RNA–Protein interactions for RNA: ENST00000523851.1

SREK1-214, Transcript of splicing regulatory glutamic acid and lysine rich protein 1, humanhuman

TSL 3

Gene SREK1, Length 458 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREK1-214ENST00000523851 MAGI2Q86UL8 1455 aa26.67■■□□□ 1.86
SREK1-214ENST00000523851 SIGLEC1Q9BZZ2 1709 aa26.66■■□□□ 1.86
SREK1-214ENST00000523851 KIF14Q15058 1648 aa26.65■■□□□ 1.86
SREK1-214ENST00000523851 EFCAB2Q5VUJ9 269 aa26.64■■□□□ 1.86
SREK1-214ENST00000523851 TROQ12816 1431 aaPredicted RBP26.64■■□□□ 1.85
SREK1-214ENST00000523851 POGZQ7Z3K3 1410 aa26.64■■□□□ 1.85
SREK1-214ENST00000523851 RIMS1Q86UR5 1692 aaKnown RBP26.62■■□□□ 1.85
SREK1-214ENST00000523851 CLIP1P30622 1438 aa26.56■■□□□ 1.84
SREK1-214ENST00000523851 PCF11O94913 1555 aaKnown RBP26.54■■□□□ 1.84
SREK1-214ENST00000523851 CASKIN1Q8WXD9 1431 aa26.54■■□□□ 1.84
SREK1-214ENST00000523851 LMTK3Q96Q04 1460 aa26.54■■□□□ 1.84
SREK1-214ENST00000523851 ARHGAP5Q13017 1502 aa26.54■■□□□ 1.84
SREK1-214ENST00000523851 ATP10AO60312 1499 aa26.53■■□□□ 1.84
SREK1-214ENST00000523851 MLECQ14165 292 aa26.52■■□□□ 1.84
SREK1-214ENST00000523851 CDC42BPBQ9Y5S2 1711 aa26.51■■□□□ 1.83
SREK1-214ENST00000523851 AFAP1Q8N556 730 aa26.5■■□□□ 1.83
SREK1-214ENST00000523851 CCDC18Q5T9S5 1454 aa26.49■■□□□ 1.83
SREK1-214ENST00000523851 ZNF518AQ6AHZ1 1483 aa26.49■■□□□ 1.83
SREK1-214ENST00000523851 C9orf84Q5VXU9 1444 aa26.48■■□□□ 1.83
SREK1-214ENST00000523851 FER1L4A9Z1Z3 1794 aa26.48■■□□□ 1.83
SREK1-214ENST00000523851 KDM5CP41229 1560 aa26.47■■□□□ 1.83
SREK1-214ENST00000523851 PLPPR3Q6T4P5 718 aa26.46■■□□□ 1.83
SREK1-214ENST00000523851 ARHGEF12Q9NZN5 1544 aa26.44■■□□□ 1.82
SREK1-214ENST00000523851 PREX2Q70Z35 1606 aa26.43■■□□□ 1.82
SREK1-214ENST00000523851 FYCO1Q9BQS8 1478 aa26.42■■□□□ 1.82
SREK1-214ENST00000523851 HSPA2P54652 639 aa26.39■■□□□ 1.82
SREK1-214ENST00000523851 DIP2CQ9Y2E4 1556 aa26.38■■□□□ 1.81
SREK1-214ENST00000523851 CDC42BPAQ5VT25 1732 aa26.38■■□□□ 1.81
SREK1-214ENST00000523851 ABCC1P33527 1531 aa26.38■■□□□ 1.81
SREK1-214ENST00000523851 MLH3Q9UHC1 1453 aa26.37■■□□□ 1.81
SREK1-214ENST00000523851 MYT1LQ9UL68 1186 aa26.37■■□□□ 1.81
SREK1-214ENST00000523851 TRAPPC8Q9Y2L5 1435 aa26.37■■□□□ 1.81
SREK1-214ENST00000523851 ITSN2Q9NZM3 1697 aa26.35■■□□□ 1.81
SREK1-214ENST00000523851 REREQ9P2R6 1566 aa26.34■■□□□ 1.81
SREK1-214ENST00000523851 ABCA6Q8N139 1617 aa26.34■■□□□ 1.81
SREK1-214ENST00000523851 FBXO41Q8TF61 875 aa26.33■■□□□ 1.81
SREK1-214ENST00000523851 CEBPAP49715 358 aaPredicted RBP26.32■■□□□ 1.8
SREK1-214ENST00000523851 KIDINS220Q9ULH0 1771 aa26.28■■□□□ 1.8
SREK1-214ENST00000523851 GPATCH8Q9UKJ3 1502 aaKnown RBP26.28■■□□□ 1.8
SREK1-214ENST00000523851 AGLP35573 1532 aa26.27■■□□□ 1.8
SREK1-214ENST00000523851 PREX1Q8TCU6 1659 aa26.26■■□□□ 1.79
SREK1-214ENST00000523851 SAMD9LQ8IVG5 1584 aa26.25■■□□□ 1.79
SREK1-214ENST00000523851 ZNF777Q9ULD5 760 aaPredicted RBP26.25■■□□□ 1.79
SREK1-214ENST00000523851 CEP162Q5TB80 1403 aa26.23■■□□□ 1.79
SREK1-214ENST00000523851 LOC105371045A0A1W2PR82 267 aa26.22■■□□□ 1.79
SREK1-214ENST00000523851 SYCP2Q9BX26 1530 aa26.2■■□□□ 1.79
SREK1-214ENST00000523851 HNRNPMP52272 730 aaKnown RBP eCLIP26.2■■□□□ 1.783e-7■■■■□ 25
SREK1-214ENST00000523851 SETD1BQ9UPS6 1966 aaKnown RBP26.19■■□□□ 1.78
SREK1-214ENST00000523851 C3P01024 1663 aa26.19■■□□□ 1.78
SREK1-214ENST00000523851 CFDP1Q9UEE9 299 aaPredicted RBP26.17■■□□□ 1.78
SREK1-214ENST00000523851 KIAA1107Q9UPP5 1409 aa26.16■■□□□ 1.78
SREK1-214ENST00000523851 CCNB3Q8WWL7 1395 aa26.16■■□□□ 1.78
SREK1-214ENST00000523851 MTUS2Q5JR59 1369 aa26.15■■□□□ 1.78
SREK1-214ENST00000523851 SPAG9O60271 1321 aaKnown RBP26.14■■□□□ 1.78
SREK1-214ENST00000523851 UHRF1BP1Q6BDS2 1440 aa26.14■■□□□ 1.78
SREK1-214ENST00000523851 ESF1Q9H501 851 aaKnown RBP26.14■■□□□ 1.78
SREK1-214ENST00000523851 STRCQ7RTU9 1775 aa26.12■■□□□ 1.77
SREK1-214ENST00000523851 PLEKHH2Q8IVE3 1493 aa26.12■■□□□ 1.77
SREK1-214ENST00000523851 ATP7AQ04656 1500 aa26.09■■□□□ 1.77
SREK1-214ENST00000523851 SUPT6HQ7KZ85 1726 aaKnown RBP26.08■■□□□ 1.77
SREK1-214ENST00000523851 INO80Q9ULG1 1556 aaPredicted RBP26.08■■□□□ 1.77
SREK1-214ENST00000523851 CNTLNQ9NXG0 1405 aa26.08■■□□□ 1.77
SREK1-214ENST00000523851 CERKQ8TCT0 537 aa26.08■■□□□ 1.77
SREK1-214ENST00000523851 TIAM1Q13009 1591 aa26.07■■□□□ 1.76
SREK1-214ENST00000523851 EHBP1L1Q8N3D4 1523 aa26.06■■□□□ 1.76
SREK1-214ENST00000523851 ZNF644Q9H582 1327 aaPredicted RBP26.06■■□□□ 1.76
SREK1-214ENST00000523851 DMRT2Q9Y5R5 561 aa26.05■■□□□ 1.76
SREK1-214ENST00000523851 PLXNC1O60486 1568 aa26.04■■□□□ 1.76
SREK1-214ENST00000523851 MROH2AA6NES4 1674 aa26.04■■□□□ 1.76
SREK1-214ENST00000523851 A2MP01023 1474 aa26.03■■□□□ 1.76
SREK1-214ENST00000523851 MBD5Q9P267 1494 aa26.02■■□□□ 1.76
SREK1-214ENST00000523851 ZMYM3Q14202 1370 aa26.01■■□□□ 1.75
SREK1-214ENST00000523851 NPATQ14207 1427 aa25.97■■□□□ 1.75
SREK1-214ENST00000523851 CLTCQ00610 1675 aaKnown RBP25.97■■□□□ 1.75
SREK1-214ENST00000523851 ADGBQ8N7X0 1667 aa25.97■■□□□ 1.75
SREK1-214ENST00000523851 VPS8Q8N3P4 1428 aa25.97■■□□□ 1.75
SREK1-214ENST00000523851 GGT6Q6P531 493 aa25.95■■□□□ 1.74
SREK1-214ENST00000523851 PTPRTO14522 1441 aa25.95■■□□□ 1.74
SREK1-214ENST00000523851 RTEL1-TNFRSF6BF6WH68 1400 aa25.94■■□□□ 1.74
SREK1-214ENST00000523851 NCOA2Q15596 1464 aa25.92■■□□□ 1.74
SREK1-214ENST00000523851 NCOA1Q15788 1441 aa25.9■■□□□ 1.74
SREK1-214ENST00000523851 PPP6R1Q9UPN7 881 aa25.9■■□□□ 1.74
SREK1-214ENST00000523851 DHX29Q7Z478 1369 aaKnown RBP25.88■■□□□ 1.73
SREK1-214ENST00000523851 CAMSAP1Q5T5Y3 1602 aa25.88■■□□□ 1.73
SREK1-214ENST00000523851 PTPRKQ15262 1439 aa25.88■■□□□ 1.73
SREK1-214ENST00000523851 CAMSAP2Q08AD1 1489 aa25.86■■□□□ 1.73
SREK1-214ENST00000523851 RSPH4AQ5TD94 716 aa25.85■■□□□ 1.73
SREK1-214ENST00000523851 CCDC141Q6ZP82 1450 aa25.85■■□□□ 1.73
SREK1-214ENST00000523851 MYO3AQ8NEV4 1616 aa25.84■■□□□ 1.73
SREK1-214ENST00000523851 MAP3K1Q13233 1512 aa25.83■■□□□ 1.73
SREK1-214ENST00000523851 ZNF142P52746 1687 aaPredicted RBP25.83■■□□□ 1.73
SREK1-214ENST00000523851 LTBP4Q8N2S1 1624 aa25.81■■□□□ 1.72
SREK1-214ENST00000523851 NCKAP5LQ9HCH0 1330 aa25.8■■□□□ 1.72
SREK1-214ENST00000523851 LRRC9Q6ZRR7 1453 aa25.79■■□□□ 1.72
SREK1-214ENST00000523851 KIF3BO15066 747 aa25.79■■□□□ 1.72
SREK1-214ENST00000523851 ARHGEF5Q12774 1597 aa25.78■■□□□ 1.72
SREK1-214ENST00000523851 CEP170BQ9Y4F5 1589 aaPredicted RBP25.78■■□□□ 1.72
SREK1-214ENST00000523851 PLA2R1Q13018 1463 aa25.75■■□□□ 1.71
SREK1-214ENST00000523851 KANK4Q5T7N3 995 aaPredicted RBP25.75■■□□□ 1.71
SREK1-214ENST00000523851 TSPY4P0CV99 314 aa25.74■■□□□ 1.71
Retrieved 100 of 20,778 RNA–protein pairs in 8.8 ms