00000524028 GGT6Q6P531 493 aa29.97■■■□□ 2.39
PTP4A3-206ENST00000524028 DMRT2Q9Y5R5 561 aa29.96■■■□□ 2.39
PTP4A3-206ENST00000524028 RTEL1-TNFRSF6BF6WH68 1400 aa29.96■■■□□ 2.39
PTP4A3-206ENST00000524028 MROH2AA6NES4 1674 aa29.95■■■□□ 2.39
PTP4A3-206ENST00000524028 NPATQ14207 1427 aa29.95■■■□□ 2.38
PTP4A3-206ENST00000524028 VPS8Q8N3P4 1428 aa29.95■■■□□ 2.38
PTP4A3-206ENST00000524028 CAMSAP2Q08AD1 1489 aa29.92■■■□□ 2.38
PTP4A3-206ENST00000524028 CLTCQ00610 1675 aaKnown RBP29.91■■■□□ 2.38
PTP4A3-206ENST00000524028 ADGBQ8N7X0 1667 aa29.91■■■□□ 2.38
PTP4A3-206ENST00000524028 DHX29Q7Z478 1369 aaKnown RBP29.9■■■□□ 2.38
PTP4A3-206ENST00000524028 CCDC141Q6ZP82 1450 aa29.88■■■□□ 2.37
PTP4A3-206ENST00000524028 LRRC9Q6ZRR7 1453 aa29.87■■■□□ 2.37
PTP4A3-206ENST00000524028 PPP6R1Q9UPN7 881 aa29.87■■■□□ 2.37
PTP4A3-206ENST00000524028 PTPRTO14522 1441 aa29.87■■■□□ 2.37
PTP4A3-206ENST00000524028 PTPRKQ15262 1439 aa29.86■■■□□ 2.37
PTP4A3-206ENST00000524028 NCOA1Q15788 1441 aa29.86■■■□□ 2.37
PTP4A3-206ENST00000524028 KANK4Q5T7N3 995 aaPredicted RBP29.85■■■□□ 2.37
PTP4A3-206ENST00000524028 RSPH4AQ5TD94 716 aa29.85■■■□□ 2.37
PTP4A3-206ENST00000524028 KIF3BO15066 747 aa29.8■■■□□ 2.36
PTP4A3-206ENST00000524028 CAMSAP1Q5T5Y3 1602 aa29.8■■■□□ 2.36
PTP4A3-206ENST00000524028 ARHGEF5Q12774 1597 aa29.77■■■□□ 2.36
PTP4A3-206ENST00000524028 MAP3K1Q13233 1512 aa29.77■■■□□ 2.36
PTP4A3-206ENST00000524028 NCKAP5LQ9HCH0 1330 aa29.75■■■□□ 2.35
PTP4A3-206ENST00000524028 MYO3AQ8NEV4 1616 aa29.75■■■□□ 2.35
PTP4A3-206ENST00000524028 TSPY4P0CV99 314 aa29.75■■■□□ 2.35
PTP4A3-206ENST00000524028 TSPY10P0CW01 314 aa29.75■■■□□ 2.35
PTP4A3-206ENST00000524028 FBXO31Q5XUX0 539 aaPredicted RBP29.71■■■□□ 2.35
PTP4A3-206ENST00000524028 CEP170BQ9Y4F5 1589 aaPredicted RBP29.71■■■□□ 2.35
PTP4A3-206ENST00000524028 ZNF142P52746 1687 aaPredicted RBP29.71■■■□□ 2.35
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms