RNA–Protein interactions for RNA: ENST00000523237.1

CLN8-206, Transcript of CLN8, transmembrane ER and ERGIC protein, humanhuman

TSL 3

Gene CLN8, Length 835 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN8-206ENST00000523237 CDC42BPBQ9Y5S2 1711 aa26.14■■□□□ 1.77
CLN8-206ENST00000523237 POGZQ7Z3K3 1410 aa26.14■■□□□ 1.77
CLN8-206ENST00000523237 CEP162Q5TB80 1403 aa26.13■■□□□ 1.77
CLN8-206ENST00000523237 MAGI2Q86UL8 1455 aa26.12■■□□□ 1.77
CLN8-206ENST00000523237 ZFYVE16Q7Z3T8 1539 aa26.12■■□□□ 1.77
CLN8-206ENST00000523237 PREX2Q70Z35 1606 aa26.11■■□□□ 1.77
CLN8-206ENST00000523237 ADAMTSL3P82987 1691 aa26.1■■□□□ 1.77
CLN8-206ENST00000523237 BCORL1Q5H9F3 1711 aa26.1■■□□□ 1.77
CLN8-206ENST00000523237 ARID4BQ4LE39 1312 aaPredicted RBP26.1■■□□□ 1.77
CLN8-206ENST00000523237 CDC42BPAQ5VT25 1732 aa26.07■■□□□ 1.76
CLN8-206ENST00000523237 YEATS2Q9ULM3 1422 aa26.05■■□□□ 1.76
CLN8-206ENST00000523237 ZNF518AQ6AHZ1 1483 aa26.04■■□□□ 1.76
CLN8-206ENST00000523237 KDM5CP41229 1560 aa26■■□□□ 1.75
CLN8-206ENST00000523237 MADDQ8WXG6 1647 aa25.99■■□□□ 1.75
CLN8-206ENST00000523237 ABCC1P33527 1531 aa25.99■■□□□ 1.75
CLN8-206ENST00000523237 SIGLEC1Q9BZZ2 1709 aa25.99■■□□□ 1.75
CLN8-206ENST00000523237 PTPRMP28827 1452 aa25.98■■□□□ 1.75
CLN8-206ENST00000523237 MTUS2Q5JR59 1369 aa25.98■■□□□ 1.75
CLN8-206ENST00000523237 ITSN2Q9NZM3 1697 aa25.98■■□□□ 1.75
CLN8-206ENST00000523237 LOC105371045A0A1W2PR82 267 aa25.97■■□□□ 1.75
CLN8-206ENST00000523237 HECW2Q9P2P5 1572 aa25.96■■□□□ 1.75
CLN8-206ENST00000523237 AFAP1Q8N556 730 aa25.96■■□□□ 1.75
CLN8-206ENST00000523237 ATP10AO60312 1499 aa25.96■■□□□ 1.75
CLN8-206ENST00000523237 GPATCH8Q9UKJ3 1502 aaKnown RBP25.94■■□□□ 1.74
CLN8-206ENST00000523237 C9orf84Q5VXU9 1444 aa25.94■■□□□ 1.74
CLN8-206ENST00000523237 EHBP1L1Q8N3D4 1523 aa25.93■■□□□ 1.74
CLN8-206ENST00000523237 ARHGEF12Q9NZN5 1544 aa25.93■■□□□ 1.74
CLN8-206ENST00000523237 RIMS1Q86UR5 1692 aaKnown RBP25.93■■□□□ 1.74
CLN8-206ENST00000523237 MYT1LQ9UL68 1186 aa25.92■■□□□ 1.74
CLN8-206ENST00000523237 CCNB3Q8WWL7 1395 aa25.91■■□□□ 1.74
CLN8-206ENST00000523237 SAMD9LQ8IVG5 1584 aa25.9■■□□□ 1.74
CLN8-206ENST00000523237 TRAPPC8Q9Y2L5 1435 aa25.9■■□□□ 1.74
CLN8-206ENST00000523237 MLH3Q9UHC1 1453 aa25.9■■□□□ 1.74
CLN8-206ENST00000523237 ZNF777Q9ULD5 760 aaPredicted RBP25.89■■□□□ 1.74
CLN8-206ENST00000523237 DIP2CQ9Y2E4 1556 aa25.88■■□□□ 1.73
CLN8-206ENST00000523237 FER1L4A9Z1Z3 1794 aa25.87■■□□□ 1.73
CLN8-206ENST00000523237 ABCA6Q8N139 1617 aa25.86■■□□□ 1.73
CLN8-206ENST00000523237 CFDP1Q9UEE9 299 aaPredicted RBP25.86■■□□□ 1.73
CLN8-206ENST00000523237 SYCP2Q9BX26 1530 aa25.85■■□□□ 1.73
CLN8-206ENST00000523237 MLECQ14165 292 aa25.85■■□□□ 1.73
CLN8-206ENST00000523237 VPS8Q8N3P4 1428 aa25.85■■□□□ 1.73
CLN8-206ENST00000523237 TIAM1Q13009 1591 aa25.84■■□□□ 1.73
CLN8-206ENST00000523237 REREQ9P2R6 1566 aa25.84■■□□□ 1.73
CLN8-206ENST00000523237 PLEKHH2Q8IVE3 1493 aa25.84■■□□□ 1.73
CLN8-206ENST00000523237 KIDINS220Q9ULH0 1771 aa25.83■■□□□ 1.73
CLN8-206ENST00000523237 SUPT6HQ7KZ85 1726 aaKnown RBP25.81■■□□□ 1.72
CLN8-206ENST00000523237 KIAA1107Q9UPP5 1409 aa25.8■■□□□ 1.72
CLN8-206ENST00000523237 HNRNPMP52272 730 aaKnown RBP eCLIP25.78■■□□□ 1.726e-8■□□□□ 11
CLN8-206ENST00000523237 AGLP35573 1532 aa25.75■■□□□ 1.71
CLN8-206ENST00000523237 SPAG9O60271 1321 aaKnown RBP25.74■■□□□ 1.71
CLN8-206ENST00000523237 NCOA2Q15596 1464 aa25.73■■□□□ 1.71
CLN8-206ENST00000523237 PLPPR3Q6T4P5 718 aa25.72■■□□□ 1.71
CLN8-206ENST00000523237 ATP7AQ04656 1500 aa25.72■■□□□ 1.71
CLN8-206ENST00000523237 INO80Q9ULG1 1556 aaPredicted RBP25.71■■□□□ 1.71
CLN8-206ENST00000523237 LRRC9Q6ZRR7 1453 aa25.7■■□□□ 1.7
CLN8-206ENST00000523237 MAP3K1Q13233 1512 aa25.69■■□□□ 1.7
CLN8-206ENST00000523237 LMTK3Q96Q04 1460 aa25.69■■□□□ 1.7
CLN8-206ENST00000523237 ZNF644Q9H582 1327 aaPredicted RBP25.68■■□□□ 1.7
CLN8-206ENST00000523237 MBD5Q9P267 1494 aa25.66■■□□□ 1.7
CLN8-206ENST00000523237 CAMSAP2Q08AD1 1489 aa25.63■■□□□ 1.69
CLN8-206ENST00000523237 ADGBQ8N7X0 1667 aa25.62■■□□□ 1.69
CLN8-206ENST00000523237 ESF1Q9H501 851 aaKnown RBP25.62■■□□□ 1.69
CLN8-206ENST00000523237 PLXNC1O60486 1568 aa25.61■■□□□ 1.69
CLN8-206ENST00000523237 A2MP01023 1474 aa25.6■■□□□ 1.69
CLN8-206ENST00000523237 PREX1Q8TCU6 1659 aa25.59■■□□□ 1.69
CLN8-206ENST00000523237 CEBPAP49715 358 aaPredicted RBP25.59■■□□□ 1.69
CLN8-206ENST00000523237 C3P01024 1663 aa25.58■■□□□ 1.69
CLN8-206ENST00000523237 RTEL1-TNFRSF6BF6WH68 1400 aa25.58■■□□□ 1.69
CLN8-206ENST00000523237 KANK4Q5T7N3 995 aaPredicted RBP25.58■■□□□ 1.69
CLN8-206ENST00000523237 CCDC141Q6ZP82 1450 aa25.58■■□□□ 1.69
CLN8-206ENST00000523237 CNTLNQ9NXG0 1405 aa25.56■■□□□ 1.68
CLN8-206ENST00000523237 RSPH4AQ5TD94 716 aa25.56■■□□□ 1.68
CLN8-206ENST00000523237 APLP2Q06481 763 aa25.55■■□□□ 1.68
CLN8-206ENST00000523237 SETD1BQ9UPS6 1966 aaKnown RBP25.55■■□□□ 1.68
CLN8-206ENST00000523237 ARHGEF5Q12774 1597 aa25.53■■□□□ 1.68
CLN8-206ENST00000523237 MROH2AA6NES4 1674 aa25.53■■□□□ 1.68
CLN8-206ENST00000523237 HSPA2P54652 639 aa25.52■■□□□ 1.68
CLN8-206ENST00000523237 MYOM3Q5VTT5 1437 aa25.5■■□□□ 1.67
CLN8-206ENST00000523237 MIA2Q96PC5 1412 aa25.48■■□□□ 1.67
CLN8-206ENST00000523237 CLTCQ00610 1675 aaKnown RBP25.48■■□□□ 1.67
CLN8-206ENST00000523237 UHRF1BP1Q6BDS2 1440 aa25.47■■□□□ 1.67
CLN8-206ENST00000523237 DHX29Q7Z478 1369 aaKnown RBP25.46■■□□□ 1.67
CLN8-206ENST00000523237 TSPY4P0CV99 314 aa25.46■■□□□ 1.67
CLN8-206ENST00000523237 TSPY10P0CW01 314 aa25.46■■□□□ 1.67
CLN8-206ENST00000523237 GGT6Q6P531 493 aa25.45■■□□□ 1.66
CLN8-206ENST00000523237 ZMYM3Q14202 1370 aa25.43■■□□□ 1.66
CLN8-206ENST00000523237 PPP6R1Q9UPN7 881 aa25.42■■□□□ 1.66
CLN8-206ENST00000523237 MAST1Q9Y2H9 1570 aa25.41■■□□□ 1.66
CLN8-206ENST00000523237 NPATQ14207 1427 aa25.4■■□□□ 1.66
CLN8-206ENST00000523237 KIF3BO15066 747 aa25.37■■□□□ 1.65
CLN8-206ENST00000523237 PTPN23Q9H3S7 1636 aa25.36■■□□□ 1.65
CLN8-206ENST00000523237 ILDR1Q86SU0 546 aaPredicted RBP25.35■■□□□ 1.65
CLN8-206ENST00000523237 STRCQ7RTU9 1775 aa25.33■■□□□ 1.65
CLN8-206ENST00000523237 FAM135AQ9P2D6 1515 aa25.33■■□□□ 1.65
CLN8-206ENST00000523237 CROCC2H7BZ55 1655 aa25.32■■□□□ 1.64
CLN8-206ENST00000523237 KDM5DQ9BY66 1539 aa25.31■■□□□ 1.64
CLN8-206ENST00000523237 PTPRKQ15262 1439 aa25.3■■□□□ 1.64
CLN8-206ENST00000523237 FGD6Q6ZV73 1430 aa25.3■■□□□ 1.64
CLN8-206ENST00000523237 MYO3AQ8NEV4 1616 aa25.29■■□□□ 1.64
CLN8-206ENST00000523237 EIF2AK4Q9P2K8 1649 aaKnown RBP25.28■■□□□ 1.64
Retrieved 100 of 20,778 RNA–protein pairs in 54.2 ms