RNA–Protein interactions for RNA: ENST00000522959.5

ARFGAP1-216, Transcript of ADP ribosylation factor GTPase activating protein 1, humanhuman

TSL 2

Gene ARFGAP1, Length 556 nt, Biotype retained intron, Subcellular localisation Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ARFGAP1-216ENST00000522959 YEATS2Q9ULM3 1422 aa25.24■■□□□ 1.63
ARFGAP1-216ENST00000522959 BCORL1Q5H9F3 1711 aa25.23■■□□□ 1.63
ARFGAP1-216ENST00000522959 CCDC18Q5T9S5 1454 aa25.23■■□□□ 1.63
ARFGAP1-216ENST00000522959 CDC42BPAQ5VT25 1732 aa25.21■■□□□ 1.63
ARFGAP1-216ENST00000522959 LOC105371045A0A1W2PR82 267 aa25.19■■□□□ 1.62
ARFGAP1-216ENST00000522959 EFCAB2Q5VUJ9 269 aa25.19■■□□□ 1.62
ARFGAP1-216ENST00000522959 POGZQ7Z3K3 1410 aa25.19■■□□□ 1.62
ARFGAP1-216ENST00000522959 PREX2Q70Z35 1606 aa25.18■■□□□ 1.62
ARFGAP1-216ENST00000522959 ARHGAP5Q13017 1502 aa25.17■■□□□ 1.62
ARFGAP1-216ENST00000522959 CEP162Q5TB80 1403 aa25.16■■□□□ 1.62
ARFGAP1-216ENST00000522959 MADDQ8WXG6 1647 aa25.15■■□□□ 1.62
ARFGAP1-216ENST00000522959 ZFYVE16Q7Z3T8 1539 aa25.15■■□□□ 1.62
ARFGAP1-216ENST00000522959 ARHGEF12Q9NZN5 1544 aa25.14■■□□□ 1.62
ARFGAP1-216ENST00000522959 HECW2Q9P2P5 1572 aa25.13■■□□□ 1.61
ARFGAP1-216ENST00000522959 AFAP1Q8N556 730 aa25.11■■□□□ 1.61
ARFGAP1-216ENST00000522959 PTPRMP28827 1452 aa25.1■■□□□ 1.61
ARFGAP1-216ENST00000522959 MAGI2Q86UL8 1455 aa25.1■■□□□ 1.61
ARFGAP1-216ENST00000522959 ARID4BQ4LE39 1312 aaPredicted RBP25.1■■□□□ 1.61
ARFGAP1-216ENST00000522959 KDM5CP41229 1560 aa25.1■■□□□ 1.61
ARFGAP1-216ENST00000522959 ITSN2Q9NZM3 1697 aa25.09■■□□□ 1.61
ARFGAP1-216ENST00000522959 RIMS1Q86UR5 1692 aaKnown RBP25.08■■□□□ 1.61
ARFGAP1-216ENST00000522959 ABCC1P33527 1531 aa25.07■■□□□ 1.6
ARFGAP1-216ENST00000522959 TRAPPC8Q9Y2L5 1435 aa25.06■■□□□ 1.6
ARFGAP1-216ENST00000522959 GPATCH8Q9UKJ3 1502 aaKnown RBP25.06■■□□□ 1.6
ARFGAP1-216ENST00000522959 ZNF518AQ6AHZ1 1483 aa25.04■■□□□ 1.6
ARFGAP1-216ENST00000522959 SAMD9LQ8IVG5 1584 aa25.04■■□□□ 1.6
ARFGAP1-216ENST00000522959 ATP10AO60312 1499 aa25.02■■□□□ 1.6
ARFGAP1-216ENST00000522959 DIP2CQ9Y2E4 1556 aa25.01■■□□□ 1.59
ARFGAP1-216ENST00000522959 ABCA6Q8N139 1617 aa25.01■■□□□ 1.59
ARFGAP1-216ENST00000522959 KIDINS220Q9ULH0 1771 aa25■■□□□ 1.59
ARFGAP1-216ENST00000522959 MLECQ14165 292 aa24.98■■□□□ 1.59
ARFGAP1-216ENST00000522959 FER1L4A9Z1Z3 1794 aa24.98■■□□□ 1.59
ARFGAP1-216ENST00000522959 C9orf84Q5VXU9 1444 aa24.97■■□□□ 1.59
ARFGAP1-216ENST00000522959 MLH3Q9UHC1 1453 aa24.96■■□□□ 1.59
ARFGAP1-216ENST00000522959 ZNF777Q9ULD5 760 aaPredicted RBP24.95■■□□□ 1.58
ARFGAP1-216ENST00000522959 TIAM1Q13009 1591 aa24.95■■□□□ 1.58
ARFGAP1-216ENST00000522959 MTUS2Q5JR59 1369 aa24.94■■□□□ 1.58
ARFGAP1-216ENST00000522959 SYCP2Q9BX26 1530 aa24.94■■□□□ 1.58
ARFGAP1-216ENST00000522959 HNRNPMP52272 730 aaKnown RBP eCLIP24.93■■□□□ 1.58
ARFGAP1-216ENST00000522959 EHBP1L1Q8N3D4 1523 aa24.91■■□□□ 1.58
ARFGAP1-216ENST00000522959 CCNB3Q8WWL7 1395 aa24.9■■□□□ 1.58
ARFGAP1-216ENST00000522959 ZNF644Q9H582 1327 aaPredicted RBP24.89■■□□□ 1.58
ARFGAP1-216ENST00000522959 REREQ9P2R6 1566 aa24.89■■□□□ 1.58
ARFGAP1-216ENST00000522959 PLPPR3Q6T4P5 718 aa24.88■■□□□ 1.57
ARFGAP1-216ENST00000522959 CFDP1Q9UEE9 299 aaPredicted RBP24.87■■□□□ 1.57
ARFGAP1-216ENST00000522959 MYT1LQ9UL68 1186 aa24.87■■□□□ 1.57
ARFGAP1-216ENST00000522959 VPS8Q8N3P4 1428 aa24.86■■□□□ 1.57
ARFGAP1-216ENST00000522959 LMTK3Q96Q04 1460 aa24.85■■□□□ 1.57
ARFGAP1-216ENST00000522959 KIAA1107Q9UPP5 1409 aa24.83■■□□□ 1.57
ARFGAP1-216ENST00000522959 CEBPAP49715 358 aaPredicted RBP24.82■■□□□ 1.56
ARFGAP1-216ENST00000522959 NCOA2Q15596 1464 aa24.82■■□□□ 1.56
ARFGAP1-216ENST00000522959 SUPT6HQ7KZ85 1726 aaKnown RBP24.81■■□□□ 1.56
ARFGAP1-216ENST00000522959 INO80Q9ULG1 1556 aaPredicted RBP24.81■■□□□ 1.56
ARFGAP1-216ENST00000522959 MBD5Q9P267 1494 aa24.8■■□□□ 1.56
ARFGAP1-216ENST00000522959 AGLP35573 1532 aa24.8■■□□□ 1.56
ARFGAP1-216ENST00000522959 ATP7AQ04656 1500 aa24.78■■□□□ 1.56
ARFGAP1-216ENST00000522959 KANK4Q5T7N3 995 aaPredicted RBP24.78■■□□□ 1.56
ARFGAP1-216ENST00000522959 SPAG9O60271 1321 aaKnown RBP24.78■■□□□ 1.56
ARFGAP1-216ENST00000522959 LRRC9Q6ZRR7 1453 aa24.76■■□□□ 1.55
ARFGAP1-216ENST00000522959 PLEKHH2Q8IVE3 1493 aa24.76■■□□□ 1.55
ARFGAP1-216ENST00000522959 C3P01024 1663 aa24.75■■□□□ 1.55
ARFGAP1-216ENST00000522959 HSPA2P54652 639 aa24.74■■□□□ 1.55
ARFGAP1-216ENST00000522959 PLXNC1O60486 1568 aa24.71■■□□□ 1.55
ARFGAP1-216ENST00000522959 SETD1BQ9UPS6 1966 aaKnown RBP24.71■■□□□ 1.55
ARFGAP1-216ENST00000522959 CAMSAP2Q08AD1 1489 aa24.7■■□□□ 1.54
ARFGAP1-216ENST00000522959 MAP3K1Q13233 1512 aa24.69■■□□□ 1.54
ARFGAP1-216ENST00000522959 ADGBQ8N7X0 1667 aa24.69■■□□□ 1.54
ARFGAP1-216ENST00000522959 PREX1Q8TCU6 1659 aa24.69■■□□□ 1.54
ARFGAP1-216ENST00000522959 A2MP01023 1474 aa24.66■■□□□ 1.54
ARFGAP1-216ENST00000522959 ILDR1Q86SU0 546 aaPredicted RBP24.63■■□□□ 1.53
ARFGAP1-216ENST00000522959 CLTCQ00610 1675 aaKnown RBP24.62■■□□□ 1.53
ARFGAP1-216ENST00000522959 RTEL1-TNFRSF6BF6WH68 1400 aa24.61■■□□□ 1.53
ARFGAP1-216ENST00000522959 STRCQ7RTU9 1775 aa24.6■■□□□ 1.53
ARFGAP1-216ENST00000522959 MROH2AA6NES4 1674 aa24.6■■□□□ 1.53
ARFGAP1-216ENST00000522959 CCDC141Q6ZP82 1450 aa24.6■■□□□ 1.53
ARFGAP1-216ENST00000522959 ARHGEF5Q12774 1597 aa24.59■■□□□ 1.53
ARFGAP1-216ENST00000522959 DHX29Q7Z478 1369 aaKnown RBP24.54■■□□□ 1.52
ARFGAP1-216ENST00000522959 GGT6Q6P531 493 aa24.54■■□□□ 1.52
ARFGAP1-216ENST00000522959 ZMYM3Q14202 1370 aa24.54■■□□□ 1.52
ARFGAP1-216ENST00000522959 MYOM3Q5VTT5 1437 aa24.53■■□□□ 1.52
ARFGAP1-216ENST00000522959 CNTLNQ9NXG0 1405 aa24.53■■□□□ 1.52
ARFGAP1-216ENST00000522959 ESF1Q9H501 851 aaKnown RBP24.52■■□□□ 1.52
ARFGAP1-216ENST00000522959 UHRF1BP1Q6BDS2 1440 aa24.5■■□□□ 1.51
ARFGAP1-216ENST00000522959 RSPH4AQ5TD94 716 aa24.49■■□□□ 1.51
ARFGAP1-216ENST00000522959 MIA2Q96PC5 1412 aa24.48■■□□□ 1.51
ARFGAP1-216ENST00000522959 MAST1Q9Y2H9 1570 aa24.48■■□□□ 1.51
ARFGAP1-216ENST00000522959 KIF3BO15066 747 aa24.45■■□□□ 1.5
ARFGAP1-216ENST00000522959 PTPRKQ15262 1439 aa24.44■■□□□ 1.5
ARFGAP1-216ENST00000522959 PTPN23Q9H3S7 1636 aa24.44■■□□□ 1.5
ARFGAP1-216ENST00000522959 NPATQ14207 1427 aa24.43■■□□□ 1.5
ARFGAP1-216ENST00000522959 TSPY4P0CV99 314 aa24.42■■□□□ 1.5
ARFGAP1-216ENST00000522959 TSPY10P0CW01 314 aa24.42■■□□□ 1.5
ARFGAP1-216ENST00000522959 CROCC2H7BZ55 1655 aa24.42■■□□□ 1.5
ARFGAP1-216ENST00000522959 MYO3AQ8NEV4 1616 aa24.4■■□□□ 1.5
ARFGAP1-216ENST00000522959 PPP6R1Q9UPN7 881 aa24.39■■□□□ 1.49
ARFGAP1-216ENST00000522959 ABCC5O15440 1437 aa24.38■■□□□ 1.49
ARFGAP1-216ENST00000522959 APLP2Q06481 763 aa24.38■■□□□ 1.49
ARFGAP1-216ENST00000522959 ZNF142P52746 1687 aaPredicted RBP24.37■■□□□ 1.49
ARFGAP1-216ENST00000522959 FGD6Q6ZV73 1430 aa24.36■■□□□ 1.49
ARFGAP1-216ENST00000522959 MROH1Q8NDA8 1641 aa24.36■■□□□ 1.49
Retrieved 100 of 20,778 RNA–protein pairs in 58.7 ms